RNA–Protein interactions for RNA: ENST00000581761.5

MKS1-211, Transcript of Meckel syndrome, type 1, humanhuman

TSL 3

Gene MKS1, Length 812 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-211ENST00000581761 AP2S1P53680 142 aaPredicted RBP12.18□□□□□ -0.46
MKS1-211ENST00000581761 EDDM3BP56851 147 aa12.18□□□□□ -0.46
MKS1-211ENST00000581761 TFF3Q07654 80 aa12.18□□□□□ -0.46
MKS1-211ENST00000581761 IL15RAQ13261 267 aa12.18□□□□□ -0.46
MKS1-211ENST00000581761 RAB32Q13637 225 aa12.18□□□□□ -0.46
MKS1-211ENST00000581761 GNMTQ14749 295 aa12.18□□□□□ -0.46
MKS1-211ENST00000581761 NDUFA5Q16718 116 aa12.18□□□□□ -0.46
MKS1-211ENST00000581761 MST1LQ2TV78 715 aa12.18□□□□□ -0.46
MKS1-211ENST00000581761 ZNF672Q499Z4 452 aaPredicted RBP12.18□□□□□ -0.46
MKS1-211ENST00000581761 PRSS54Q6PEW0 395 aa12.18□□□□□ -0.46
MKS1-211ENST00000581761 ZNF695Q8IW36 515 aa12.18□□□□□ -0.46
MKS1-211ENST00000581761 SELENOHQ8IZQ5 122 aaKnown RBP12.18□□□□□ -0.46
MKS1-211ENST00000581761 RFESDQ8TAC1 157 aa12.18□□□□□ -0.46
MKS1-211ENST00000581761 C14orf79Q96F83 325 aa12.18□□□□□ -0.46
MKS1-211ENST00000581761 TMEM56Q96MV1 263 aa12.18□□□□□ -0.46
MKS1-211ENST00000581761 GPHA2Q96T91 129 aa12.18□□□□□ -0.46
MKS1-211ENST00000581761 TOLLIPQ9H0E2 274 aa12.18□□□□□ -0.46
MKS1-211ENST00000581761 TMEM56-RWDD3S4R434 201 aa12.18□□□□□ -0.46
MKS1-211ENST00000581761 ABCA12Q86UK0 2595 aa12.18□□□□□ -0.46
MKS1-211ENST00000581761 CSMD1Q96PZ7 3565 aa12.17□□□□□ -0.46
MKS1-211ENST00000581761 IGHV3-43A0A0B4J1X8 118 aa12.17□□□□□ -0.46
MKS1-211ENST00000581761 TRAV38-1A0A0B4J264 116 aa12.17□□□□□ -0.46
MKS1-211ENST00000581761 A0A1B0GW55 424 aa12.17□□□□□ -0.46
MKS1-211ENST00000581761 MEX3AA1L020 520 aaKnown RBP12.17□□□□□ -0.46
MKS1-211ENST00000581761 H0YIZ8 118 aa12.17□□□□□ -0.46
MKS1-211ENST00000581761 C15orf65H3BRN8 121 aa12.17□□□□□ -0.46
MKS1-211ENST00000581761 TMEM178BH3BS89 294 aa12.17□□□□□ -0.46
MKS1-211ENST00000581761 OR2F2O95006 317 aa12.17□□□□□ -0.46
MKS1-211ENST00000581761 DUX4L2P0CJ85 424 aa12.17□□□□□ -0.46
MKS1-211ENST00000581761 DUX4L3P0CJ86 424 aa12.17□□□□□ -0.46
MKS1-211ENST00000581761 DUX4L4P0CJ87 422 aa12.17□□□□□ -0.46
MKS1-211ENST00000581761 DUX4L5P0CJ88 424 aa12.17□□□□□ -0.46
MKS1-211ENST00000581761 DUX4L6P0CJ89 424 aa12.17□□□□□ -0.46
MKS1-211ENST00000581761 DUX4L7P0CJ90 424 aa12.17□□□□□ -0.46
MKS1-211ENST00000581761 PET100P0DJ07 73 aa12.17□□□□□ -0.46
MKS1-211ENST00000581761 IGHV3-43DP0DP04 118 aa12.17□□□□□ -0.46
MKS1-211ENST00000581761 UCP1P25874 307 aa12.17□□□□□ -0.46
MKS1-211ENST00000581761 PPP1CCP36873 323 aaKnown RBP12.17□□□□□ -0.46
MKS1-211ENST00000581761 OR2F1Q13607 317 aa12.17□□□□□ -0.46
MKS1-211ENST00000581761 DUX4L9Q6RFH8 374 aaPredicted RBP12.17□□□□□ -0.46
MKS1-211ENST00000581761 TEX261Q6UWH6 196 aa12.17□□□□□ -0.46
MKS1-211ENST00000581761 ZNF788Q6ZQV5 615 aa12.17□□□□□ -0.46
MKS1-211ENST00000581761 ACOT7LQ6ZUV0 252 aa12.17□□□□□ -0.46
MKS1-211ENST00000581761 KCNRGQ8N5I3 272 aa12.17□□□□□ -0.46
MKS1-211ENST00000581761 FAM216BQ8N7L0 139 aa12.17□□□□□ -0.46
MKS1-211ENST00000581761 SLC35G3Q8N808 338 aa12.17□□□□□ -0.46
MKS1-211ENST00000581761 INO80EQ8NBZ0 244 aaPredicted RBP12.17□□□□□ -0.46
MKS1-211ENST00000581761 FAM234AQ9H0X4 552 aa12.17□□□□□ -0.46
MKS1-211ENST00000581761 NCOR1P1Q9H4R4 102 aa12.17□□□□□ -0.46
MKS1-211ENST00000581761 OR2S2Q9NQN1 319 aa12.17□□□□□ -0.46
MKS1-211ENST00000581761 TMEM106BQ9NUM4 274 aa12.17□□□□□ -0.46
MKS1-211ENST00000581761 OR6C3Q9NZP0 311 aa12.17□□□□□ -0.46
MKS1-211ENST00000581761 DUX4Q9UBX2 424 aa12.17□□□□□ -0.46
MKS1-211ENST00000581761 TMED3Q9Y3Q3 217 aa12.17□□□□□ -0.46
MKS1-211ENST00000581761 KLF2Q9Y5W3 355 aaPredicted RBP12.17□□□□□ -0.46
MKS1-211ENST00000581761 U3KQ87 197 aa12.17□□□□□ -0.46
MKS1-211ENST00000581761 CACNA1DQ01668 2161 aa12.17□□□□□ -0.46
MKS1-211ENST00000581761 DYSFO75923 2080 aa12.17□□□□□ -0.46
MKS1-211ENST00000581761 PPIAL4EA0A075B759 164 aa12.16□□□□□ -0.46
MKS1-211ENST00000581761 RNF222A6NCQ9 220 aa12.16□□□□□ -0.46
MKS1-211ENST00000581761 PPIAL4DF5H284 164 aa12.16□□□□□ -0.46
MKS1-211ENST00000581761 SIGLEC5O15389 551 aa12.16□□□□□ -0.46
MKS1-211ENST00000581761 B3GALNT1O75752 331 aa12.16□□□□□ -0.46
MKS1-211ENST00000581761 SCGB1D2O95969 90 aa12.16□□□□□ -0.46
MKS1-211ENST00000581761 IFNA7P01567 189 aa12.16□□□□□ -0.46
MKS1-211ENST00000581761 WNT2P09544 360 aa12.16□□□□□ -0.46
MKS1-211ENST00000581761 PPIAL4FP0DN26 164 aa12.16□□□□□ -0.46
MKS1-211ENST00000581761 LYL1P12980 280 aa12.16□□□□□ -0.46
MKS1-211ENST00000581761 GZMHP20718 246 aa12.16□□□□□ -0.46
MKS1-211ENST00000581761 F2RP25116 425 aa12.16□□□□□ -0.46
MKS1-211ENST00000581761 NUP62P37198 522 aaPredicted RBP12.16□□□□□ -0.46
MKS1-211ENST00000581761 HTD2P86397 168 aa12.16□□□□□ -0.46
MKS1-211ENST00000581761 ZNF345Q14585 488 aa12.16□□□□□ -0.46
MKS1-211ENST00000581761 SMCO1Q147U7 214 aa12.16□□□□□ -0.46
MKS1-211ENST00000581761 LTC4SQ16873 150 aa12.16□□□□□ -0.46
MKS1-211ENST00000581761 SP5Q6BEB4 398 aaPredicted RBP12.16□□□□□ -0.46
MKS1-211ENST00000581761 FAM53AQ6NSI3 398 aaPredicted RBP12.16□□□□□ -0.46
MKS1-211ENST00000581761 MUC15Q8N387 334 aa12.16□□□□□ -0.46
MKS1-211ENST00000581761 ZNF680Q8NEM1 530 aa12.16□□□□□ -0.46
MKS1-211ENST00000581761 OR51H1Q8NH63 302 aa12.16□□□□□ -0.46
MKS1-211ENST00000581761 CCL17Q92583 94 aa12.16□□□□□ -0.46
MKS1-211ENST00000581761 TMEM204Q9BSN7 226 aa12.16□□□□□ -0.46
MKS1-211ENST00000581761 RNF126Q9BV68 326 aa12.16□□□□□ -0.46
MKS1-211ENST00000581761 OR5AC2Q9NZP5 309 aa12.16□□□□□ -0.46
MKS1-211ENST00000581761 RNF150Q9ULK6 438 aa12.16□□□□□ -0.46
MKS1-211ENST00000581761 LSM5Q9Y4Y9 91 aaKnown RBP12.16□□□□□ -0.46
MKS1-211ENST00000581761 PPIAL4AQ9Y536 164 aa12.16□□□□□ -0.46
MKS1-211ENST00000581761 MYO9AB2RTY4 2548 aa12.15□□□□□ -0.46
MKS1-211ENST00000581761 DUXBA0A1W2PPF3 345 aa12.15□□□□□ -0.46
MKS1-211ENST00000581761 KANTRA0A1W2PQU2 76 aa12.15□□□□□ -0.46
MKS1-211ENST00000581761 RNF212BA8MTL3 300 aa12.15□□□□□ -0.46
MKS1-211ENST00000581761 IGLV2-14P01704 120 aa12.15□□□□□ -0.46
MKS1-211ENST00000581761 HTR2BP41595 481 aa12.15□□□□□ -0.46
MKS1-211ENST00000581761 SWI5Q1ZZU3 235 aa12.15□□□□□ -0.46
MKS1-211ENST00000581761 KIAA2026Q5HYC2 2103 aa12.15□□□□□ -0.46
MKS1-211ENST00000581761 FAM219AQ8IW50 185 aa12.15□□□□□ -0.46
MKS1-211ENST00000581761 FOXRED2Q8IWF2 684 aa12.15□□□□□ -0.46
MKS1-211ENST00000581761 DRAM1Q8N682 238 aa12.15□□□□□ -0.46
MKS1-211ENST00000581761 ZNF645Q8N7E2 425 aa12.15□□□□□ -0.46
MKS1-211ENST00000581761 ZBTB34Q8NCN2 500 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms