RNA–Protein interactions for RNA: ENST00000581979.5

SRSF1-204, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 1 (best)

Gene SRSF1, Length 1,720 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-204ENST00000581979 SLC5A7Q9GZV3 580 aa10.41□□□□□ -0.74
SRSF1-204ENST00000581979 OR2W1Q9Y3N9 320 aa10.41□□□□□ -0.74
SRSF1-204ENST00000581979 ADAM20O43506 726 aa10.41□□□□□ -0.74
SRSF1-204ENST00000581979 SLC22A5O76082 557 aa10.41□□□□□ -0.74
SRSF1-204ENST00000581979 NDUFB7P17568 137 aa10.41□□□□□ -0.74
SRSF1-204ENST00000581979 GZMHP20718 246 aa10.41□□□□□ -0.74
SRSF1-204ENST00000581979 SSTR5P35346 364 aa10.41□□□□□ -0.74
SRSF1-204ENST00000581979 TMEM249Q2WGJ8 235 aa10.41□□□□□ -0.74
SRSF1-204ENST00000581979 ZFP69Q49AA0 526 aa10.41□□□□□ -0.74
SRSF1-204ENST00000581979 PHLDA2Q53GA4 152 aa10.41□□□□□ -0.74
SRSF1-204ENST00000581979 LIN54Q6MZP7 749 aa10.41□□□□□ -0.74
SRSF1-204ENST00000581979 SGPP2Q8IWX5 399 aa10.41□□□□□ -0.74
SRSF1-204ENST00000581979 CCDC71LQ8N9Z2 235 aa10.41□□□□□ -0.74
SRSF1-204ENST00000581979 MITD1Q8WV92 249 aa10.41□□□□□ -0.74
SRSF1-204ENST00000581979 ZNF486Q96H40 463 aaPredicted RBP10.41□□□□□ -0.74
SRSF1-204ENST00000581979 ZNF436Q9C0F3 470 aaPredicted RBP10.41□□□□□ -0.74
SRSF1-204ENST00000581979 NCOR1P1Q9H4R4 102 aa10.41□□□□□ -0.74
SRSF1-204ENST00000581979 RDH8Q9NYR8 311 aa10.41□□□□□ -0.74
SRSF1-204ENST00000581979 OR6C3Q9NZP0 311 aa10.41□□□□□ -0.74
SRSF1-204ENST00000581979 SLC25A10Q9UBX3 287 aaPredicted RBP10.41□□□□□ -0.74
SRSF1-204ENST00000581979 RBM7Q9Y580 266 aaKnown RBP10.41□□□□□ -0.74
SRSF1-204ENST00000581979 ATRQ13535 2644 aa10.4□□□□□ -0.74
SRSF1-204ENST00000581979 IGKV1D-13A0A0B4J2D9 117 aa10.4□□□□□ -0.74
SRSF1-204ENST00000581979 CRYM-AS1A6NIL9 109 aa10.4□□□□□ -0.74
SRSF1-204ENST00000581979 NDUFS8O00217 210 aa10.4□□□□□ -0.74
SRSF1-204ENST00000581979 HSD17B6O14756 317 aa10.4□□□□□ -0.74
SRSF1-204ENST00000581979 NDUFB3O43676 98 aa10.4□□□□□ -0.74
SRSF1-204ENST00000581979 NDUFA2O43678 99 aa10.4□□□□□ -0.74
SRSF1-204ENST00000581979 LY6HO94772 140 aa10.4□□□□□ -0.74
SRSF1-204ENST00000581979 DUS4LO95620 317 aaKnown RBP10.4□□□□□ -0.74
SRSF1-204ENST00000581979 IGKV1-13P0DP09 117 aa10.4□□□□□ -0.74
SRSF1-204ENST00000581979 CEACAM6P40199 344 aa10.4□□□□□ -0.74
SRSF1-204ENST00000581979 LUMP51884 338 aaPredicted RBP10.4□□□□□ -0.74
SRSF1-204ENST00000581979 KCTD9Q7L273 389 aa10.4□□□□□ -0.74
SRSF1-204ENST00000581979 OR52L2PQ8NGH6 319 aa10.4□□□□□ -0.74
SRSF1-204ENST00000581979 OR10V1Q8NGI7 309 aa10.4□□□□□ -0.74
SRSF1-204ENST00000581979 COQ8AQ8NI60 647 aa10.4□□□□□ -0.74
SRSF1-204ENST00000581979 RTN4IP1Q8WWV3 396 aaPredicted RBP10.4□□□□□ -0.74
SRSF1-204ENST00000581979 TMEM246Q9BRR3 403 aa10.4□□□□□ -0.74
SRSF1-204ENST00000581979 CHIAQ9BZP6 476 aa10.4□□□□□ -0.74
SRSF1-204ENST00000581979 YAE1D1Q9NRH1 226 aa10.4□□□□□ -0.74
SRSF1-204ENST00000581979 SLC2A9Q9NRM0 540 aa10.4□□□□□ -0.74
SRSF1-204ENST00000581979 OPN4Q9UHM6 478 aa10.4□□□□□ -0.74
SRSF1-204ENST00000581979 TRGV10A0A0A0MS01 117 aa10.39□□□□□ -0.75
SRSF1-204ENST00000581979 VWC2LB2RUY7 222 aa10.39□□□□□ -0.75
SRSF1-204ENST00000581979 GPR31O00270 319 aa10.39□□□□□ -0.75
SRSF1-204ENST00000581979 IFNA2P01563 188 aa10.39□□□□□ -0.75
SRSF1-204ENST00000581979 DAOP14920 347 aa10.39□□□□□ -0.75
SRSF1-204ENST00000581979 GNRHRP30968 328 aa10.39□□□□□ -0.75
SRSF1-204ENST00000581979 SUPT4H1P63272 117 aaKnown RBP10.39□□□□□ -0.75
SRSF1-204ENST00000581979 LTC4SQ16873 150 aa10.39□□□□□ -0.75
SRSF1-204ENST00000581979 C2orf68Q2NKX9 166 aa10.39□□□□□ -0.75
SRSF1-204ENST00000581979 CR1LQ2VPA4 569 aa10.39□□□□□ -0.75
SRSF1-204ENST00000581979 LRRC10Q5BKY1 277 aa10.39□□□□□ -0.75
SRSF1-204ENST00000581979 LYPD2Q6UXB3 125 aa10.39□□□□□ -0.75
SRSF1-204ENST00000581979 RFESDQ8TAC1 157 aa10.39□□□□□ -0.75
SRSF1-204ENST00000581979 MDFIQ99750 246 aa10.39□□□□□ -0.75
SRSF1-204ENST00000581979 NAA60Q9H7X0 242 aa10.39□□□□□ -0.75
SRSF1-204ENST00000581979 RAB9BQ9NP90 201 aa10.39□□□□□ -0.75
SRSF1-204ENST00000581979 CCL28Q9NRJ3 127 aa10.39□□□□□ -0.75
SRSF1-204ENST00000581979 KCNIP3Q9Y2W7 256 aa10.39□□□□□ -0.75
SRSF1-204ENST00000581979 FBN1P35555 2871 aaKnown RBP10.39□□□□□ -0.75
SRSF1-204ENST00000581979 KIAA2026Q5HYC2 2103 aa10.39□□□□□ -0.75
SRSF1-204ENST00000581979 DNHD1Q96M86 4753 aa10.39□□□□□ -0.75
SRSF1-204ENST00000581979 C15orf65H3BRN8 121 aa10.38□□□□□ -0.75
SRSF1-204ENST00000581979 TNFRSF13BO14836 293 aaPredicted RBP10.38□□□□□ -0.75
SRSF1-204ENST00000581979 RP2O75695 350 aa10.38□□□□□ -0.75
SRSF1-204ENST00000581979 SIX6O95475 246 aa10.38□□□□□ -0.75
SRSF1-204ENST00000581979 RPS2P15880 293 aaKnown RBP10.38□□□□□ -0.75
SRSF1-204ENST00000581979 USF1P22415 310 aaPredicted RBP10.38□□□□□ -0.75
SRSF1-204ENST00000581979 PDLIM4P50479 330 aa10.38□□□□□ -0.75
SRSF1-204ENST00000581979 MRPS11P82912 194 aaKnown RBP10.38□□□□□ -0.75
SRSF1-204ENST00000581979 ZNF818PQ6ZRF7 136 aa10.38□□□□□ -0.75
SRSF1-204ENST00000581979 NLRC3Q7RTR2 1065 aa10.38□□□□□ -0.75
SRSF1-204ENST00000581979 FAM185AQ8N0U4 392 aa10.38□□□□□ -0.75
SRSF1-204ENST00000581979 FGFRL1Q8N441 504 aa10.38□□□□□ -0.75
SRSF1-204ENST00000581979 OR2S2Q9NQN1 319 aa10.38□□□□□ -0.75
SRSF1-204ENST00000581979 CALYQ9NYX4 217 aa10.38□□□□□ -0.75
SRSF1-204ENST00000581979 PRR13Q9NZ81 148 aa10.38□□□□□ -0.75
SRSF1-204ENST00000581979 KAAG1Q9UBP8 84 aa10.38□□□□□ -0.75
SRSF1-204ENST00000581979 COL6A5A8TX70 2615 aa10.38□□□□□ -0.75
SRSF1-204ENST00000581979 IGHV3-43A0A0B4J1X8 118 aa10.38□□□□□ -0.75
SRSF1-204ENST00000581979 A0A0B4J2A0 478 aa10.38□□□□□ -0.75
SRSF1-204ENST00000581979 SMLR1H3BR10 107 aa10.38□□□□□ -0.75
SRSF1-204ENST00000581979 IGHV2-70P01814 119 aa10.38□□□□□ -0.75
SRSF1-204ENST00000581979 IGHV3-43DP0DP04 118 aa10.38□□□□□ -0.75
SRSF1-204ENST00000581979 S100GP29377 79 aa10.38□□□□□ -0.75
SRSF1-204ENST00000581979 HTD2P86397 168 aa10.38□□□□□ -0.75
SRSF1-204ENST00000581979 GNMTQ14749 295 aa10.38□□□□□ -0.75
SRSF1-204ENST00000581979 C11orf91Q3C1V1 193 aa10.38□□□□□ -0.75
SRSF1-204ENST00000581979 ANKRD55Q3KP44 614 aa10.38□□□□□ -0.75
SRSF1-204ENST00000581979 AVPI1Q5T686 147 aa10.38□□□□□ -0.75
SRSF1-204ENST00000581979 CMTM1Q8IZ96 169 aa10.38□□□□□ -0.75
SRSF1-204ENST00000581979 H1FXQ92522 213 aaKnown RBP10.38□□□□□ -0.75
SRSF1-204ENST00000581979 TIMD4Q96H15 378 aa10.38□□□□□ -0.75
SRSF1-204ENST00000581979 TMEM160Q9NX00 188 aa10.38□□□□□ -0.75
SRSF1-204ENST00000581979 CTSZQ9UBR2 303 aa10.38□□□□□ -0.75
SRSF1-204ENST00000581979 SHPKQ9UHJ6 478 aa10.38□□□□□ -0.75
SRSF1-204ENST00000581979 KCNS2Q9ULS6 477 aa10.38□□□□□ -0.75
SRSF1-204ENST00000581979 hADV38S2A0JD32 116 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms