RNA–Protein interactions for RNA: ENST00000587525.5

CACNA1A-209, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 1 (best)

Gene CACNA1A, Length 3,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-209ENST00000587525 MAP1LC3BQ9GZQ8 125 aa11.79□□□□□ -0.52
CACNA1A-209ENST00000587525 NCOR2Q9Y618 2525 aa11.79□□□□□ -0.52
CACNA1A-209ENST00000587525 IGF2RP11717 2491 aa11.79□□□□□ -0.52
CACNA1A-209ENST00000587525 TRGV5A0A0B4J1U4 118 aa11.79□□□□□ -0.52
CACNA1A-209ENST00000587525 SH2D1BO14796 132 aa11.79□□□□□ -0.52
CACNA1A-209ENST00000587525 VDAC1P21796 283 aa11.79□□□□□ -0.52
CACNA1A-209ENST00000587525 QRFPP83859 136 aa11.79□□□□□ -0.52
CACNA1A-209ENST00000587525 OR8B8Q15620 311 aa11.79□□□□□ -0.52
CACNA1A-209ENST00000587525 DEFB109BQ30KR1 87 aa11.79□□□□□ -0.52
CACNA1A-209ENST00000587525 C1orf210Q8IVY1 113 aa11.79□□□□□ -0.52
CACNA1A-209ENST00000587525 OR2M7Q8NG81 312 aa11.79□□□□□ -0.52
CACNA1A-209ENST00000587525 FAM173AQ9BQD7 235 aa11.79□□□□□ -0.52
CACNA1A-209ENST00000587525 PLEKHA3Q9HB20 300 aa11.79□□□□□ -0.52
CACNA1A-209ENST00000587525 ZNF391Q9UJN7 358 aa11.79□□□□□ -0.52
CACNA1A-209ENST00000587525 PAM16Q9Y3D7 125 aa11.79□□□□□ -0.52
CACNA1A-209ENST00000587525 DMRT1Q9Y5R6 373 aa11.79□□□□□ -0.52
CACNA1A-209ENST00000587525 KLF7O75840 302 aaPredicted RBP11.78□□□□□ -0.52
CACNA1A-209ENST00000587525 TOX4O94842 621 aa11.78□□□□□ -0.52
CACNA1A-209ENST00000587525 MT-CO3P00414 261 aa11.78□□□□□ -0.52
CACNA1A-209ENST00000587525 CST2P09228 141 aa11.78□□□□□ -0.52
CACNA1A-209ENST00000587525 ERVK-16P61578 105 aa11.78□□□□□ -0.52
CACNA1A-209ENST00000587525 GNPNAT1Q96EK6 184 aaPredicted RBP11.78□□□□□ -0.52
CACNA1A-209ENST00000587525 PNRC2Q9NPJ4 139 aaKnown RBP11.78□□□□□ -0.52
CACNA1A-209ENST00000587525 FOXJ2Q9P0K8 574 aa11.78□□□□□ -0.52
CACNA1A-209ENST00000587525 LTBP2Q14767 1821 aa11.78□□□□□ -0.52
CACNA1A-209ENST00000587525 UBE2CO00762 179 aa11.78□□□□□ -0.52
CACNA1A-209ENST00000587525 SYNGR2O43760 224 aa11.78□□□□□ -0.52
CACNA1A-209ENST00000587525 SOD3P08294 240 aa11.78□□□□□ -0.52
CACNA1A-209ENST00000587525 KRTDAPP60985 99 aa11.78□□□□□ -0.52
CACNA1A-209ENST00000587525 SLC38A11Q08AI6 406 aa11.78□□□□□ -0.52
CACNA1A-209ENST00000587525 MSMO1Q15800 293 aa11.78□□□□□ -0.52
CACNA1A-209ENST00000587525 PPP1R32Q7Z5V6 425 aa11.78□□□□□ -0.52
CACNA1A-209ENST00000587525 OR4A16Q8NH70 328 aa11.78□□□□□ -0.52
CACNA1A-209ENST00000587525 SNIP1Q8TAD8 396 aaKnown RBP11.78□□□□□ -0.52
CACNA1A-209ENST00000587525 MTCH1Q9NZJ7 389 aa11.78□□□□□ -0.52
CACNA1A-209ENST00000587525 ZNF107Q9UII5 783 aaPredicted RBP11.78□□□□□ -0.52
CACNA1A-209ENST00000587525 LOC390937A0A1W2PQ73 354 aa11.78□□□□□ -0.52
CACNA1A-209ENST00000587525 TRDCB7Z8K6 153 aa11.78□□□□□ -0.52
CACNA1A-209ENST00000587525 M0R1X1 148 aa11.78□□□□□ -0.52
CACNA1A-209ENST00000587525 IGLV3-19P01714 112 aa11.78□□□□□ -0.52
CACNA1A-209ENST00000587525 SLC25A6P12236 298 aa11.78□□□□□ -0.52
CACNA1A-209ENST00000587525 LURAP1LQ8IV03 231 aa11.78□□□□□ -0.52
CACNA1A-209ENST00000587525 OR1L1Q8NH94 360 aa11.78□□□□□ -0.52
CACNA1A-209ENST00000587525 EDARADDQ8WWZ3 215 aa11.78□□□□□ -0.52
CACNA1A-209ENST00000587525 PCGF1Q9BSM1 259 aa11.78□□□□□ -0.52
CACNA1A-209ENST00000587525 DENND4AQ7Z401 1863 aa11.78□□□□□ -0.52
CACNA1A-209ENST00000587525 HIST1H2BKO60814 126 aa11.77□□□□□ -0.52
CACNA1A-209ENST00000587525 SRSF10O75494 262 aaKnown RBP11.77□□□□□ -0.52
CACNA1A-209ENST00000587525 HIST1H2BJP06899 126 aa11.77□□□□□ -0.52
CACNA1A-209ENST00000587525 SEC11BP0C7V7 166 aa11.77□□□□□ -0.52
CACNA1A-209ENST00000587525 DANCRP0C864 163 aa11.77□□□□□ -0.52
CACNA1A-209ENST00000587525 HIST1H2BOP23527 126 aa11.77□□□□□ -0.52
CACNA1A-209ENST00000587525 HIST1H2BBP33778 126 aa11.77□□□□□ -0.52
CACNA1A-209ENST00000587525 PMELP40967 661 aa11.77□□□□□ -0.52
CACNA1A-209ENST00000587525 PSMB3P49720 205 aa11.77□□□□□ -0.52
CACNA1A-209ENST00000587525 HIST1H2BDP58876 126 aa11.77□□□□□ -0.52
CACNA1A-209ENST00000587525 HIST1H2BCP62807 126 aa11.77□□□□□ -0.52
CACNA1A-209ENST00000587525 HIST2H2BEQ16778 126 aa11.77□□□□□ -0.52
CACNA1A-209ENST00000587525 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.77□□□□□ -0.52
CACNA1A-209ENST00000587525 OR10P1Q8NGE3 313 aa11.77□□□□□ -0.52
CACNA1A-209ENST00000587525 SLC25A40Q8TBP6 338 aa11.77□□□□□ -0.52
CACNA1A-209ENST00000587525 H1FXQ92522 213 aaKnown RBP11.77□□□□□ -0.52
CACNA1A-209ENST00000587525 HIST1H2BHQ93079 126 aa11.77□□□□□ -0.52
CACNA1A-209ENST00000587525 GPR146Q96CH1 333 aa11.77□□□□□ -0.52
CACNA1A-209ENST00000587525 HIST1H2BNQ99877 126 aa11.77□□□□□ -0.52
CACNA1A-209ENST00000587525 HIST1H2BMQ99879 126 aa11.77□□□□□ -0.52
CACNA1A-209ENST00000587525 TTTY12Q9BZ98 90 aa11.77□□□□□ -0.52
CACNA1A-209ENST00000587525 M0R1B8 84 aa11.77□□□□□ -0.53
CACNA1A-209ENST00000587525 IGHV3-48P01763 117 aa11.77□□□□□ -0.53
CACNA1A-209ENST00000587525 IL13RA2Q14627 380 aa11.77□□□□□ -0.53
CACNA1A-209ENST00000587525 FFAR4Q5NUL3 377 aa11.77□□□□□ -0.53
CACNA1A-209ENST00000587525 MISP3Q96FF7 219 aa11.77□□□□□ -0.53
CACNA1A-209ENST00000587525 BTF3L4Q96K17 158 aa11.77□□□□□ -0.53
CACNA1A-209ENST00000587525 TNCP24821 2201 aa11.77□□□□□ -0.53
CACNA1A-209ENST00000587525 GALR1P47211 349 aa11.77□□□□□ -0.53
CACNA1A-209ENST00000587525 ERVFRD-1P60508 538 aa11.77□□□□□ -0.53
CACNA1A-209ENST00000587525 CATR1Q13166 79 aa11.77□□□□□ -0.53
CACNA1A-209ENST00000587525 DCAF10Q5QP82 559 aa11.77□□□□□ -0.53
CACNA1A-209ENST00000587525 FAM78BQ5VT40 261 aa11.77□□□□□ -0.53
CACNA1A-209ENST00000587525 ETFRF1Q6IPR1 90 aa11.77□□□□□ -0.53
CACNA1A-209ENST00000587525 GALMQ96C23 342 aa11.77□□□□□ -0.53
CACNA1A-209ENST00000587525 TXN2Q99757 166 aa11.77□□□□□ -0.53
CACNA1A-209ENST00000587525 PILRBQ9UKJ0 227 aa11.77□□□□□ -0.53
CACNA1A-209ENST00000587525 SPAARA0A1B0GVQ0 90 aa11.76□□□□□ -0.53
CACNA1A-209ENST00000587525 SYNGR3O43761 229 aa11.76□□□□□ -0.53
CACNA1A-209ENST00000587525 HSPB1P04792 205 aaKnown RBP11.76□□□□□ -0.53
CACNA1A-209ENST00000587525 CD55P08174 381 aa11.76□□□□□ -0.53
CACNA1A-209ENST00000587525 MGST1P10620 155 aaKnown RBP11.76□□□□□ -0.53
CACNA1A-209ENST00000587525 SLC35B1P78383 322 aa11.76□□□□□ -0.53
CACNA1A-209ENST00000587525 C1orf147Q96MC9 270 aaPredicted RBP11.76□□□□□ -0.53
CACNA1A-209ENST00000587525 CRIM1Q9NZV1 1036 aa11.76□□□□□ -0.53
CACNA1A-209ENST00000587525 ENSAO43768 121 aaKnown RBP11.76□□□□□ -0.53
CACNA1A-209ENST00000587525 PPP1CBP62140 327 aa11.76□□□□□ -0.53
CACNA1A-209ENST00000587525 FAM201AQ5SY85 155 aa11.76□□□□□ -0.53
CACNA1A-209ENST00000587525 UNQ6494/PRO21346Q6UXR6 183 aa11.76□□□□□ -0.53
CACNA1A-209ENST00000587525 TMEM222Q9H0R3 208 aa11.76□□□□□ -0.53
CACNA1A-209ENST00000587525 POMT1Q9Y6A1 747 aa11.76□□□□□ -0.53
CACNA1A-209ENST00000587525 RPL36A-HNRNPH2H7BZ11 118 aa11.76□□□□□ -0.53
CACNA1A-209ENST00000587525 TOX3O15405 576 aaPredicted RBP11.76□□□□□ -0.53
CACNA1A-209ENST00000587525 NKX2-8O15522 239 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms