RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 EDARADDQ8WWZ3 215 aa18.34■□□□□ 0.53
ATG4D-209ENST00000588857 TMEM230Q96A57 120 aa18.34■□□□□ 0.53
ATG4D-209ENST00000588857 PARP12Q9H0J9 701 aaKnown RBP18.34■□□□□ 0.53
ATG4D-209ENST00000588857 ZNF221Q9UK13 617 aa18.34■□□□□ 0.53
ATG4D-209ENST00000588857 ITGB1BP2Q9UKP3 347 aa18.34■□□□□ 0.53
ATG4D-209ENST00000588857 GPR31O00270 319 aa18.34■□□□□ 0.53
ATG4D-209ENST00000588857 PHF1O43189 567 aaPredicted RBP18.34■□□□□ 0.53
ATG4D-209ENST00000588857 YPEL1O60688 119 aa18.34■□□□□ 0.53
ATG4D-209ENST00000588857 NFYBP25208 207 aa18.34■□□□□ 0.53
ATG4D-209ENST00000588857 DHRS2Q13268 280 aa18.34■□□□□ 0.53
ATG4D-209ENST00000588857 MORN2Q502X0 79 aa18.34■□□□□ 0.53
ATG4D-209ENST00000588857 PHLDA2Q53GA4 152 aa18.34■□□□□ 0.53
ATG4D-209ENST00000588857 PRAMEF5Q5TYX0 476 aa18.34■□□□□ 0.53
ATG4D-209ENST00000588857 C11orf88Q6PI97 169 aa18.34■□□□□ 0.53
ATG4D-209ENST00000588857 LYG2Q86SG7 212 aa18.34■□□□□ 0.53
ATG4D-209ENST00000588857 LURAP1LQ8IV03 231 aa18.34■□□□□ 0.53
ATG4D-209ENST00000588857 CMTM1Q8IZ96 169 aa18.34■□□□□ 0.53
ATG4D-209ENST00000588857 OR52M1Q8NGK5 317 aa18.34■□□□□ 0.53
ATG4D-209ENST00000588857 C10orf105Q8TEF2 133 aa18.34■□□□□ 0.53
ATG4D-209ENST00000588857 YPEL2Q96QA6 119 aa18.34■□□□□ 0.53
ATG4D-209ENST00000588857 CCL28Q9NRJ3 127 aa18.34■□□□□ 0.53
ATG4D-209ENST00000588857 SLC2A9Q9NRM0 540 aa18.34■□□□□ 0.53
ATG4D-209ENST00000588857 GFOD1Q9NXC2 390 aa18.34■□□□□ 0.53
ATG4D-209ENST00000588857 RPUSD1Q9UJJ7 312 aaKnown RBP18.34■□□□□ 0.53
ATG4D-209ENST00000588857 AKAP9Q99996 3911 aa18.33■□□□□ 0.53
ATG4D-209ENST00000588857 OTOGQ6ZRI0 2925 aa18.33■□□□□ 0.52
ATG4D-209ENST00000588857 TEX13DA0A0J9YY54 714 aaPredicted RBP18.33■□□□□ 0.52
ATG4D-209ENST00000588857 C9orf170A2RU37 121 aa18.33■□□□□ 0.52
ATG4D-209ENST00000588857 HMX3A6NHT5 357 aa18.33■□□□□ 0.52
ATG4D-209ENST00000588857 HSD17B6O14756 317 aa18.33■□□□□ 0.52
ATG4D-209ENST00000588857 IGHV2-5P01817 119 aa18.33■□□□□ 0.52
ATG4D-209ENST00000588857 S100GP29377 79 aa18.33■□□□□ 0.52
ATG4D-209ENST00000588857 DSCR9P59020 149 aa18.33■□□□□ 0.52
ATG4D-209ENST00000588857 RRAS2P62070 204 aaPredicted RBP18.33■□□□□ 0.52
ATG4D-209ENST00000588857 DHODHQ02127 395 aa18.33■□□□□ 0.52
ATG4D-209ENST00000588857 CD276Q5ZPR3 534 aa18.33■□□□□ 0.52
ATG4D-209ENST00000588857 HEPN1Q6WQI6 88 aa18.33■□□□□ 0.52
ATG4D-209ENST00000588857 SGPP2Q8IWX5 399 aa18.33■□□□□ 0.52
ATG4D-209ENST00000588857 KCNS2Q9ULS6 477 aa18.33■□□□□ 0.52
ATG4D-209ENST00000588857 PPIAL4CA0A0B4J2A2 164 aa18.32■□□□□ 0.52
ATG4D-209ENST00000588857 PPIAL4GP0DN37 164 aa18.32■□□□□ 0.52
ATG4D-209ENST00000588857 DNASE1P24855 282 aa18.32■□□□□ 0.52
ATG4D-209ENST00000588857 C11orf91Q3C1V1 193 aa18.32■□□□□ 0.52
ATG4D-209ENST00000588857 ZNF818PQ6ZRF7 136 aa18.32■□□□□ 0.52
ATG4D-209ENST00000588857 LDLRAD3Q86YD5 345 aa18.32■□□□□ 0.52
ATG4D-209ENST00000588857 OR2AK2Q8NG84 335 aa18.32■□□□□ 0.52
ATG4D-209ENST00000588857 C8orf46Q8TAG6 207 aa18.32■□□□□ 0.52
ATG4D-209ENST00000588857 CHAC2Q8WUX2 184 aa18.32■□□□□ 0.52
ATG4D-209ENST00000588857 RTN4IP1Q8WWV3 396 aaPredicted RBP18.32■□□□□ 0.52
ATG4D-209ENST00000588857 RAB39BQ96DA2 213 aa18.32■□□□□ 0.52
ATG4D-209ENST00000588857 LOC105371242A0A075B767 164 aa18.31■□□□□ 0.52
ATG4D-209ENST00000588857 TRAPPC2P0DI81 140 aa18.31■□□□□ 0.52
ATG4D-209ENST00000588857 TRAPPC2BP0DI82 140 aa18.31■□□□□ 0.52
ATG4D-209ENST00000588857 CLDND2Q8NHS1 167 aa18.31■□□□□ 0.52
ATG4D-209ENST00000588857 CASTOR1Q8WTX7 329 aa18.31■□□□□ 0.52
ATG4D-209ENST00000588857 FAM216AQ8WUB2 273 aa18.31■□□□□ 0.52
ATG4D-209ENST00000588857 BEX4Q9NWD9 120 aaPredicted RBP18.31■□□□□ 0.52
ATG4D-209ENST00000588857 CRYM-AS1A6NIL9 109 aa18.3■□□□□ 0.52
ATG4D-209ENST00000588857 MMP23AO75900 390 aa18.3■□□□□ 0.52
ATG4D-209ENST00000588857 SFT2D2O95562 160 aa18.3■□□□□ 0.52
ATG4D-209ENST00000588857 UXS1Q8NBZ7 420 aa18.3■□□□□ 0.52
ATG4D-209ENST00000588857 BVESQ8NE79 360 aa18.3■□□□□ 0.52
ATG4D-209ENST00000588857 AKR1E2Q96JD6 320 aa18.3■□□□□ 0.52
ATG4D-209ENST00000588857 OR2D2Q9H210 308 aa18.3■□□□□ 0.52
ATG4D-209ENST00000588857 RNF150Q9ULK6 438 aa18.3■□□□□ 0.52
ATG4D-209ENST00000588857 PSG11Q9UQ72 335 aa18.3■□□□□ 0.52
ATG4D-209ENST00000588857 KCNIP3Q9Y2W7 256 aa18.3■□□□□ 0.52
ATG4D-209ENST00000588857 DUS4LO95620 317 aaKnown RBP18.3■□□□□ 0.52
ATG4D-209ENST00000588857 IGHV3-7P01780 117 aa18.3■□□□□ 0.52
ATG4D-209ENST00000588857 LIPFP07098 398 aa18.3■□□□□ 0.52
ATG4D-209ENST00000588857 DLX6P56179 175 aa18.3■□□□□ 0.52
ATG4D-209ENST00000588857 RND3P61587 244 aa18.3■□□□□ 0.52
ATG4D-209ENST00000588857 C12orf45Q8N5I9 185 aaPredicted RBP18.3■□□□□ 0.52
ATG4D-209ENST00000588857 ZNF645Q8N7E2 425 aa18.3■□□□□ 0.52
ATG4D-209ENST00000588857 VWC2LB2RUY7 222 aa18.29■□□□□ 0.52
ATG4D-209ENST00000588857 C22orf46C9J442 243 aa18.29■□□□□ 0.52
ATG4D-209ENST00000588857 MPPED1O15442 326 aa18.29■□□□□ 0.52
ATG4D-209ENST00000588857 SLC22A5O76082 557 aa18.29■□□□□ 0.52
ATG4D-209ENST00000588857 IFNA2P01563 188 aa18.29■□□□□ 0.52
ATG4D-209ENST00000588857 CD34P28906 385 aa18.29■□□□□ 0.52
ATG4D-209ENST00000588857 LMO4P61968 165 aa18.29■□□□□ 0.52
ATG4D-209ENST00000588857 SUPT4H1P63272 117 aaKnown RBP18.29■□□□□ 0.52
ATG4D-209ENST00000588857 SLC9A3R2Q15599 337 aa18.29■□□□□ 0.52
ATG4D-209ENST00000588857 LY6G6FQ5SQ64 297 aa18.29■□□□□ 0.52
ATG4D-209ENST00000588857 AKAP14Q86UN6 197 aa18.29■□□□□ 0.52
ATG4D-209ENST00000588857 LY6G5BQ8NDX9 201 aa18.29■□□□□ 0.52
ATG4D-209ENST00000588857 LEAP2Q969E1 77 aa18.29■□□□□ 0.52
ATG4D-209ENST00000588857 PHB2Q99623 299 aa18.29■□□□□ 0.52
ATG4D-209ENST00000588857 NAA60Q9H7X0 242 aa18.29■□□□□ 0.52
ATG4D-209ENST00000588857 ARHGAP32A7KAX9 2087 aa18.29■□□□□ 0.52
ATG4D-209ENST00000588857 hCG_1809904A0A1W2PP81 198 aa18.28■□□□□ 0.52
ATG4D-209ENST00000588857 A0A1W2PPE2 198 aa18.28■□□□□ 0.52
ATG4D-209ENST00000588857 A0A1W2PR64 198 aa18.28■□□□□ 0.52
ATG4D-209ENST00000588857 A0A1W2PRV1 198 aa18.28■□□□□ 0.52
ATG4D-209ENST00000588857 C17orf98A8MV24 154 aa18.28■□□□□ 0.52
ATG4D-209ENST00000588857 ITGB1BP1O14713 200 aa18.28■□□□□ 0.52
ATG4D-209ENST00000588857 ST8SIA5O15466 376 aa18.28■□□□□ 0.52
ATG4D-209ENST00000588857 ANXA3P12429 323 aa18.28■□□□□ 0.52
ATG4D-209ENST00000588857 RAB7AP51149 207 aa18.28■□□□□ 0.52
ATG4D-209ENST00000588857 ERVFRD-1P60508 538 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms