RNA–Protein interactions for RNA: ENST00000587730.5

DDX39A-206, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,813 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-206ENST00000587730 IGKV1D-39P04432 117 aa15.75■□□□□ 0.11
DDX39A-206ENST00000587730 SPINK14Q6IE38 97 aa15.75■□□□□ 0.11
DDX39A-206ENST00000587730 NUFIP2Q7Z417 695 aaKnown RBP15.75■□□□□ 0.11
DDX39A-206ENST00000587730 TAF15Q92804 592 aaKnown RBP eCLIP15.75■□□□□ 0.11
DDX39A-206ENST00000587730 RSG1Q9BU20 258 aa15.75■□□□□ 0.11
DDX39A-206ENST00000587730 MAP1LC3BQ9GZQ8 125 aa15.75■□□□□ 0.11
DDX39A-206ENST00000587730 ZNF665Q9H7R5 613 aa15.75■□□□□ 0.11
DDX39A-206ENST00000587730 TRAPPC2LQ9UL33 140 aa15.75■□□□□ 0.11
DDX39A-206ENST00000587730 SH2D1BO14796 132 aa15.75■□□□□ 0.11
DDX39A-206ENST00000587730 IGKV1-5P01602 117 aa15.75■□□□□ 0.11
DDX39A-206ENST00000587730 METTL15P1P0C7V9 234 aa15.75■□□□□ 0.11
DDX39A-206ENST00000587730 LCN15Q6UWW0 184 aa15.75■□□□□ 0.11
DDX39A-206ENST00000587730 Q6ZRM9 215 aa15.75■□□□□ 0.11
DDX39A-206ENST00000587730 HIST3H2BBQ8N257 126 aa15.75■□□□□ 0.11
DDX39A-206ENST00000587730 EDARADDQ8WWZ3 215 aa15.75■□□□□ 0.11
DDX39A-206ENST00000587730 GFOD1Q9NXC2 390 aa15.75■□□□□ 0.11
DDX39A-206ENST00000587730 KCNS2Q9ULS6 477 aa15.75■□□□□ 0.11
DDX39A-206ENST00000587730 PI4KAP42356 2102 aa15.74■□□□□ 0.11
DDX39A-206ENST00000587730 IFITM10A6NMD0 228 aa15.74■□□□□ 0.11
DDX39A-206ENST00000587730 LY86O95711 162 aa15.74■□□□□ 0.11
DDX39A-206ENST00000587730 IGLV2-14P01704 120 aa15.74■□□□□ 0.11
DDX39A-206ENST00000587730 TRGC2P03986 189 aa15.74■□□□□ 0.11
DDX39A-206ENST00000587730 PYY3Q5JQD4 70 aa15.74■□□□□ 0.11
DDX39A-206ENST00000587730 OR2B11Q5JQS5 317 aa15.74■□□□□ 0.11
DDX39A-206ENST00000587730 OR2T2Q6IF00 324 aa15.74■□□□□ 0.11
DDX39A-206ENST00000587730 CYP2G1PQ6ZSU1 146 aa15.74■□□□□ 0.11
DDX39A-206ENST00000587730 C1orf210Q8IVY1 113 aa15.74■□□□□ 0.11
DDX39A-206ENST00000587730 TTTY12Q9BZ98 90 aa15.74■□□□□ 0.11
DDX39A-206ENST00000587730 SLC39A9Q9NUM3 307 aa15.74■□□□□ 0.11
DDX39A-206ENST00000587730 KCNIP1Q9NZI2 227 aa15.74■□□□□ 0.11
DDX39A-206ENST00000587730 OR1A1Q9P1Q5 309 aa15.74■□□□□ 0.11
DDX39A-206ENST00000587730 PITPNC1Q9UKF7 332 aa15.74■□□□□ 0.11
DDX39A-206ENST00000587730 LAMA1P25391 3075 aa15.74■□□□□ 0.11
DDX39A-206ENST00000587730 SDK1Q7Z5N4 2213 aa15.73■□□□□ 0.11
DDX39A-206ENST00000587730 ZNF503-AS2A6NEH8 195 aa15.73■□□□□ 0.11
DDX39A-206ENST00000587730 OR5H1A6NKK0 313 aa15.73■□□□□ 0.11
DDX39A-206ENST00000587730 C21orf140B9A014 251 aa15.73■□□□□ 0.11
DDX39A-206ENST00000587730 LAMTOR5O43504 91 aa15.73■□□□□ 0.11
DDX39A-206ENST00000587730 SOX15O60248 233 aa15.73■□□□□ 0.11
DDX39A-206ENST00000587730 ERVK11-1P61568 191 aa15.73■□□□□ 0.11
DDX39A-206ENST00000587730 SLC38A11Q08AI6 406 aa15.73■□□□□ 0.11
DDX39A-206ENST00000587730 GABRA6Q16445 453 aa15.73■□□□□ 0.11
DDX39A-206ENST00000587730 TBC1D28Q2M2D7 210 aa15.73■□□□□ 0.11
DDX39A-206ENST00000587730 TMEM14EPQ6UXP3 125 aa15.73■□□□□ 0.11
DDX39A-206ENST00000587730 C5orf24Q7Z6I8 188 aa15.73■□□□□ 0.11
DDX39A-206ENST00000587730 TGIF2LYQ8IUE0 185 aa15.73■□□□□ 0.11
DDX39A-206ENST00000587730 OR1K1Q8NGR3 316 aa15.73■□□□□ 0.11
DDX39A-206ENST00000587730 CIB3Q96Q77 187 aaPredicted RBP15.73■□□□□ 0.11
DDX39A-206ENST00000587730 BCL2L14Q9BZR8 327 aa15.73■□□□□ 0.11
DDX39A-206ENST00000587730 MANBALQ9NQG1 85 aa15.73■□□□□ 0.11
DDX39A-206ENST00000587730 PPP1R3CQ9UQK1 317 aa15.73■□□□□ 0.11
DDX39A-206ENST00000587730 CEBPZOSA8MTT3 80 aa15.73■□□□□ 0.11
DDX39A-206ENST00000587730 SLC33A1O00400 549 aaPredicted RBP15.73■□□□□ 0.11
DDX39A-206ENST00000587730 IAPPP10997 89 aa15.73■□□□□ 0.11
DDX39A-206ENST00000587730 HIST1H1BP16401 226 aaKnown RBP15.73■□□□□ 0.11
DDX39A-206ENST00000587730 WNT5AP41221 380 aa15.73■□□□□ 0.11
DDX39A-206ENST00000587730 PSMB3P49720 205 aa15.73■□□□□ 0.11
DDX39A-206ENST00000587730 ZNF146Q15072 292 aa15.73■□□□□ 0.11
DDX39A-206ENST00000587730 OR1C1Q15619 314 aa15.73■□□□□ 0.11
DDX39A-206ENST00000587730 ZNF726P1Q15940 193 aa15.73■□□□□ 0.11
DDX39A-206ENST00000587730 ZNF585BQ52M93 769 aa15.73■□□□□ 0.11
DDX39A-206ENST00000587730 TIPARPQ7Z3E1 657 aaKnown RBP15.73■□□□□ 0.11
DDX39A-206ENST00000587730 LINC00469Q8N7U9 141 aa15.73■□□□□ 0.11
DDX39A-206ENST00000587730 LHX4Q969G2 390 aa15.73■□□□□ 0.11
DDX39A-206ENST00000587730 ZNF488Q96MN9 340 aa15.73■□□□□ 0.11
DDX39A-206ENST00000587730 HSPB7Q9UBY9 170 aa15.73■□□□□ 0.11
DDX39A-206ENST00000587730 LAMP3Q9UQV4 416 aa15.73■□□□□ 0.11
DDX39A-206ENST00000587730 KLF13Q9Y2Y9 288 aaPredicted RBP15.73■□□□□ 0.11
DDX39A-206ENST00000587730 TMEM210A6NLX4 147 aa15.72■□□□□ 0.11
DDX39A-206ENST00000587730 ZNF737O75373 536 aa15.72■□□□□ 0.11
DDX39A-206ENST00000587730 OR2H2O95918 312 aa15.72■□□□□ 0.11
DDX39A-206ENST00000587730 ZNF883P0CG24 379 aa15.72■□□□□ 0.11
DDX39A-206ENST00000587730 SELEP16581 610 aa15.72■□□□□ 0.11
DDX39A-206ENST00000587730 CA6P23280 308 aa15.72■□□□□ 0.11
DDX39A-206ENST00000587730 MEF2BQ02080 365 aaPredicted RBP15.72■□□□□ 0.11
DDX39A-206ENST00000587730 PLGLB1Q02325 96 aa15.72■□□□□ 0.11
DDX39A-206ENST00000587730 TNFRSF9Q07011 255 aa15.72■□□□□ 0.11
DDX39A-206ENST00000587730 CATR1Q13166 79 aa15.72■□□□□ 0.11
DDX39A-206ENST00000587730 TMEM241Q24JQ0 296 aa15.72■□□□□ 0.11
DDX39A-206ENST00000587730 OR10A7Q8NGE5 316 aa15.72■□□□□ 0.11
DDX39A-206ENST00000587730 BCL2L2Q92843 193 aaPredicted RBP15.72■□□□□ 0.11
DDX39A-206ENST00000587730 OR4C12Q96R67 309 aa15.72■□□□□ 0.11
DDX39A-206ENST00000587730 TMEM147Q9BVK8 224 aa15.72■□□□□ 0.11
DDX39A-206ENST00000587730 SRD5A3Q9H8P0 318 aa15.72■□□□□ 0.11
DDX39A-206ENST00000587730 FRYLO94915 3013 aa15.72■□□□□ 0.11
DDX39A-206ENST00000587730 WDR87Q6ZQQ6 2873 aa15.71■□□□□ 0.11
DDX39A-206ENST00000587730 TRGC1P0CF51 173 aa15.71■□□□□ 0.11
DDX39A-206ENST00000587730 RAC2P15153 192 aa15.71■□□□□ 0.11
DDX39A-206ENST00000587730 SPANXN5Q5MJ07 72 aa15.71■□□□□ 0.11
DDX39A-206ENST00000587730 CDCP2Q5VXM1 449 aa15.71■□□□□ 0.11
DDX39A-206ENST00000587730 WDR25Q64LD2 544 aaPredicted RBP15.71■□□□□ 0.11
DDX39A-206ENST00000587730 NCR3LG1Q68D85 454 aa15.71■□□□□ 0.11
DDX39A-206ENST00000587730 HAPLN4Q86UW8 402 aa15.71■□□□□ 0.11
DDX39A-206ENST00000587730 DRAM1Q8N682 238 aa15.71■□□□□ 0.11
DDX39A-206ENST00000587730 TMEM251Q8N6I4 163 aa15.71■□□□□ 0.11
DDX39A-206ENST00000587730 ZNF645Q8N7E2 425 aa15.71■□□□□ 0.11
DDX39A-206ENST00000587730 OR10D4PQ8NGN7 298 aa15.71■□□□□ 0.11
DDX39A-206ENST00000587730 NCKAP5O14513 1909 aa15.71■□□□□ 0.11
DDX39A-206ENST00000587730 CTXND1A0A1B0GTU2 59 aa15.71■□□□□ 0.1
DDX39A-206ENST00000587730 PATE3B3GLJ2 98 aa15.71■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms