RNA–Protein interactions for RNA: ENST00000586548.5

CIRBP-208, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-208ENST00000586548 FAM234AQ9H0X4 552 aa18.55■□□□□ 0.56
CIRBP-208ENST00000586548 OR6C3Q9NZP0 311 aa18.55■□□□□ 0.56
CIRBP-208ENST00000586548 RNF115Q9Y4L5 304 aa18.55■□□□□ 0.56
CIRBP-208ENST00000586548 RAI1Q7Z5J4 1906 aaPredicted RBP18.55■□□□□ 0.56
CIRBP-208ENST00000586548 PPP1CCP36873 323 aaKnown RBP18.54■□□□□ 0.56
CIRBP-208ENST00000586548 ZNF788Q6ZQV5 615 aa18.54■□□□□ 0.56
CIRBP-208ENST00000586548 MS4A5Q9H3V2 200 aa18.54■□□□□ 0.56
CIRBP-208ENST00000586548 DYNLRB1Q9NP97 96 aa18.54■□□□□ 0.56
CIRBP-208ENST00000586548 ZZEF1O43149 2961 aa18.54■□□□□ 0.56
CIRBP-208ENST00000586548 TPRP12270 2363 aaKnown RBP18.54■□□□□ 0.56
CIRBP-208ENST00000586548 ATRXP46100 2492 aa18.54■□□□□ 0.56
CIRBP-208ENST00000586548 B9A039 149 aa18.54■□□□□ 0.56
CIRBP-208ENST00000586548 E5RGE8 158 aa18.54■□□□□ 0.56
CIRBP-208ENST00000586548 ST8SIA3O43173 380 aa18.54■□□□□ 0.56
CIRBP-208ENST00000586548 EDDM3BP56851 147 aa18.54■□□□□ 0.56
CIRBP-208ENST00000586548 CDSNQ15517 529 aa18.54■□□□□ 0.56
CIRBP-208ENST00000586548 TGIF2LYQ8IUE0 185 aa18.54■□□□□ 0.56
CIRBP-208ENST00000586548 C1orf87Q8N0U7 546 aa18.54■□□□□ 0.56
CIRBP-208ENST00000586548 ZCCHC24Q8N2G6 241 aaKnown RBP18.54■□□□□ 0.56
CIRBP-208ENST00000586548 RFESDQ8TAC1 157 aa18.54■□□□□ 0.56
CIRBP-208ENST00000586548 FAM216AQ8WUB2 273 aa18.54■□□□□ 0.56
CIRBP-208ENST00000586548 OR2D2Q9H210 308 aa18.54■□□□□ 0.56
CIRBP-208ENST00000586548 PLEKHF2Q9H8W4 249 aa18.54■□□□□ 0.56
CIRBP-208ENST00000586548 PLEKHA2Q9HB19 425 aa18.54■□□□□ 0.56
CIRBP-208ENST00000586548 NSG2Q9Y328 171 aa18.54■□□□□ 0.56
CIRBP-208ENST00000586548 ADAM20O43506 726 aa18.53■□□□□ 0.56
CIRBP-208ENST00000586548 HKR1P10072 659 aa18.53■□□□□ 0.56
CIRBP-208ENST00000586548 THOC7Q6I9Y2 204 aaKnown RBP18.53■□□□□ 0.56
CIRBP-208ENST00000586548 DEFB108BQ8NET1 73 aa18.53■□□□□ 0.56
CIRBP-208ENST00000586548 STOML3Q8TAV4 291 aa18.53■□□□□ 0.56
CIRBP-208ENST00000586548 PHYHIPLQ96FC7 376 aa18.53■□□□□ 0.56
CIRBP-208ENST00000586548 ABHD14BQ96IU4 210 aa18.53■□□□□ 0.56
CIRBP-208ENST00000586548 RAB9BQ9NP90 201 aa18.53■□□□□ 0.56
CIRBP-208ENST00000586548 DCAF16Q9NXF7 216 aa18.53■□□□□ 0.56
CIRBP-208ENST00000586548 JPT1Q9UK76 154 aa18.53■□□□□ 0.56
CIRBP-208ENST00000586548 POMT1Q9Y6A1 747 aa18.53■□□□□ 0.56
CIRBP-208ENST00000586548 LGALS8O00214 317 aa18.52■□□□□ 0.56
CIRBP-208ENST00000586548 F2RL2O00254 374 aa18.52■□□□□ 0.56
CIRBP-208ENST00000586548 SIGLEC5O15389 551 aa18.52■□□□□ 0.56
CIRBP-208ENST00000586548 GYPAP02724 150 aa18.52■□□□□ 0.56
CIRBP-208ENST00000586548 SELLP14151 372 aa18.52■□□□□ 0.56
CIRBP-208ENST00000586548 AUP1Q9Y679 476 aa18.52■□□□□ 0.56
CIRBP-208ENST00000586548 ACACBO00763 2458 aa18.52■□□□□ 0.56
CIRBP-208ENST00000586548 IGHV3-43A0A0B4J1X8 118 aa18.52■□□□□ 0.55
CIRBP-208ENST00000586548 TRAV38-1A0A0B4J264 116 aa18.52■□□□□ 0.55
CIRBP-208ENST00000586548 NKX6-3A6NJ46 265 aa18.52■□□□□ 0.55
CIRBP-208ENST00000586548 IGHV3-43DP0DP04 118 aa18.52■□□□□ 0.55
CIRBP-208ENST00000586548 RPL12P30050 165 aaKnown RBP18.52■□□□□ 0.55
CIRBP-208ENST00000586548 MST1LQ2TV78 715 aa18.52■□□□□ 0.55
CIRBP-208ENST00000586548 FAM53AQ6NSI3 398 aaPredicted RBP18.52■□□□□ 0.55
CIRBP-208ENST00000586548 EDARADDQ8WWZ3 215 aa18.52■□□□□ 0.55
CIRBP-208ENST00000586548 CCL13Q99616 98 aa18.52■□□□□ 0.55
CIRBP-208ENST00000586548 RNF150Q9ULK6 438 aa18.52■□□□□ 0.55
CIRBP-208ENST00000586548 TMEM178BH3BS89 294 aa18.51■□□□□ 0.55
CIRBP-208ENST00000586548 SIAH2O43255 324 aa18.51■□□□□ 0.55
CIRBP-208ENST00000586548 PLAUP00749 431 aa18.51■□□□□ 0.55
CIRBP-208ENST00000586548 CGB3P0DN86 165 aa18.51■□□□□ 0.55
CIRBP-208ENST00000586548 CGB7P0DN87 165 aa18.51■□□□□ 0.55
CIRBP-208ENST00000586548 SLC25A6P12236 298 aa18.51■□□□□ 0.55
CIRBP-208ENST00000586548 EIF4EBP1Q13541 118 aaPredicted RBP18.51■□□□□ 0.55
CIRBP-208ENST00000586548 GALNT11Q8NCW6 608 aa18.51■□□□□ 0.55
CIRBP-208ENST00000586548 PCNPQ8WW12 178 aaKnown RBP18.51■□□□□ 0.55
CIRBP-208ENST00000586548 CYTL1Q9NRR1 136 aa18.51■□□□□ 0.55
CIRBP-208ENST00000586548 CISD1Q9NZ45 108 aaKnown RBP18.51■□□□□ 0.55
CIRBP-208ENST00000586548 TANC2Q9HCD6 1990 aa18.5■□□□□ 0.55
CIRBP-208ENST00000586548 A0A1B0GW55 424 aa18.5■□□□□ 0.55
CIRBP-208ENST00000586548 MEX3AA1L020 520 aaKnown RBP18.5■□□□□ 0.55
CIRBP-208ENST00000586548 TAAR5O14804 337 aa18.5■□□□□ 0.55
CIRBP-208ENST00000586548 DUX4L2P0CJ85 424 aa18.5■□□□□ 0.55
CIRBP-208ENST00000586548 DUX4L3P0CJ86 424 aa18.5■□□□□ 0.55
CIRBP-208ENST00000586548 DUX4L4P0CJ87 422 aa18.5■□□□□ 0.55
CIRBP-208ENST00000586548 DUX4L5P0CJ88 424 aa18.5■□□□□ 0.55
CIRBP-208ENST00000586548 DUX4L6P0CJ89 424 aa18.5■□□□□ 0.55
CIRBP-208ENST00000586548 DUX4L7P0CJ90 424 aa18.5■□□□□ 0.55
CIRBP-208ENST00000586548 NKX2-1P43699 371 aaPredicted RBP18.5■□□□□ 0.55
CIRBP-208ENST00000586548 DUX4L9Q6RFH8 374 aaPredicted RBP18.5■□□□□ 0.55
CIRBP-208ENST00000586548 LSM10Q969L4 123 aaKnown RBP18.5■□□□□ 0.55
CIRBP-208ENST00000586548 C5orf30Q96GV9 206 aa18.5■□□□□ 0.55
CIRBP-208ENST00000586548 ZC4H2Q9NQZ6 224 aa18.5■□□□□ 0.55
CIRBP-208ENST00000586548 CALYQ9NYX4 217 aa18.5■□□□□ 0.55
CIRBP-208ENST00000586548 DUX4Q9UBX2 424 aa18.5■□□□□ 0.55
CIRBP-208ENST00000586548 DSCAML1Q8TD84 2053 aa18.49■□□□□ 0.55
CIRBP-208ENST00000586548 YPEL1O60688 119 aa18.49■□□□□ 0.55
CIRBP-208ENST00000586548 NMBP08949 121 aa18.49■□□□□ 0.55
CIRBP-208ENST00000586548 TPT1P13693 172 aaKnown RBP18.49■□□□□ 0.55
CIRBP-208ENST00000586548 ZNF16P17020 682 aaPredicted RBP18.49■□□□□ 0.55
CIRBP-208ENST00000586548 TFF3Q07654 80 aa18.49■□□□□ 0.55
CIRBP-208ENST00000586548 FAM216BQ8N7L0 139 aa18.49■□□□□ 0.55
CIRBP-208ENST00000586548 YPEL2Q96QA6 119 aa18.49■□□□□ 0.55
CIRBP-208ENST00000586548 TMEM106BQ9NUM4 274 aa18.49■□□□□ 0.55
CIRBP-208ENST00000586548 GNG12Q9UBI6 72 aa18.49■□□□□ 0.55
CIRBP-208ENST00000586548 RCL1Q9Y2P8 373 aaKnown RBP18.49■□□□□ 0.55
CIRBP-208ENST00000586548 PPIAL4EA0A075B759 164 aa18.49■□□□□ 0.55
CIRBP-208ENST00000586548 TRGV10A0A0A0MS01 117 aa18.49■□□□□ 0.55
CIRBP-208ENST00000586548 PPIAL4DF5H284 164 aa18.49■□□□□ 0.55
CIRBP-208ENST00000586548 IGKV1-39P01597 117 aa18.49■□□□□ 0.55
CIRBP-208ENST00000586548 IGKV1D-39P04432 117 aa18.49■□□□□ 0.55
CIRBP-208ENST00000586548 PPIAL4FP0DN26 164 aa18.49■□□□□ 0.55
CIRBP-208ENST00000586548 P2RY1P47900 373 aa18.49■□□□□ 0.55
CIRBP-208ENST00000586548 CATR1Q13166 79 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms