RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 C15orf65H3BRN8 121 aa12.49□□□□□ -0.41
SKA2-209ENST00000583976 ORC5O43913 435 aa12.49□□□□□ -0.41
SKA2-209ENST00000583976 TMEM127O75204 238 aa12.49□□□□□ -0.41
SKA2-209ENST00000583976 IGHV3-43DP0DP04 118 aa12.49□□□□□ -0.41
SKA2-209ENST00000583976 HIST1H1DP16402 221 aaKnown RBP12.49□□□□□ -0.41
SKA2-209ENST00000583976 CD33P20138 364 aa12.49□□□□□ -0.41
SKA2-209ENST00000583976 DYNLT3P51808 116 aa12.49□□□□□ -0.41
SKA2-209ENST00000583976 CDNFQ49AH0 187 aa12.49□□□□□ -0.41
SKA2-209ENST00000583976 C6orf183Q5T699 404 aa12.49□□□□□ -0.41
SKA2-209ENST00000583976 OR52W1Q6IF63 320 aa12.49□□□□□ -0.41
SKA2-209ENST00000583976 IZUMO1Q8IYV9 350 aa12.49□□□□□ -0.41
SKA2-209ENST00000583976 ABHD12Q8N2K0 398 aa12.49□□□□□ -0.41
SKA2-209ENST00000583976 SAMD12Q8N8I0 201 aa12.49□□□□□ -0.41
SKA2-209ENST00000583976 OR4P4Q8NGL7 312 aa12.49□□□□□ -0.41
SKA2-209ENST00000583976 OR1L1Q8NH94 360 aa12.49□□□□□ -0.41
SKA2-209ENST00000583976 TAF9BQ9HBM6 251 aa12.49□□□□□ -0.41
SKA2-209ENST00000583976 KCNIP1Q9NZI2 227 aa12.49□□□□□ -0.41
SKA2-209ENST00000583976 H3BMQ9 156 aa12.48□□□□□ -0.41
SKA2-209ENST00000583976 K7EIL1 84 aa12.48□□□□□ -0.41
SKA2-209ENST00000583976 SDCBPO00560 298 aaPredicted RBP12.48□□□□□ -0.41
SKA2-209ENST00000583976 MFNGO00587 321 aa12.48□□□□□ -0.41
SKA2-209ENST00000583976 NAPSAO96009 420 aa12.48□□□□□ -0.41
SKA2-209ENST00000583976 HBZP02008 142 aa12.48□□□□□ -0.41
SKA2-209ENST00000583976 CD3GP09693 182 aa12.48□□□□□ -0.41
SKA2-209ENST00000583976 PF4V1P10720 104 aa12.48□□□□□ -0.41
SKA2-209ENST00000583976 MRPS15P82914 257 aaKnown RBP12.48□□□□□ -0.41
SKA2-209ENST00000583976 CD83Q01151 205 aa12.48□□□□□ -0.41
SKA2-209ENST00000583976 FAM53AQ6NSI3 398 aaPredicted RBP12.48□□□□□ -0.41
SKA2-209ENST00000583976 OR5AU1Q8NGC0 362 aa12.48□□□□□ -0.41
SKA2-209ENST00000583976 KCTD12Q96CX2 325 aaKnown RBP12.48□□□□□ -0.41
SKA2-209ENST00000583976 CLEC7AQ9BXN2 247 aa12.48□□□□□ -0.41
SKA2-209ENST00000583976 ZNF286AQ9HBT8 521 aa12.48□□□□□ -0.41
SKA2-209ENST00000583976 C12orf4Q9NQ89 552 aa12.48□□□□□ -0.41
SKA2-209ENST00000583976 MBNL3Q9NUK0 354 aaKnown RBP12.48□□□□□ -0.41
SKA2-209ENST00000583976 TRAV18A0A075B6X5 111 aa12.47□□□□□ -0.41
SKA2-209ENST00000583976 TOR1AO14656 332 aa12.47□□□□□ -0.41
SKA2-209ENST00000583976 SPINT2O43291 252 aa12.47□□□□□ -0.41
SKA2-209ENST00000583976 SCGNO76038 276 aa12.47□□□□□ -0.41
SKA2-209ENST00000583976 ZNF182P17025 639 aaPredicted RBP12.47□□□□□ -0.41
SKA2-209ENST00000583976 GNG10P50151 68 aa12.47□□□□□ -0.41
SKA2-209ENST00000583976 ARFRP1Q13795 201 aa12.47□□□□□ -0.41
SKA2-209ENST00000583976 UBE2NLQ5JXB2 153 aa12.47□□□□□ -0.41
SKA2-209ENST00000583976 MINOS1Q5TGZ0 78 aa12.47□□□□□ -0.41
SKA2-209ENST00000583976 TRAT1Q6PIZ9 186 aa12.47□□□□□ -0.41
SKA2-209ENST00000583976 BCL7BQ9BQE9 202 aa12.47□□□□□ -0.41
SKA2-209ENST00000583976 RIMS4Q9H426 269 aaPredicted RBP12.47□□□□□ -0.41
SKA2-209ENST00000583976 LINC00574Q9H8X3 128 aa12.47□□□□□ -0.41
SKA2-209ENST00000583976 DIABLOQ9NR28 239 aa12.47□□□□□ -0.41
SKA2-209ENST00000583976 MINOS1-NBL1R4GNA1 71 aa12.47□□□□□ -0.41
SKA2-209ENST00000583976 A0A1W2PPE3 182 aa12.46□□□□□ -0.41
SKA2-209ENST00000583976 TMEM235A6NFC5 223 aa12.46□□□□□ -0.41
SKA2-209ENST00000583976 HPGDSO60760 199 aa12.46□□□□□ -0.41
SKA2-209ENST00000583976 EIF4EP06730 217 aaKnown RBP12.46□□□□□ -0.41
SKA2-209ENST00000583976 LPLP06858 475 aa12.46□□□□□ -0.41
SKA2-209ENST00000583976 SOX6P35712 828 aa12.46□□□□□ -0.41
SKA2-209ENST00000583976 TALDO1P37837 337 aa12.46□□□□□ -0.41
SKA2-209ENST00000583976 ZNF260Q3ZCT1 412 aa12.46□□□□□ -0.41
SKA2-209ENST00000583976 KHDC1LQ5JSQ8 128 aa12.46□□□□□ -0.41
SKA2-209ENST00000583976 MZT2AQ6P582 158 aa12.46□□□□□ -0.41
SKA2-209ENST00000583976 ZNF880Q6PDB4 577 aa12.46□□□□□ -0.41
SKA2-209ENST00000583976 OR10A7Q8NGE5 316 aa12.46□□□□□ -0.41
SKA2-209ENST00000583976 OR52L2PQ8NGH6 319 aa12.46□□□□□ -0.41
SKA2-209ENST00000583976 OR10V1Q8NGI7 309 aa12.46□□□□□ -0.41
SKA2-209ENST00000583976 IL1F10Q8WWZ1 152 aa12.46□□□□□ -0.41
SKA2-209ENST00000583976 ACOT12Q8WYK0 555 aa12.46□□□□□ -0.41
SKA2-209ENST00000583976 AP3S1Q92572 193 aa12.46□□□□□ -0.41
SKA2-209ENST00000583976 S100A16Q96FQ6 103 aaKnown RBP12.46□□□□□ -0.41
SKA2-209ENST00000583976 ABCG5Q9H222 651 aa12.46□□□□□ -0.41
SKA2-209ENST00000583976 Q9N2K0 584 aa12.46□□□□□ -0.41
SKA2-209ENST00000583976 ZNF230Q9UIE0 474 aaPredicted RBP12.46□□□□□ -0.41
SKA2-209ENST00000583976 PSG11Q9UQ72 335 aa12.46□□□□□ -0.41
SKA2-209ENST00000583976 WI2-2373I1.2A0A1W2PRP0 233 aa12.45□□□□□ -0.42
SKA2-209ENST00000583976 SERPINE3A8MV23 424 aa12.45□□□□□ -0.42
SKA2-209ENST00000583976 PF4P02776 101 aa12.45□□□□□ -0.42
SKA2-209ENST00000583976 HTR1DP28221 377 aa12.45□□□□□ -0.42
SKA2-209ENST00000583976 CD34P28906 385 aa12.45□□□□□ -0.42
SKA2-209ENST00000583976 KRTAP10-11P60412 298 aa12.45□□□□□ -0.42
SKA2-209ENST00000583976 ARL6IP1Q15041 203 aa12.45□□□□□ -0.42
SKA2-209ENST00000583976 HMGN3Q15651 99 aa12.45□□□□□ -0.42
SKA2-209ENST00000583976 ABCA11PQ4W5N1 156 aa12.45□□□□□ -0.42
SKA2-209ENST00000583976 HACD4Q5VWC8 232 aa12.45□□□□□ -0.42
SKA2-209ENST00000583976 DYNC2LI1Q8TCX1 351 aa12.45□□□□□ -0.42
SKA2-209ENST00000583976 NUDCD2Q8WVJ2 157 aa12.45□□□□□ -0.42
SKA2-209ENST00000583976 MAFIPQ8WZ33 124 aa12.45□□□□□ -0.42
SKA2-209ENST00000583976 SLC25A33Q9BSK2 321 aa12.45□□□□□ -0.42
SKA2-209ENST00000583976 RAB9BQ9NP90 201 aa12.45□□□□□ -0.42
SKA2-209ENST00000583976 GFOD1Q9NXC2 390 aa12.45□□□□□ -0.42
SKA2-209ENST00000583976 GNG12Q9UBI6 72 aa12.45□□□□□ -0.42
SKA2-209ENST00000583976 A0A087X0M5 115 aa12.44□□□□□ -0.42
SKA2-209ENST00000583976 TRBV6-6A0A0A6YYG2 114 aa12.44□□□□□ -0.42
SKA2-209ENST00000583976 A0A1B0GX30 115 aa12.44□□□□□ -0.42
SKA2-209ENST00000583976 FAM25AB3EWG3 89 aa12.44□□□□□ -0.42
SKA2-209ENST00000583976 FAM25CB3EWG5 89 aa12.44□□□□□ -0.42
SKA2-209ENST00000583976 FAM25GB3EWG6 89 aa12.44□□□□□ -0.42
SKA2-209ENST00000583976 J3QR06 171 aa12.44□□□□□ -0.42
SKA2-209ENST00000583976 AMY1AP04745 511 aa12.44□□□□□ -0.42
SKA2-209ENST00000583976 AMY2AP04746 511 aa12.44□□□□□ -0.42
SKA2-209ENST00000583976 FCGR3AP08637 254 aa12.44□□□□□ -0.42
SKA2-209ENST00000583976 GSTP1P09211 210 aaKnown RBP12.44□□□□□ -0.42
SKA2-209ENST00000583976 SCTP09683 121 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms