RNA–Protein interactions for RNA: ENST00000581021.5

SS18-218, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-218ENST00000581021 THNSL2Q86YJ6 484 aa16.03■□□□□ 0.16
SS18-218ENST00000581021 LGALS14Q8TCE9 139 aa16.03■□□□□ 0.16
SS18-218ENST00000581021 IL1F10Q8WWZ1 152 aa16.03■□□□□ 0.16
SS18-218ENST00000581021 PTX4Q96A99 478 aa16.03■□□□□ 0.16
SS18-218ENST00000581021 GALMQ96C23 342 aa16.03■□□□□ 0.16
SS18-218ENST00000581021 CMSS1Q9BQ75 279 aaKnown RBP16.03■□□□□ 0.16
SS18-218ENST00000581021 ABHD14AQ9BUJ0 271 aa16.03■□□□□ 0.16
SS18-218ENST00000581021 PRSS22Q9GZN4 317 aa16.03■□□□□ 0.16
SS18-218ENST00000581021 IFI27L2Q9H2X8 130 aa16.03■□□□□ 0.16
SS18-218ENST00000581021 RIMS4Q9H426 269 aaPredicted RBP16.03■□□□□ 0.16
SS18-218ENST00000581021 OR1A1Q9P1Q5 309 aa16.03■□□□□ 0.16
SS18-218ENST00000581021 ELF5Q9UKW6 265 aaPredicted RBP16.03■□□□□ 0.16
SS18-218ENST00000581021 WNK1Q9H4A3 2382 aa16.02■□□□□ 0.16
SS18-218ENST00000581021 YPEL1O60688 119 aa16.02■□□□□ 0.16
SS18-218ENST00000581021 GAPDHP04406 335 aaKnown RBP16.02■□□□□ 0.16
SS18-218ENST00000581021 SCTP09683 121 aa16.02■□□□□ 0.16
SS18-218ENST00000581021 FAM106CPP0CH98 169 aa16.02■□□□□ 0.16
SS18-218ENST00000581021 VSIG10L2P0DP72 767 aa16.02■□□□□ 0.16
SS18-218ENST00000581021 HIST1H1DP16402 221 aaKnown RBP16.02■□□□□ 0.16
SS18-218ENST00000581021 HNF4GQ14541 408 aa16.02■□□□□ 0.16
SS18-218ENST00000581021 STEAP3Q658P3 488 aa16.02■□□□□ 0.16
SS18-218ENST00000581021 MOB3BQ86TA1 216 aa16.02■□□□□ 0.16
SS18-218ENST00000581021 LYG1Q8N1E2 194 aa16.02■□□□□ 0.16
SS18-218ENST00000581021 Q8N6K4 173 aa16.02■□□□□ 0.16
SS18-218ENST00000581021 C11orf44Q8N8P7 122 aa16.02■□□□□ 0.16
SS18-218ENST00000581021 YPEL2Q96QA6 119 aa16.02■□□□□ 0.16
SS18-218ENST00000581021 WNT10AQ9GZT5 417 aa16.02■□□□□ 0.16
SS18-218ENST00000581021 A0A075B6Q4 140 aa16.01■□□□□ 0.15
SS18-218ENST00000581021 OR3A3P47888 321 aa16.01■□□□□ 0.15
SS18-218ENST00000581021 EBI3Q14213 229 aa16.01■□□□□ 0.15
SS18-218ENST00000581021 HERPUD1Q15011 391 aa16.01■□□□□ 0.15
SS18-218ENST00000581021 ABCA11PQ4W5N1 156 aa16.01■□□□□ 0.15
SS18-218ENST00000581021 LY6G6FQ5SQ64 297 aa16.01■□□□□ 0.15
SS18-218ENST00000581021 IZUMO1Q8IYV9 350 aa16.01■□□□□ 0.15
SS18-218ENST00000581021 OR5H6Q8NGV6 325 aa16.01■□□□□ 0.15
SS18-218ENST00000581021 ABRACLQ9P1F3 81 aa16.01■□□□□ 0.15
SS18-218ENST00000581021 ST8SIA5O15466 376 aa16■□□□□ 0.15
SS18-218ENST00000581021 FCGR3AP08637 254 aa16■□□□□ 0.15
SS18-218ENST00000581021 TMEM11P17152 192 aa16■□□□□ 0.15
SS18-218ENST00000581021 IL3RAP26951 378 aa16■□□□□ 0.15
SS18-218ENST00000581021 RANBP1P43487 201 aa16■□□□□ 0.15
SS18-218ENST00000581021 HES1Q14469 280 aa16■□□□□ 0.15
SS18-218ENST00000581021 C11orf88Q6PI97 169 aa16■□□□□ 0.15
SS18-218ENST00000581021 MAFIPQ8WZ33 124 aa16■□□□□ 0.15
SS18-218ENST00000581021 SLC25A38Q96DW6 304 aa16■□□□□ 0.15
SS18-218ENST00000581021 EAF1Q96JC9 268 aaPredicted RBP16■□□□□ 0.15
SS18-218ENST00000581021 ATG5Q9H1Y0 275 aa16■□□□□ 0.15
SS18-218ENST00000581021 MOB4Q9Y3A3 225 aa16■□□□□ 0.15
SS18-218ENST00000581021 SAA2-SAA4A0A096LPE2 208 aa15.99■□□□□ 0.15
SS18-218ENST00000581021 LANCL1O43813 399 aa15.99■□□□□ 0.15
SS18-218ENST00000581021 AIREO43918 545 aa15.99■□□□□ 0.15
SS18-218ENST00000581021 SAA2P0DJI9 122 aaPredicted RBP15.99■□□□□ 0.15
SS18-218ENST00000581021 LSM3P62310 102 aaKnown RBP15.99■□□□□ 0.15
SS18-218ENST00000581021 TGIF2LXQ8IUE1 241 aa15.99■□□□□ 0.15
SS18-218ENST00000581021 C5orf56Q8N8D9 126 aa15.99■□□□□ 0.15
SS18-218ENST00000581021 AKR1E2Q96JD6 320 aa15.99■□□□□ 0.15
SS18-218ENST00000581021 ZNF251Q9BRH9 671 aa15.99■□□□□ 0.15
SS18-218ENST00000581021 MRPL20Q9BYC9 149 aaKnown RBP15.99■□□□□ 0.15
SS18-218ENST00000581021 VCX3AQ9NNX9 186 aa15.99■□□□□ 0.15
SS18-218ENST00000581021 SLC23A1Q9UHI7 598 aa15.99■□□□□ 0.15
SS18-218ENST00000581021 ZNF230Q9UIE0 474 aaPredicted RBP15.99■□□□□ 0.15
SS18-218ENST00000581021 IGKV1D-8A0A087WSZ0 117 aa15.98■□□□□ 0.15
SS18-218ENST00000581021 TSPAN15O95858 294 aa15.98■□□□□ 0.15
SS18-218ENST00000581021 LPLP06858 475 aa15.98■□□□□ 0.15
SS18-218ENST00000581021 CD3GP09693 182 aa15.98■□□□□ 0.15
SS18-218ENST00000581021 VDAC2P45880 294 aaPredicted RBP15.98■□□□□ 0.15
SS18-218ENST00000581021 LSAMPQ13449 338 aa15.98■□□□□ 0.15
SS18-218ENST00000581021 ZNF833PQ6ZTB9 187 aa15.98■□□□□ 0.15
SS18-218ENST00000581021 OR2AK2Q8NG84 335 aa15.98■□□□□ 0.15
SS18-218ENST00000581021 AGMATQ9BSE5 352 aa15.98■□□□□ 0.15
SS18-218ENST00000581021 METTL21EPA6NDL7 271 aa15.97■□□□□ 0.15
SS18-218ENST00000581021 TRDCB7Z8K6 153 aa15.97■□□□□ 0.15
SS18-218ENST00000581021 RGS11O94810 467 aa15.97■□□□□ 0.15
SS18-218ENST00000581021 CD28P10747 220 aa15.97■□□□□ 0.15
SS18-218ENST00000581021 CD1BP29016 333 aa15.97■□□□□ 0.15
SS18-218ENST00000581021 IDNKQ5T6J7 187 aa15.97■□□□□ 0.15
SS18-218ENST00000581021 OR13F1Q8NGS4 319 aa15.97■□□□□ 0.15
SS18-218ENST00000581021 C11orf54Q9H0W9 315 aaPredicted RBP15.97■□□□□ 0.15
SS18-218ENST00000581021 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP15.97■□□□□ 0.15
SS18-218ENST00000581021 PLSCR3Q9NRY6 295 aa15.97■□□□□ 0.15
SS18-218ENST00000581021 RHBDL2Q9NX52 303 aa15.97■□□□□ 0.15
SS18-218ENST00000581021 SERPINE3A8MV23 424 aa15.96■□□□□ 0.15
SS18-218ENST00000581021 TXNL1O43396 289 aa15.96■□□□□ 0.15
SS18-218ENST00000581021 RPS19P39019 145 aaKnown RBP15.96■□□□□ 0.15
SS18-218ENST00000581021 TIMM50Q3ZCQ8 353 aa15.96■□□□□ 0.15
SS18-218ENST00000581021 RPL39P5Q59GN2 51 aa15.96■□□□□ 0.15
SS18-218ENST00000581021 IGSF11Q5DX21 431 aa15.96■□□□□ 0.15
SS18-218ENST00000581021 C10orf99Q6UWK7 81 aa15.96■□□□□ 0.15
SS18-218ENST00000581021 ABHD14BQ96IU4 210 aa15.96■□□□□ 0.15
SS18-218ENST00000581021 NABP2Q9BQ15 211 aa15.96■□□□□ 0.15
SS18-218ENST00000581021 FUNDC2Q9BWH2 189 aa15.96■□□□□ 0.15
SS18-218ENST00000581021 MGAT4AQ9UM21 535 aa15.96■□□□□ 0.15
SS18-218ENST00000581021 TMEM235A6NFC5 223 aa15.95■□□□□ 0.14
SS18-218ENST00000581021 M0QZK8 103 aa15.95■□□□□ 0.14
SS18-218ENST00000581021 FABP7O15540 132 aa15.95■□□□□ 0.14
SS18-218ENST00000581021 GSTT2P0CG29 244 aa15.95■□□□□ 0.14
SS18-218ENST00000581021 GSTT2BP0CG30 244 aa15.95■□□□□ 0.14
SS18-218ENST00000581021 CEACAM6P40199 344 aa15.95■□□□□ 0.14
SS18-218ENST00000581021 NCS1P62166 190 aa15.95■□□□□ 0.14
SS18-218ENST00000581021 CDNFQ49AH0 187 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms