RNA–Protein interactions for RNA: ENST00000579743.2

GGA3-208, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-208ENST00000579743 RIMS4Q9H426 269 aaPredicted RBP10.76□□□□□ -0.69
GGA3-208ENST00000579743 PIPOXQ9P0Z9 390 aa10.76□□□□□ -0.69
GGA3-208ENST00000579743 MGAT4AQ9UM21 535 aa10.76□□□□□ -0.69
GGA3-208ENST00000579743 SEC14L6B5MCN3 397 aa10.75□□□□□ -0.69
GGA3-208ENST00000579743 RAB29O14966 203 aa10.75□□□□□ -0.69
GGA3-208ENST00000579743 NBR2O15453 112 aa10.75□□□□□ -0.69
GGA3-208ENST00000579743 BPNT1O95861 308 aa10.75□□□□□ -0.69
GGA3-208ENST00000579743 OR8U8P0C7N1 319 aa10.75□□□□□ -0.69
GGA3-208ENST00000579743 MC5RP33032 325 aa10.75□□□□□ -0.69
GGA3-208ENST00000579743 PPP1CCP36873 323 aaKnown RBP10.75□□□□□ -0.69
GGA3-208ENST00000579743 INSL3P51460 131 aa10.75□□□□□ -0.69
GGA3-208ENST00000579743 ACTBP60709 375 aa10.75□□□□□ -0.69
GGA3-208ENST00000579743 PLGLAQ15195 96 aa10.75□□□□□ -0.69
GGA3-208ENST00000579743 HSD17B12Q53GQ0 312 aa10.75□□□□□ -0.69
GGA3-208ENST00000579743 LIN54Q6MZP7 749 aa10.75□□□□□ -0.69
GGA3-208ENST00000579743 FAM71F2Q6NXP2 309 aa10.75□□□□□ -0.69
GGA3-208ENST00000579743 MOB1BQ7L9L4 216 aa10.75□□□□□ -0.69
GGA3-208ENST00000579743 MRPL30Q8TCC3 161 aaKnown RBP10.75□□□□□ -0.69
GGA3-208ENST00000579743 IL1F10Q8WWZ1 152 aa10.75□□□□□ -0.69
GGA3-208ENST00000579743 UBE2E2Q96LR5 201 aa10.75□□□□□ -0.69
GGA3-208ENST00000579743 DUX3Q96PT4 197 aa10.75□□□□□ -0.69
GGA3-208ENST00000579743 HSPB9Q9BQS6 159 aa10.75□□□□□ -0.69
GGA3-208ENST00000579743 URM1Q9BTM9 101 aaKnown RBP10.75□□□□□ -0.69
GGA3-208ENST00000579743 OR51J1Q9H342 316 aa10.75□□□□□ -0.69
GGA3-208ENST00000579743 PLEKHJ1Q9NW61 149 aa10.75□□□□□ -0.69
GGA3-208ENST00000579743 RNF150Q9ULK6 438 aa10.75□□□□□ -0.69
GGA3-208ENST00000579743 HLA-DRB1P01911 266 aa10.74□□□□□ -0.69
GGA3-208ENST00000579743 GNAO1P09471 354 aa10.74□□□□□ -0.69
GGA3-208ENST00000579743 SRMP19623 302 aa10.74□□□□□ -0.69
GGA3-208ENST00000579743 PSMB8P28062 276 aa10.74□□□□□ -0.69
GGA3-208ENST00000579743 HTR2CP28335 458 aa10.74□□□□□ -0.69
GGA3-208ENST00000579743 CD40LGP29965 261 aa10.74□□□□□ -0.69
GGA3-208ENST00000579743 VHLP40337 213 aa10.74□□□□□ -0.69
GGA3-208ENST00000579743 RPS27AP62979 156 aaKnown RBP10.74□□□□□ -0.69
GGA3-208ENST00000579743 TMEM267Q0VDI3 215 aaPredicted RBP10.74□□□□□ -0.69
GGA3-208ENST00000579743 SPHARQ15513 63 aa10.74□□□□□ -0.69
GGA3-208ENST00000579743 DEFB136Q30KP8 78 aa10.74□□□□□ -0.69
GGA3-208ENST00000579743 RNLSQ5VYX0 342 aa10.74□□□□□ -0.69
GGA3-208ENST00000579743 SIGIRRQ6IA17 410 aa10.74□□□□□ -0.69
GGA3-208ENST00000579743 FAM53AQ6NSI3 398 aaPredicted RBP10.74□□□□□ -0.69
GGA3-208ENST00000579743 CEACAM19Q7Z692 300 aa10.74□□□□□ -0.69
GGA3-208ENST00000579743 OR11H1Q8NG94 326 aa10.74□□□□□ -0.69
GGA3-208ENST00000579743 SETD6Q8TBK2 473 aa10.74□□□□□ -0.69
GGA3-208ENST00000579743 WWC2-AS2Q96NR7 200 aa10.74□□□□□ -0.69
GGA3-208ENST00000579743 NABP2Q9BQ15 211 aa10.74□□□□□ -0.69
GGA3-208ENST00000579743 FAAP24Q9BTP7 215 aa10.74□□□□□ -0.69
GGA3-208ENST00000579743 TMED9Q9BVK6 235 aa10.74□□□□□ -0.69
GGA3-208ENST00000579743 PARP11Q9NR21 331 aa10.74□□□□□ -0.69
GGA3-208ENST00000579743 VSIG4Q9Y279 399 aa10.74□□□□□ -0.69
GGA3-208ENST00000579743 TRAV41A0A0B4J266 112 aa10.73□□□□□ -0.69
GGA3-208ENST00000579743 PTGES3LE9PB15 166 aa10.73□□□□□ -0.69
GGA3-208ENST00000579743 HSPA12AO43301 675 aa10.73□□□□□ -0.69
GGA3-208ENST00000579743 ATP6V1G2O95670 118 aa10.73□□□□□ -0.69
GGA3-208ENST00000579743 CDK1P06493 297 aa10.73□□□□□ -0.69
GGA3-208ENST00000579743 GSTP1P09211 210 aaKnown RBP10.73□□□□□ -0.69
GGA3-208ENST00000579743 CHATP28329 748 aa10.73□□□□□ -0.69
GGA3-208ENST00000579743 BLVRBP30043 206 aaPredicted RBP10.73□□□□□ -0.69
GGA3-208ENST00000579743 ECI1P42126 302 aa10.73□□□□□ -0.69
GGA3-208ENST00000579743 GNMTQ14749 295 aa10.73□□□□□ -0.69
GGA3-208ENST00000579743 MED22Q15528 200 aa10.73□□□□□ -0.69
GGA3-208ENST00000579743 C5orf64Q2M2E5 130 aa10.73□□□□□ -0.69
GGA3-208ENST00000579743 C1orf100Q5SVJ3 147 aa10.73□□□□□ -0.69
GGA3-208ENST00000579743 OGFRL1Q5TC84 451 aaPredicted RBP10.73□□□□□ -0.69
GGA3-208ENST00000579743 ZNF833PQ6ZTB9 187 aa10.73□□□□□ -0.69
GGA3-208ENST00000579743 LYPD6Q86Y78 171 aa10.73□□□□□ -0.69
GGA3-208ENST00000579743 TCTEX1D1Q8N7M0 179 aa10.73□□□□□ -0.69
GGA3-208ENST00000579743 OR6M1Q8NGM8 313 aa10.73□□□□□ -0.69
GGA3-208ENST00000579743 FBLIM1Q8WUP2 373 aa10.73□□□□□ -0.69
GGA3-208ENST00000579743 EDARADDQ8WWZ3 215 aa10.73□□□□□ -0.69
GGA3-208ENST00000579743 MRPL20Q9BYC9 149 aaKnown RBP10.73□□□□□ -0.69
GGA3-208ENST00000579743 PLGRKTQ9HBL7 147 aa10.73□□□□□ -0.69
GGA3-208ENST00000579743 WSB1Q9Y6I7 421 aa10.73□□□□□ -0.69
GGA3-208ENST00000579743 SAA2-SAA4A0A096LPE2 208 aa10.72□□□□□ -0.69
GGA3-208ENST00000579743 OR5H14A6NHG9 310 aa10.72□□□□□ -0.69
GGA3-208ENST00000579743 H7C2Y5 167 aa10.72□□□□□ -0.69
GGA3-208ENST00000579743 CASQ2O14958 399 aaPredicted RBP10.72□□□□□ -0.69
GGA3-208ENST00000579743 RBBP9O75884 186 aa10.72□□□□□ -0.69
GGA3-208ENST00000579743 ARL6IP5O75915 188 aa10.72□□□□□ -0.69
GGA3-208ENST00000579743 SAA2P0DJI9 122 aaPredicted RBP10.72□□□□□ -0.69
GGA3-208ENST00000579743 VSIG8P0DPA2 414 aa10.72□□□□□ -0.69
GGA3-208ENST00000579743 ZBTB25P24278 435 aa10.72□□□□□ -0.69
GGA3-208ENST00000579743 MRPS15P82914 257 aaKnown RBP10.72□□□□□ -0.69
GGA3-208ENST00000579743 CFHR3Q02985 330 aa10.72□□□□□ -0.69
GGA3-208ENST00000579743 ZNF616Q08AN1 781 aa10.72□□□□□ -0.69
GGA3-208ENST00000579743 TRAM1Q15629 374 aa10.72□□□□□ -0.69
GGA3-208ENST00000579743 HMGN3Q15651 99 aa10.72□□□□□ -0.69
GGA3-208ENST00000579743 ZNF260Q3ZCT1 412 aa10.72□□□□□ -0.69
GGA3-208ENST00000579743 FAM27D1Q5T7N8 215 aa10.72□□□□□ -0.69
GGA3-208ENST00000579743 ZNF660Q6AZW8 331 aaPredicted RBP10.72□□□□□ -0.69
GGA3-208ENST00000579743 C6orf201Q7Z4U5 140 aa10.72□□□□□ -0.69
GGA3-208ENST00000579743 NPBQ8NG41 125 aa10.72□□□□□ -0.69
GGA3-208ENST00000579743 OR1N2Q8NGR9 330 aa10.72□□□□□ -0.69
GGA3-208ENST00000579743 ABHD5Q8WTS1 349 aa10.72□□□□□ -0.69
GGA3-208ENST00000579743 UFD1Q92890 307 aa10.72□□□□□ -0.69
GGA3-208ENST00000579743 SULT4A1Q9BR01 284 aa10.72□□□□□ -0.69
GGA3-208ENST00000579743 TM2D1Q9BX74 207 aa10.72□□□□□ -0.69
GGA3-208ENST00000579743 ANKRD60Q9BZ19 345 aa10.72□□□□□ -0.69
GGA3-208ENST00000579743 FKBP14Q9NWM8 211 aa10.72□□□□□ -0.69
GGA3-208ENST00000579743 SLC23A1Q9UHI7 598 aa10.72□□□□□ -0.69
GGA3-208ENST00000579743 TPRKBQ9Y3C4 175 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms