RNA–Protein interactions for RNA: ENST00000585726.5

RETREG3-202, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 522 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-202ENST00000585726 LYG1Q8N1E2 194 aa17.28■□□□□ 0.36
RETREG3-202ENST00000585726 C8orf31Q8N9H6 132 aa17.28■□□□□ 0.36
RETREG3-202ENST00000585726 YPEL2Q96QA6 119 aa17.28■□□□□ 0.36
RETREG3-202ENST00000585726 BCL7BQ9BQE9 202 aa17.28■□□□□ 0.36
RETREG3-202ENST00000585726 ABHD14AQ9BUJ0 271 aa17.28■□□□□ 0.36
RETREG3-202ENST00000585726 IGKV1-6A0A0C4DH72 117 aa17.27■□□□□ 0.36
RETREG3-202ENST00000585726 H3BMQ9 156 aa17.27■□□□□ 0.36
RETREG3-202ENST00000585726 BET1O15155 118 aa17.27■□□□□ 0.36
RETREG3-202ENST00000585726 XRCC3O43542 346 aa17.27■□□□□ 0.36
RETREG3-202ENST00000585726 SSX5O60225 188 aa17.27■□□□□ 0.36
RETREG3-202ENST00000585726 ZBTB25P24278 435 aa17.27■□□□□ 0.36
RETREG3-202ENST00000585726 BRS3P32247 399 aa17.27■□□□□ 0.36
RETREG3-202ENST00000585726 KIR2DS4P43632 304 aa17.27■□□□□ 0.36
RETREG3-202ENST00000585726 PITPNAQ00169 270 aa17.27■□□□□ 0.36
RETREG3-202ENST00000585726 KIR2DS1Q14954 304 aa17.27■□□□□ 0.36
RETREG3-202ENST00000585726 TMEM69Q5SWH9 247 aa17.27■□□□□ 0.36
RETREG3-202ENST00000585726 CCDC144NLQ6NUI1 221 aa17.27■□□□□ 0.36
RETREG3-202ENST00000585726 TMEM219Q86XT9 240 aa17.27■□□□□ 0.36
RETREG3-202ENST00000585726 OR2AK2Q8NG84 335 aa17.27■□□□□ 0.36
RETREG3-202ENST00000585726 AUNIPQ9H7T9 357 aa17.27■□□□□ 0.36
RETREG3-202ENST00000585726 IGKV1D-8A0A087WSZ0 117 aa17.26■□□□□ 0.35
RETREG3-202ENST00000585726 OOSP1A8MZH6 123 aa17.26■□□□□ 0.35
RETREG3-202ENST00000585726 FAM25AB3EWG3 89 aa17.26■□□□□ 0.35
RETREG3-202ENST00000585726 FAM25CB3EWG5 89 aa17.26■□□□□ 0.35
RETREG3-202ENST00000585726 FAM25GB3EWG6 89 aa17.26■□□□□ 0.35
RETREG3-202ENST00000585726 HSD17B6O14756 317 aa17.26■□□□□ 0.35
RETREG3-202ENST00000585726 DTYMKP23919 212 aa17.26■□□□□ 0.35
RETREG3-202ENST00000585726 HERPUD1Q15011 391 aa17.26■□□□□ 0.35
RETREG3-202ENST00000585726 IGSF11Q5DX21 431 aa17.26■□□□□ 0.35
RETREG3-202ENST00000585726 DHRS7BQ6IAN0 325 aaPredicted RBP17.26■□□□□ 0.35
RETREG3-202ENST00000585726 MOB3BQ86TA1 216 aa17.26■□□□□ 0.35
RETREG3-202ENST00000585726 OR4A4PQ8NGN8 299 aa17.26■□□□□ 0.35
RETREG3-202ENST00000585726 CAPSLQ8WWF8 208 aa17.26■□□□□ 0.35
RETREG3-202ENST00000585726 PARP12Q9H0J9 701 aaKnown RBP17.26■□□□□ 0.35
RETREG3-202ENST00000585726 TCF19Q9Y242 345 aa17.26■□□□□ 0.35
RETREG3-202ENST00000585726 SMIM31A0A1B0GVY4 71 aa17.25■□□□□ 0.35
RETREG3-202ENST00000585726 TIMM23O14925 209 aa17.25■□□□□ 0.35
RETREG3-202ENST00000585726 ST8SIA5O15466 376 aa17.25■□□□□ 0.35
RETREG3-202ENST00000585726 APOA1P02647 267 aa17.25■□□□□ 0.35
RETREG3-202ENST00000585726 GAPDHP04406 335 aaKnown RBP17.25■□□□□ 0.35
RETREG3-202ENST00000585726 FCER2P06734 321 aa17.25■□□□□ 0.35
RETREG3-202ENST00000585726 ELK1P19419 428 aa17.25■□□□□ 0.35
RETREG3-202ENST00000585726 RAB7AP51149 207 aa17.25■□□□□ 0.35
RETREG3-202ENST00000585726 DYNLT3P51808 116 aa17.25■□□□□ 0.35
RETREG3-202ENST00000585726 TAS2R20P59543 309 aa17.25■□□□□ 0.35
RETREG3-202ENST00000585726 CCBE1Q6UXH8 406 aaPredicted RBP17.25■□□□□ 0.35
RETREG3-202ENST00000585726 DRAM1Q8N682 238 aa17.25■□□□□ 0.35
RETREG3-202ENST00000585726 C1RLQ9NZP8 487 aa17.25■□□□□ 0.35
RETREG3-202ENST00000585726 MRPS7Q9Y2R9 242 aaKnown RBP17.25■□□□□ 0.35
RETREG3-202ENST00000585726 MEIS3P1A6NDR6 274 aa17.24■□□□□ 0.35
RETREG3-202ENST00000585726 A6NDX4 124 aa17.24■□□□□ 0.35
RETREG3-202ENST00000585726 HKR1P10072 659 aa17.24■□□□□ 0.35
RETREG3-202ENST00000585726 SRSF7Q16629 238 aaKnown RBP eCLIP17.24■□□□□ 0.35
RETREG3-202ENST00000585726 OR56B4Q8NH76 319 aa17.24■□□□□ 0.35
RETREG3-202ENST00000585726 DYNC2LI1Q8TCX1 351 aa17.24■□□□□ 0.35
RETREG3-202ENST00000585726 CMTM3Q96MX0 182 aa17.24■□□□□ 0.35
RETREG3-202ENST00000585726 IGHV3-72A0A0B4J1Y9 119 aa17.23■□□□□ 0.35
RETREG3-202ENST00000585726 A0A1W2PPI3 338 aa17.23■□□□□ 0.35
RETREG3-202ENST00000585726 TMEM89A2RUT3 159 aa17.23■□□□□ 0.35
RETREG3-202ENST00000585726 RGS5O15539 181 aa17.23■□□□□ 0.35
RETREG3-202ENST00000585726 CHST1O43916 411 aa17.23■□□□□ 0.35
RETREG3-202ENST00000585726 ZNF816Q0VGE8 651 aaPredicted RBP17.23■□□□□ 0.35
RETREG3-202ENST00000585726 LY6G6FQ5SQ64 297 aa17.23■□□□□ 0.35
RETREG3-202ENST00000585726 GVQW1Q8N7I0 195 aa17.23■□□□□ 0.35
RETREG3-202ENST00000585726 OR10J5Q8NHC4 309 aa17.23■□□□□ 0.35
RETREG3-202ENST00000585726 RTN4IP1Q8WWV3 396 aaPredicted RBP17.23■□□□□ 0.35
RETREG3-202ENST00000585726 ST6GALNAC6Q969X2 333 aa17.23■□□□□ 0.35
RETREG3-202ENST00000585726 GINS4Q9BRT9 223 aa17.23■□□□□ 0.35
RETREG3-202ENST00000585726 C11orf54Q9H0W9 315 aaPredicted RBP17.23■□□□□ 0.35
RETREG3-202ENST00000585726 RDH8Q9NYR8 311 aa17.23■□□□□ 0.35
RETREG3-202ENST00000585726 PITPNC1Q9UKF7 332 aa17.23■□□□□ 0.35
RETREG3-202ENST00000585726 RNF150Q9ULK6 438 aa17.23■□□□□ 0.35
RETREG3-202ENST00000585726 ATRQ13535 2644 aa17.22■□□□□ 0.35
RETREG3-202ENST00000585726 IGHV1-3A0A0C4DH29 117 aa17.22■□□□□ 0.35
RETREG3-202ENST00000585726 LPLP06858 475 aa17.22■□□□□ 0.35
RETREG3-202ENST00000585726 OR3A3P47888 321 aa17.22■□□□□ 0.35
RETREG3-202ENST00000585726 RELBQ01201 579 aa17.22■□□□□ 0.35
RETREG3-202ENST00000585726 HES1Q14469 280 aa17.22■□□□□ 0.35
RETREG3-202ENST00000585726 FBLN7Q53RD9 439 aa17.22■□□□□ 0.35
RETREG3-202ENST00000585726 TGIF2LXQ8IUE1 241 aa17.22■□□□□ 0.35
RETREG3-202ENST00000585726 OR8H3Q8N146 312 aa17.22■□□□□ 0.35
RETREG3-202ENST00000585726 EDARADDQ8WWZ3 215 aa17.22■□□□□ 0.35
RETREG3-202ENST00000585726 ABHD14BQ96IU4 210 aa17.22■□□□□ 0.35
RETREG3-202ENST00000585726 CABLES2Q9BTV7 478 aa17.22■□□□□ 0.35
RETREG3-202ENST00000585726 IFI27L2Q9H2X8 130 aa17.22■□□□□ 0.35
RETREG3-202ENST00000585726 RAB18Q9NP72 206 aa17.22■□□□□ 0.35
RETREG3-202ENST00000585726 CCDC59Q9P031 241 aaKnown RBP17.22■□□□□ 0.35
RETREG3-202ENST00000585726 SNRNP70P08621 437 aaKnown RBP17.21■□□□□ 0.35
RETREG3-202ENST00000585726 FAM106CPP0CH98 169 aa17.21■□□□□ 0.35
RETREG3-202ENST00000585726 RAG2P55895 527 aa17.21■□□□□ 0.35
RETREG3-202ENST00000585726 RPL15P61313 204 aaKnown RBP17.21■□□□□ 0.35
RETREG3-202ENST00000585726 Q6ZS49 121 aa17.21■□□□□ 0.35
RETREG3-202ENST00000585726 SNX29P2Q8IUI4 249 aa17.21■□□□□ 0.35
RETREG3-202ENST00000585726 ODF3L1Q8IXM7 274 aa17.21■□□□□ 0.35
RETREG3-202ENST00000585726 RSL24D1Q9UHA3 163 aaKnown RBP17.21■□□□□ 0.35
RETREG3-202ENST00000585726 SAA2-SAA4A0A096LPE2 208 aa17.2■□□□□ 0.34
RETREG3-202ENST00000585726 TRBV6-7A0A0A0MS04 114 aa17.2■□□□□ 0.34
RETREG3-202ENST00000585726 CTDSP2O14595 271 aa17.2■□□□□ 0.34
RETREG3-202ENST00000585726 SAA2P0DJI9 122 aaPredicted RBP17.2■□□□□ 0.34
RETREG3-202ENST00000585726 ZNF137PP52743 207 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms