RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 TINAGL1Q9GZM7 467 aaPredicted RBP14.95□□□□□ -0.02
RFFL-211ENST00000584541 TOLLIPQ9H0E2 274 aa14.95□□□□□ -0.02
RFFL-211ENST00000584541 PSG11Q9UQ72 335 aa14.95□□□□□ -0.02
RFFL-211ENST00000584541 RBM7Q9Y580 266 aaKnown RBP14.95□□□□□ -0.02
RFFL-211ENST00000584541 TRAV40A0A0B4J280 105 aa14.94□□□□□ -0.02
RFFL-211ENST00000584541 J3QR06 171 aa14.94□□□□□ -0.02
RFFL-211ENST00000584541 ITGB1BP1O14713 200 aa14.94□□□□□ -0.02
RFFL-211ENST00000584541 LY6G6DO95868 133 aa14.94□□□□□ -0.02
RFFL-211ENST00000584541 AMY2AP04746 511 aa14.94□□□□□ -0.02
RFFL-211ENST00000584541 ARG1P05089 322 aa14.94□□□□□ -0.02
RFFL-211ENST00000584541 NFYAP23511 347 aaPredicted RBP14.94□□□□□ -0.02
RFFL-211ENST00000584541 RAB7AP51149 207 aa14.94□□□□□ -0.02
RFFL-211ENST00000584541 HERV-K104P61576 105 aa14.94□□□□□ -0.02
RFFL-211ENST00000584541 PRB3Q04118 309 aaPredicted RBP14.94□□□□□ -0.02
RFFL-211ENST00000584541 CLEC9AQ6UXN8 241 aa14.94□□□□□ -0.02
RFFL-211ENST00000584541 PDZD9Q8IXQ8 264 aa14.94□□□□□ -0.02
RFFL-211ENST00000584541 OR11H6Q8NGC7 330 aa14.94□□□□□ -0.02
RFFL-211ENST00000584541 OR4C16Q8NGL9 310 aa14.94□□□□□ -0.02
RFFL-211ENST00000584541 NANPQ8TBE9 248 aa14.94□□□□□ -0.02
RFFL-211ENST00000584541 FAM216AQ8WUB2 273 aa14.94□□□□□ -0.02
RFFL-211ENST00000584541 GIMAP1Q8WWP7 306 aa14.94□□□□□ -0.02
RFFL-211ENST00000584541 ABHD14AQ9BUJ0 271 aa14.94□□□□□ -0.02
RFFL-211ENST00000584541 MCUBQ9NWR8 336 aa14.94□□□□□ -0.02
RFFL-211ENST00000584541 OR2W1Q9Y3N9 320 aa14.94□□□□□ -0.02
RFFL-211ENST00000584541 CENPVL3A0A0U1RRI6 287 aa14.93□□□□□ -0.02
RFFL-211ENST00000584541 LINC00854A0A1B0GVQ3 168 aa14.93□□□□□ -0.02
RFFL-211ENST00000584541 AVPP01185 164 aa14.93□□□□□ -0.02
RFFL-211ENST00000584541 HNF1AP20823 631 aa14.93□□□□□ -0.02
RFFL-211ENST00000584541 LGALS4P56470 323 aa14.93□□□□□ -0.02
RFFL-211ENST00000584541 ZNF626Q68DY1 528 aa14.93□□□□□ -0.02
RFFL-211ENST00000584541 HCP5Q6MZN7 132 aa14.93□□□□□ -0.02
RFFL-211ENST00000584541 FAM53AQ6NSI3 398 aaPredicted RBP14.93□□□□□ -0.02
RFFL-211ENST00000584541 C16orf87Q6PH81 154 aa14.93□□□□□ -0.02
RFFL-211ENST00000584541 DHRS11Q6UWP2 260 aa14.93□□□□□ -0.02
RFFL-211ENST00000584541 LINC00311Q8N616 119 aa14.93□□□□□ -0.02
RFFL-211ENST00000584541 BEND2Q8NDZ0 799 aa14.93□□□□□ -0.02
RFFL-211ENST00000584541 OR10X1Q8NGY0 326 aa14.93□□□□□ -0.02
RFFL-211ENST00000584541 SMR3AQ99954 134 aa14.93□□□□□ -0.02
RFFL-211ENST00000584541 C7orf50Q9BRJ6 194 aaKnown RBP14.93□□□□□ -0.02
RFFL-211ENST00000584541 ZNF2Q9BSG1 426 aaPredicted RBP14.93□□□□□ -0.02
RFFL-211ENST00000584541 C11orf54Q9H0W9 315 aaPredicted RBP14.93□□□□□ -0.02
RFFL-211ENST00000584541 HRASLSQ9HDD0 168 aa14.93□□□□□ -0.02
RFFL-211ENST00000584541 AMMECR1Q9Y4X0 333 aaPredicted RBP14.93□□□□□ -0.02
RFFL-211ENST00000584541 OTOGQ6ZRI0 2925 aa14.93□□□□□ -0.02
RFFL-211ENST00000584541 IGHV1-69DA0A0B4J2H0 117 aa14.92□□□□□ -0.02
RFFL-211ENST00000584541 A0A1W2PPE3 182 aa14.92□□□□□ -0.02
RFFL-211ENST00000584541 NAP1L6A6NFF2 107 aa14.92□□□□□ -0.02
RFFL-211ENST00000584541 PPYP01298 95 aa14.92□□□□□ -0.02
RFFL-211ENST00000584541 IGHV1-69P01742 117 aa14.92□□□□□ -0.02
RFFL-211ENST00000584541 AADACP22760 399 aa14.92□□□□□ -0.02
RFFL-211ENST00000584541 IL3RAP26951 378 aa14.92□□□□□ -0.02
RFFL-211ENST00000584541 LUMP51884 338 aaPredicted RBP14.92□□□□□ -0.02
RFFL-211ENST00000584541 SCGB2B2Q4G0G5 96 aa14.92□□□□□ -0.02
RFFL-211ENST00000584541 UTF1Q5T230 341 aa14.92□□□□□ -0.02
RFFL-211ENST00000584541 FAAP20Q6NZ36 180 aa14.92□□□□□ -0.02
RFFL-211ENST00000584541 SLC25A48Q6ZT89 311 aaKnown RBP14.92□□□□□ -0.02
RFFL-211ENST00000584541 ZNF439Q8NDP4 499 aa14.92□□□□□ -0.02
RFFL-211ENST00000584541 OR4D10Q8NGI6 311 aa14.92□□□□□ -0.02
RFFL-211ENST00000584541 OR56B4Q8NH76 319 aa14.92□□□□□ -0.02
RFFL-211ENST00000584541 CREB3L1Q96BA8 519 aa14.92□□□□□ -0.02
RFFL-211ENST00000584541 SLC6A7Q99884 636 aa14.92□□□□□ -0.02
RFFL-211ENST00000584541 PRRT1Q99946 306 aa14.92□□□□□ -0.02
RFFL-211ENST00000584541 MMP28Q9H239 520 aa14.92□□□□□ -0.02
RFFL-211ENST00000584541 GHITMQ9H3K2 345 aa14.92□□□□□ -0.02
RFFL-211ENST00000584541 TMEM160Q9NX00 188 aa14.92□□□□□ -0.02
RFFL-211ENST00000584541 SCP2D1Q9UJQ7 156 aa14.92□□□□□ -0.02
RFFL-211ENST00000584541 A0A1W2PRD5 423 aa14.91□□□□□ -0.02
RFFL-211ENST00000584541 A0A1W2PRF3 423 aa14.91□□□□□ -0.02
RFFL-211ENST00000584541 A0A1W2PRM7 423 aa14.91□□□□□ -0.02
RFFL-211ENST00000584541 NPFFO15130 113 aa14.91□□□□□ -0.02
RFFL-211ENST00000584541 TUSC2O75896 110 aa14.91□□□□□ -0.02
RFFL-211ENST00000584541 OR8U9P0C7N5 309 aa14.91□□□□□ -0.02
RFFL-211ENST00000584541 FXYD4P59646 89 aa14.91□□□□□ -0.02
RFFL-211ENST00000584541 BPIFB3P59826 476 aa14.91□□□□□ -0.02
RFFL-211ENST00000584541 HLA-DRB5Q30154 266 aa14.91□□□□□ -0.02
RFFL-211ENST00000584541 CT45A1Q5HYN5 189 aa14.91□□□□□ -0.02
RFFL-211ENST00000584541 FAM120AOSQ5T036 256 aa14.91□□□□□ -0.02
RFFL-211ENST00000584541 C1orf229Q6ZS94 237 aaPredicted RBP14.91□□□□□ -0.02
RFFL-211ENST00000584541 OR8U1Q8NH10 309 aa14.91□□□□□ -0.02
RFFL-211ENST00000584541 CT45A3Q8NHU0 189 aa14.91□□□□□ -0.02
RFFL-211ENST00000584541 PARP12Q9H0J9 701 aaKnown RBP14.91□□□□□ -0.02
RFFL-211ENST00000584541 ZNF221Q9UK13 617 aa14.91□□□□□ -0.02
RFFL-211ENST00000584541 IGHV3OR16-10A0A075B7F0 116 aa14.9□□□□□ -0.02
RFFL-211ENST00000584541 ODF3BA8MYP8 253 aa14.9□□□□□ -0.02
RFFL-211ENST00000584541 SLC31A2O15432 143 aa14.9□□□□□ -0.02
RFFL-211ENST00000584541 ST8SIA5O15466 376 aa14.9□□□□□ -0.02
RFFL-211ENST00000584541 IGLV1-47P01700 117 aa14.9□□□□□ -0.02
RFFL-211ENST00000584541 HTR1DP28221 377 aa14.9□□□□□ -0.02
RFFL-211ENST00000584541 CEACAM3P40198 252 aa14.9□□□□□ -0.02
RFFL-211ENST00000584541 ZNF134P52741 427 aa14.9□□□□□ -0.02
RFFL-211ENST00000584541 RIPPLY3P57055 190 aa14.9□□□□□ -0.02
RFFL-211ENST00000584541 DEFA1P59665 94 aa14.9□□□□□ -0.02
RFFL-211ENST00000584541 DEFA3P59666 94 aa14.9□□□□□ -0.02
RFFL-211ENST00000584541 MIDNQ504T8 468 aa14.9□□□□□ -0.02
RFFL-211ENST00000584541 ZNF660Q6AZW8 331 aaPredicted RBP14.9□□□□□ -0.02
RFFL-211ENST00000584541 LYG1Q8N1E2 194 aa14.9□□□□□ -0.02
RFFL-211ENST00000584541 OR51S1Q8NGJ8 323 aa14.9□□□□□ -0.02
RFFL-211ENST00000584541 MOB3AQ96BX8 217 aa14.9□□□□□ -0.02
RFFL-211ENST00000584541 PIPOXQ9P0Z9 390 aa14.9□□□□□ -0.02
RFFL-211ENST00000584541 NUP50Q9UKX7 468 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms