RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 HAND1O96004 215 aa6.47□□□□□ -1.37
VMP1-204ENST00000587259 ADH4P08319 380 aa6.47□□□□□ -1.37
VMP1-204ENST00000587259 PET100P0DJ07 73 aa6.47□□□□□ -1.37
VMP1-204ENST00000587259 IGHV4-38-2P0DP08 117 aa6.47□□□□□ -1.37
VMP1-204ENST00000587259 VSIG10L2P0DP72 767 aa6.47□□□□□ -1.37
VMP1-204ENST00000587259 IRF2P14316 349 aa6.47□□□□□ -1.37
VMP1-204ENST00000587259 VAMP1P23763 118 aa6.47□□□□□ -1.37
VMP1-204ENST00000587259 PRTN3P24158 256 aa6.47□□□□□ -1.37
VMP1-204ENST00000587259 ZBTB25P24278 435 aa6.47□□□□□ -1.37
VMP1-204ENST00000587259 LMO1P25800 156 aa6.47□□□□□ -1.37
VMP1-204ENST00000587259 HLA-DRB3P79483 266 aa6.47□□□□□ -1.37
VMP1-204ENST00000587259 DHODHQ02127 395 aa6.47□□□□□ -1.37
VMP1-204ENST00000587259 CD300CQ08708 224 aa6.47□□□□□ -1.37
VMP1-204ENST00000587259 SLC9A3R2Q15599 337 aa6.47□□□□□ -1.37
VMP1-204ENST00000587259 ABCA11PQ4W5N1 156 aa6.47□□□□□ -1.37
VMP1-204ENST00000587259 C6orf183Q5T699 404 aa6.47□□□□□ -1.37
VMP1-204ENST00000587259 AADACL3Q5VUY0 350 aa6.47□□□□□ -1.37
VMP1-204ENST00000587259 WDR82Q6UXN9 313 aa6.47□□□□□ -1.37
VMP1-204ENST00000587259 WDR86Q86TI4 376 aa6.47□□□□□ -1.37
VMP1-204ENST00000587259 C1QL4Q86Z23 238 aa6.47□□□□□ -1.37
VMP1-204ENST00000587259 SGPP2Q8IWX5 399 aa6.47□□□□□ -1.37
VMP1-204ENST00000587259 GAPTQ8N292 157 aa6.47□□□□□ -1.37
VMP1-204ENST00000587259 OR5M8Q8NGP6 311 aa6.47□□□□□ -1.37
VMP1-204ENST00000587259 OR2T35Q8NGX2 323 aa6.47□□□□□ -1.37
VMP1-204ENST00000587259 MOB3AQ96BX8 217 aa6.47□□□□□ -1.37
VMP1-204ENST00000587259 OR2A7Q96R45 310 aa6.47□□□□□ -1.37
VMP1-204ENST00000587259 GON7Q9BXV9 100 aa6.47□□□□□ -1.37
VMP1-204ENST00000587259 EGLN1Q9GZT9 426 aa6.47□□□□□ -1.37
VMP1-204ENST00000587259 WDR13Q9H1Z4 485 aa6.47□□□□□ -1.37
VMP1-204ENST00000587259 RAB18Q9NP72 206 aa6.47□□□□□ -1.37
VMP1-204ENST00000587259 KCNIP1Q9NZI2 227 aa6.47□□□□□ -1.37
VMP1-204ENST00000587259 COMMD9Q9P000 198 aa6.47□□□□□ -1.37
VMP1-204ENST00000587259 ZNF230Q9UIE0 474 aaPredicted RBP6.47□□□□□ -1.37
VMP1-204ENST00000587259 KCNIP3Q9Y2W7 256 aa6.47□□□□□ -1.37
VMP1-204ENST00000587259 TRAV24A0A0B4J272 114 aa6.46□□□□□ -1.38
VMP1-204ENST00000587259 IGHV3-64DA0A0J9YX35 117 aa6.46□□□□□ -1.38
VMP1-204ENST00000587259 TMEM30CPA0ZSE6 113 aa6.46□□□□□ -1.38
VMP1-204ENST00000587259 LRRC30A6NM36 301 aa6.46□□□□□ -1.38
VMP1-204ENST00000587259 SLC33A1O00400 549 aaPredicted RBP6.46□□□□□ -1.38
VMP1-204ENST00000587259 GOSR2O14653 212 aa6.46□□□□□ -1.38
VMP1-204ENST00000587259 RHBDL1O75783 438 aa6.46□□□□□ -1.38
VMP1-204ENST00000587259 SFT2D2O95562 160 aa6.46□□□□□ -1.38
VMP1-204ENST00000587259 OR2H2O95918 312 aa6.46□□□□□ -1.38
VMP1-204ENST00000587259 CD55P08174 381 aa6.46□□□□□ -1.38
VMP1-204ENST00000587259 ZNF728P0DKX0 622 aa6.46□□□□□ -1.38
VMP1-204ENST00000587259 AKR1C4P17516 323 aa6.46□□□□□ -1.38
VMP1-204ENST00000587259 CXCL3P19876 107 aa6.46□□□□□ -1.38
VMP1-204ENST00000587259 NPY4RP50391 375 aa6.46□□□□□ -1.38
VMP1-204ENST00000587259 PRKDCP78527 4128 aaKnown RBP6.46□□□□□ -1.38
VMP1-204ENST00000587259 PPP1R1AQ13522 171 aa6.46□□□□□ -1.38
VMP1-204ENST00000587259 ZNF660Q6AZW8 331 aaPredicted RBP6.46□□□□□ -1.38
VMP1-204ENST00000587259 Q6P435 159 aa6.46□□□□□ -1.38
VMP1-204ENST00000587259 ZNF880Q6PDB4 577 aa6.46□□□□□ -1.38
VMP1-204ENST00000587259 RBMS3Q6XE24 437 aaKnown RBP6.46□□□□□ -1.38
VMP1-204ENST00000587259 ACP7Q6ZNF0 438 aa6.46□□□□□ -1.38
VMP1-204ENST00000587259 ZNF497Q6ZNH5 498 aa6.46□□□□□ -1.38
VMP1-204ENST00000587259 Q6ZR03 302 aa6.46□□□□□ -1.38
VMP1-204ENST00000587259 C1orf87Q8N0U7 546 aa6.46□□□□□ -1.38
VMP1-204ENST00000587259 ZNF565Q8N9K5 539 aa6.46□□□□□ -1.38
VMP1-204ENST00000587259 OR10J5Q8NHC4 309 aa6.46□□□□□ -1.38
VMP1-204ENST00000587259 GRPEL2Q8TAA5 225 aa6.46□□□□□ -1.38
VMP1-204ENST00000587259 LRRC29Q8WV35 223 aa6.46□□□□□ -1.38
VMP1-204ENST00000587259 RAB1CQ92928 201 aa6.46□□□□□ -1.38
VMP1-204ENST00000587259 TIMD4Q96H15 378 aa6.46□□□□□ -1.38
VMP1-204ENST00000587259 KIRREL1Q96J84 757 aa6.46□□□□□ -1.38
VMP1-204ENST00000587259 DMRTB1Q96MA1 342 aa6.46□□□□□ -1.38
VMP1-204ENST00000587259 OR2V2Q96R30 315 aa6.46□□□□□ -1.38
VMP1-204ENST00000587259 HDHD3Q9BSH5 251 aaPredicted RBP6.46□□□□□ -1.38
VMP1-204ENST00000587259 CABLES2Q9BTV7 478 aa6.46□□□□□ -1.38
VMP1-204ENST00000587259 PDCD10Q9BUL8 212 aa6.46□□□□□ -1.38
VMP1-204ENST00000587259 C5orf66Q9H5L9 145 aa6.46□□□□□ -1.38
VMP1-204ENST00000587259 SLA2Q9H6Q3 261 aa6.46□□□□□ -1.38
VMP1-204ENST00000587259 TMEM165Q9HC07 324 aa6.46□□□□□ -1.38
VMP1-204ENST00000587259 ZFP57Q9NU63 452 aa6.46□□□□□ -1.38
VMP1-204ENST00000587259 C1orf123Q9NWV4 160 aa6.46□□□□□ -1.38
VMP1-204ENST00000587259 DNAJB11Q9UBS4 358 aa6.46□□□□□ -1.38
VMP1-204ENST00000587259 NUP50Q9UKX7 468 aa6.46□□□□□ -1.38
VMP1-204ENST00000587259 AUP1Q9Y679 476 aa6.46□□□□□ -1.38
VMP1-204ENST00000587259 WNK1Q9H4A3 2382 aa6.45□□□□□ -1.38
VMP1-204ENST00000587259 DOCK11Q5JSL3 2073 aa6.45□□□□□ -1.38
VMP1-204ENST00000587259 TEX13DA0A0J9YY54 714 aaPredicted RBP6.45□□□□□ -1.38
VMP1-204ENST00000587259 OOEPA6NGQ2 149 aa6.45□□□□□ -1.38
VMP1-204ENST00000587259 OR5H14A6NHG9 310 aa6.45□□□□□ -1.38
VMP1-204ENST00000587259 CRYM-AS1A6NIL9 109 aa6.45□□□□□ -1.38
VMP1-204ENST00000587259 HMSDA8MTL9 139 aa6.45□□□□□ -1.38
VMP1-204ENST00000587259 F8VVB4 439 aa6.45□□□□□ -1.38
VMP1-204ENST00000587259 F8VWA3 439 aa6.45□□□□□ -1.38
VMP1-204ENST00000587259 SDCBPO00560 298 aaPredicted RBP6.45□□□□□ -1.38
VMP1-204ENST00000587259 PPYP01298 95 aa6.45□□□□□ -1.38
VMP1-204ENST00000587259 IGHV2-70P01814 119 aa6.45□□□□□ -1.38
VMP1-204ENST00000587259 FCGR2CP31995 323 aa6.45□□□□□ -1.38
VMP1-204ENST00000587259 KRTAP10-3P60369 221 aa6.45□□□□□ -1.38
VMP1-204ENST00000587259 RND3P61587 244 aa6.45□□□□□ -1.38
VMP1-204ENST00000587259 TNFAIP6P98066 277 aaPredicted RBP6.45□□□□□ -1.38
VMP1-204ENST00000587259 HOXA4Q00056 320 aaPredicted RBP6.45□□□□□ -1.38
VMP1-204ENST00000587259 NDUFA5Q16718 116 aa6.45□□□□□ -1.38
VMP1-204ENST00000587259 TMEM30BQ3MIR4 351 aa6.45□□□□□ -1.38
VMP1-204ENST00000587259 HIST2H2BDQ6DRA6 164 aa6.45□□□□□ -1.38
VMP1-204ENST00000587259 SLC35E4Q6ICL7 350 aa6.45□□□□□ -1.38
VMP1-204ENST00000587259 GSG1LQ6UXU4 331 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms