RNA–Protein interactions for RNA: ENST00000580095.5

TOP3A-209, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 1 (best)

Gene TOP3A, Length 2,929 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-209ENST00000580095 IGKV1-39P01597 117 aa8.88□□□□□ -0.99
TOP3A-209ENST00000580095 IGKV1D-39P04432 117 aa8.88□□□□□ -0.99
TOP3A-209ENST00000580095 LINC00205P59089 165 aa8.88□□□□□ -0.99
TOP3A-209ENST00000580095 RNPS1Q15287 305 aaKnown RBP8.88□□□□□ -0.99
TOP3A-209ENST00000580095 ADAM5Q6NVV9 412 aa8.88□□□□□ -0.99
TOP3A-209ENST00000580095 THNSL2Q86YJ6 484 aa8.88□□□□□ -0.99
TOP3A-209ENST00000580095 ZNF295-AS1Q8N0V1 137 aa8.88□□□□□ -0.99
TOP3A-209ENST00000580095 TPRX1Q8N7U7 411 aa8.88□□□□□ -0.99
TOP3A-209ENST00000580095 MDS2Q8NDY4 140 aa8.88□□□□□ -0.99
TOP3A-209ENST00000580095 PLPPR2Q96GM1 343 aa8.88□□□□□ -0.99
TOP3A-209ENST00000580095 RSG1Q9BU20 258 aa8.88□□□□□ -0.99
TOP3A-209ENST00000580095 CACNG5Q9UF02 275 aa8.88□□□□□ -0.99
TOP3A-209ENST00000580095 KLF13Q9Y2Y9 288 aaPredicted RBP8.88□□□□□ -0.99
TOP3A-209ENST00000580095 PIEZO2Q9H5I5 2752 aa8.88□□□□□ -0.99
TOP3A-209ENST00000580095 M0R296 226 aa8.88□□□□□ -0.99
TOP3A-209ENST00000580095 NKX2-8O15522 239 aa8.88□□□□□ -0.99
TOP3A-209ENST00000580095 NXPH2O95156 264 aa8.88□□□□□ -0.99
TOP3A-209ENST00000580095 METTL15P1P0C7V9 234 aa8.88□□□□□ -0.99
TOP3A-209ENST00000580095 CCL11P51671 97 aa8.88□□□□□ -0.99
TOP3A-209ENST00000580095 SRPXP78539 464 aa8.88□□□□□ -0.99
TOP3A-209ENST00000580095 ID3Q02535 119 aa8.88□□□□□ -0.99
TOP3A-209ENST00000580095 ZNF766Q5HY98 468 aa8.88□□□□□ -0.99
TOP3A-209ENST00000580095 PYY3Q5JQD4 70 aa8.88□□□□□ -0.99
TOP3A-209ENST00000580095 SLC25A24Q6NUK1 477 aa8.88□□□□□ -0.99
TOP3A-209ENST00000580095 FAM185AQ8N0U4 392 aa8.88□□□□□ -0.99
TOP3A-209ENST00000580095 FAM90A10PA6NDY2 464 aa8.87□□□□□ -0.99
TOP3A-209ENST00000580095 FAM90A18PA6NE21 464 aa8.87□□□□□ -0.99
TOP3A-209ENST00000580095 FAM90A16PA6NEW6 464 aa8.87□□□□□ -0.99
TOP3A-209ENST00000580095 FAM90A20PA6NIJ5 464 aa8.87□□□□□ -0.99
TOP3A-209ENST00000580095 FAM90A8PA6NJQ4 464 aa8.87□□□□□ -0.99
TOP3A-209ENST00000580095 FAM90A7PA6NKC0 464 aa8.87□□□□□ -0.99
TOP3A-209ENST00000580095 FAM90A22PA8MWA6 464 aa8.87□□□□□ -0.99
TOP3A-209ENST00000580095 FAM90A12PA8MX19 464 aa8.87□□□□□ -0.99
TOP3A-209ENST00000580095 FAM90A5PA8MXJ8 464 aa8.87□□□□□ -0.99
TOP3A-209ENST00000580095 FAM90A23PA8MXZ1 464 aa8.87□□□□□ -0.99
TOP3A-209ENST00000580095 IGLV2-14P01704 120 aa8.87□□□□□ -0.99
TOP3A-209ENST00000580095 FAM90A15PP0C7V4 464 aa8.87□□□□□ -0.99
TOP3A-209ENST00000580095 FAM90A13PP0C7W8 464 aa8.87□□□□□ -0.99
TOP3A-209ENST00000580095 FAM90A14PP0C7W9 464 aa8.87□□□□□ -0.99
TOP3A-209ENST00000580095 FAM90A24PP0C7X0 464 aa8.87□□□□□ -0.99
TOP3A-209ENST00000580095 FOLR2P14207 255 aa8.87□□□□□ -0.99
TOP3A-209ENST00000580095 CD46P15529 392 aa8.87□□□□□ -0.99
TOP3A-209ENST00000580095 HLA-DRB3P79483 266 aa8.87□□□□□ -0.99
TOP3A-209ENST00000580095 TESK1Q15569 626 aa8.87□□□□□ -0.99
TOP3A-209ENST00000580095 SAXO1Q8IYX7 474 aa8.87□□□□□ -0.99
TOP3A-209ENST00000580095 SPIN2AQ99865 258 aa8.87□□□□□ -0.99
TOP3A-209ENST00000580095 SPIN2BQ9BPZ2 258 aa8.87□□□□□ -0.99
TOP3A-209ENST00000580095 SLC35B3Q9H1N7 401 aa8.87□□□□□ -0.99
TOP3A-209ENST00000580095 RNF122Q9H9V4 155 aa8.87□□□□□ -0.99
TOP3A-209ENST00000580095 RNF115Q9Y4L5 304 aa8.87□□□□□ -0.99
TOP3A-209ENST00000580095 DOCK11Q5JSL3 2073 aa8.87□□□□□ -0.99
TOP3A-209ENST00000580095 OTOGLQ3ZCN5 2332 aa8.87□□□□□ -0.99
TOP3A-209ENST00000580095 PITX3O75364 302 aa8.87□□□□□ -0.99
TOP3A-209ENST00000580095 MPV17P39210 176 aa8.87□□□□□ -0.99
TOP3A-209ENST00000580095 RND3P61587 244 aa8.87□□□□□ -0.99
TOP3A-209ENST00000580095 PPP1CBP62140 327 aa8.87□□□□□ -0.99
TOP3A-209ENST00000580095 ARL16Q0P5N6 197 aa8.87□□□□□ -0.99
TOP3A-209ENST00000580095 ZNF266Q14584 549 aa8.87□□□□□ -0.99
TOP3A-209ENST00000580095 Q6P435 159 aa8.87□□□□□ -0.99
TOP3A-209ENST00000580095 SPSB3Q6PJ21 355 aa8.87□□□□□ -0.99
TOP3A-209ENST00000580095 H1FOOQ8IZA3 346 aaPredicted RBP8.87□□□□□ -0.99
TOP3A-209ENST00000580095 ZNF808Q8N4W9 903 aaPredicted RBP8.87□□□□□ -0.99
TOP3A-209ENST00000580095 SLC25A40Q8TBP6 338 aa8.87□□□□□ -0.99
TOP3A-209ENST00000580095 RBMXL1Q96E39 390 aaKnown RBP8.87□□□□□ -0.99
TOP3A-209ENST00000580095 VSIRQ9H7M9 311 aa8.87□□□□□ -0.99
TOP3A-209ENST00000580095 URGCP-MRPS24S4R325 110 aa8.87□□□□□ -0.99
TOP3A-209ENST00000580095 H0Y980 276 aa8.87□□□□□ -0.99
TOP3A-209ENST00000580095 PSPNO60542 156 aa8.87□□□□□ -0.99
TOP3A-209ENST00000580095 IGHV2-5P01817 119 aa8.87□□□□□ -0.99
TOP3A-209ENST00000580095 HEXAP06865 529 aa8.87□□□□□ -0.99
TOP3A-209ENST00000580095 IGHV1-2P23083 117 aa8.87□□□□□ -0.99
TOP3A-209ENST00000580095 CEACAM6P40199 344 aa8.87□□□□□ -0.99
TOP3A-209ENST00000580095 PMELP40967 661 aa8.87□□□□□ -0.99
TOP3A-209ENST00000580095 SULT1A1P50225 295 aa8.87□□□□□ -0.99
TOP3A-209ENST00000580095 FGF8P55075 233 aaPredicted RBP8.87□□□□□ -0.99
TOP3A-209ENST00000580095 SOX8P57073 446 aa8.87□□□□□ -0.99
TOP3A-209ENST00000580095 LBHQ53QV2 105 aaPredicted RBP8.87□□□□□ -0.99
TOP3A-209ENST00000580095 SOHLH1Q5JUK2 328 aa8.87□□□□□ -0.99
TOP3A-209ENST00000580095 Q6ZS49 121 aa8.87□□□□□ -0.99
TOP3A-209ENST00000580095 OR10V1Q8NGI7 309 aa8.87□□□□□ -0.99
TOP3A-209ENST00000580095 OR5D13Q8NGL4 314 aa8.87□□□□□ -0.99
TOP3A-209ENST00000580095 TRIB1Q96RU8 372 aa8.87□□□□□ -0.99
TOP3A-209ENST00000580095 UNKLQ9H9P5 680 aaKnown RBP8.87□□□□□ -0.99
TOP3A-209ENST00000580095 CHTOPQ9Y3Y2 248 aaKnown RBP8.87□□□□□ -0.99
TOP3A-209ENST00000580095 MMP24Q9Y5R2 645 aa8.87□□□□□ -0.99
TOP3A-209ENST00000580095 MPC1Q9Y5U8 109 aa8.87□□□□□ -0.99
TOP3A-209ENST00000580095 J3QT63 122 aa8.86□□□□□ -0.99
TOP3A-209ENST00000580095 SMPD2O60906 423 aa8.86□□□□□ -0.99
TOP3A-209ENST00000580095 IGKV1-5P01602 117 aa8.86□□□□□ -0.99
TOP3A-209ENST00000580095 ZNF883P0CG24 379 aa8.86□□□□□ -0.99
TOP3A-209ENST00000580095 DDTP30046 118 aa8.86□□□□□ -0.99
TOP3A-209ENST00000580095 IL24Q13007 206 aa8.86□□□□□ -0.99
TOP3A-209ENST00000580095 PSG7Q13046 419 aa8.86□□□□□ -0.99
TOP3A-209ENST00000580095 TBC1D28Q2M2D7 210 aa8.86□□□□□ -0.99
TOP3A-209ENST00000580095 OR1J1Q8NGS3 322 aa8.86□□□□□ -0.99
TOP3A-209ENST00000580095 SLC25A31Q9H0C2 315 aa8.86□□□□□ -0.99
TOP3A-209ENST00000580095 OBP2BQ9NPH6 170 aa8.86□□□□□ -0.99
TOP3A-209ENST00000580095 AKAP13Q12802 2813 aa8.86□□□□□ -0.99
TOP3A-209ENST00000580095 RBFOX3A6NFN3 312 aa8.86□□□□□ -0.99
TOP3A-209ENST00000580095 OR5B21A6NL26 309 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms