RNA–Protein interactions for RNA: ENST00000578985.5

IFT20-208, Transcript of intraflagellar transport 20, humanhuman

TSL 3 BASIC

Gene IFT20, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-208ENST00000578985 TOMM40LQ969M1 308 aa12.41□□□□□ -0.42
IFT20-208ENST00000578985 SLC23A1Q9UHI7 598 aa12.41□□□□□ -0.42
IFT20-208ENST00000578985 VPREB3Q9UKI3 123 aa12.41□□□□□ -0.42
IFT20-208ENST00000578985 IGKV1-6A0A0C4DH72 117 aa12.4□□□□□ -0.42
IFT20-208ENST00000578985 HSPA12AO43301 675 aa12.4□□□□□ -0.42
IFT20-208ENST00000578985 GPR137BO60478 399 aa12.4□□□□□ -0.42
IFT20-208ENST00000578985 GSTT2P0CG29 244 aa12.4□□□□□ -0.42
IFT20-208ENST00000578985 GSTT2BP0CG30 244 aa12.4□□□□□ -0.42
IFT20-208ENST00000578985 ZBTB25P24278 435 aa12.4□□□□□ -0.42
IFT20-208ENST00000578985 ACTG1P63261 375 aa12.4□□□□□ -0.42
IFT20-208ENST00000578985 LY6EQ16553 131 aa12.4□□□□□ -0.42
IFT20-208ENST00000578985 TMEM69Q5SWH9 247 aa12.4□□□□□ -0.42
IFT20-208ENST00000578985 Q6ZS49 121 aa12.4□□□□□ -0.42
IFT20-208ENST00000578985 ABHD14AQ9BUJ0 271 aa12.4□□□□□ -0.42
IFT20-208ENST00000578985 ST6GALNAC5Q9BVH7 336 aa12.4□□□□□ -0.42
IFT20-208ENST00000578985 CCDC59Q9P031 241 aaKnown RBP12.4□□□□□ -0.42
IFT20-208ENST00000578985 OR1A1Q9P1Q5 309 aa12.4□□□□□ -0.42
IFT20-208ENST00000578985 SMIM31A0A1B0GVY4 71 aa12.39□□□□□ -0.43
IFT20-208ENST00000578985 FAM181BA6NEQ2 426 aa12.39□□□□□ -0.43
IFT20-208ENST00000578985 CRYBA1P05813 215 aa12.39□□□□□ -0.43
IFT20-208ENST00000578985 ELK1P19419 428 aa12.39□□□□□ -0.43
IFT20-208ENST00000578985 BRS3P32247 399 aa12.39□□□□□ -0.43
IFT20-208ENST00000578985 CEACAM6P40199 344 aa12.39□□□□□ -0.43
IFT20-208ENST00000578985 RAB7AP51149 207 aa12.39□□□□□ -0.43
IFT20-208ENST00000578985 TAS2R20P59543 309 aa12.39□□□□□ -0.43
IFT20-208ENST00000578985 DIAPH2-AS1Q14236 149 aa12.39□□□□□ -0.43
IFT20-208ENST00000578985 LYG1Q8N1E2 194 aa12.39□□□□□ -0.43
IFT20-208ENST00000578985 OR2AK2Q8NG84 335 aa12.39□□□□□ -0.43
IFT20-208ENST00000578985 RBM38Q9H0Z9 239 aaKnown RBP12.39□□□□□ -0.43
IFT20-208ENST00000578985 CUBNO60494 3623 aa12.38□□□□□ -0.43
IFT20-208ENST00000578985 IGKV1D-8A0A087WSZ0 117 aa12.38□□□□□ -0.43
IFT20-208ENST00000578985 FAM25AB3EWG3 89 aa12.38□□□□□ -0.43
IFT20-208ENST00000578985 FAM25CB3EWG5 89 aa12.38□□□□□ -0.43
IFT20-208ENST00000578985 FAM25GB3EWG6 89 aa12.38□□□□□ -0.43
IFT20-208ENST00000578985 HSD17B6O14756 317 aa12.38□□□□□ -0.43
IFT20-208ENST00000578985 GAPDHP04406 335 aaKnown RBP12.38□□□□□ -0.43
IFT20-208ENST00000578985 PTHLHP12272 177 aa12.38□□□□□ -0.43
IFT20-208ENST00000578985 ZNF816Q0VGE8 651 aaPredicted RBP12.38□□□□□ -0.43
IFT20-208ENST00000578985 HERPUD1Q15011 391 aa12.38□□□□□ -0.43
IFT20-208ENST00000578985 IGSF11Q5DX21 431 aa12.38□□□□□ -0.43
IFT20-208ENST00000578985 OR8H3Q8N146 312 aa12.38□□□□□ -0.43
IFT20-208ENST00000578985 ST6GALNAC6Q969X2 333 aa12.38□□□□□ -0.43
IFT20-208ENST00000578985 CABLES2Q9BTV7 478 aa12.38□□□□□ -0.43
IFT20-208ENST00000578985 PARP12Q9H0J9 701 aaKnown RBP12.38□□□□□ -0.43
IFT20-208ENST00000578985 TCF19Q9Y242 345 aa12.38□□□□□ -0.43
IFT20-208ENST00000578985 A0A1W2PPI3 338 aa12.37□□□□□ -0.43
IFT20-208ENST00000578985 A6NDX4 124 aa12.37□□□□□ -0.43
IFT20-208ENST00000578985 ITGB1BP1O14713 200 aa12.37□□□□□ -0.43
IFT20-208ENST00000578985 TIMM23O14925 209 aa12.37□□□□□ -0.43
IFT20-208ENST00000578985 BET1O15155 118 aa12.37□□□□□ -0.43
IFT20-208ENST00000578985 DIRAS3O95661 229 aa12.37□□□□□ -0.43
IFT20-208ENST00000578985 LPLP06858 475 aa12.37□□□□□ -0.43
IFT20-208ENST00000578985 HKR1P10072 659 aa12.37□□□□□ -0.43
IFT20-208ENST00000578985 CD24P25063 80 aa12.37□□□□□ -0.43
IFT20-208ENST00000578985 REG1BP48304 166 aa12.37□□□□□ -0.43
IFT20-208ENST00000578985 ZNF137PP52743 207 aa12.37□□□□□ -0.43
IFT20-208ENST00000578985 RPL15P61313 204 aaKnown RBP12.37□□□□□ -0.43
IFT20-208ENST00000578985 LIAT1Q6ZQX7 453 aa12.37□□□□□ -0.43
IFT20-208ENST00000578985 OR10J5Q8NHC4 309 aa12.37□□□□□ -0.43
IFT20-208ENST00000578985 EDARADDQ8WWZ3 215 aa12.37□□□□□ -0.43
IFT20-208ENST00000578985 GCDHQ92947 438 aaPredicted RBP12.37□□□□□ -0.43
IFT20-208ENST00000578985 C11orf54Q9H0W9 315 aaPredicted RBP12.37□□□□□ -0.43
IFT20-208ENST00000578985 IFI27L2Q9H2X8 130 aa12.37□□□□□ -0.43
IFT20-208ENST00000578985 RDH8Q9NYR8 311 aa12.37□□□□□ -0.43
IFT20-208ENST00000578985 RSL24D1Q9UHA3 163 aaKnown RBP12.37□□□□□ -0.43
IFT20-208ENST00000578985 PITPNC1Q9UKF7 332 aa12.37□□□□□ -0.43
IFT20-208ENST00000578985 MRPS7Q9Y2R9 242 aaKnown RBP12.37□□□□□ -0.43
IFT20-208ENST00000578985 TRBV6-7A0A0A0MS04 114 aa12.36□□□□□ -0.43
IFT20-208ENST00000578985 IGHV1-3A0A0C4DH29 117 aa12.36□□□□□ -0.43
IFT20-208ENST00000578985 TMEM89A2RUT3 159 aa12.36□□□□□ -0.43
IFT20-208ENST00000578985 ST8SIA5O15466 376 aa12.36□□□□□ -0.43
IFT20-208ENST00000578985 LANCL1O43813 399 aa12.36□□□□□ -0.43
IFT20-208ENST00000578985 HLA-DQB1P01920 261 aa12.36□□□□□ -0.43
IFT20-208ENST00000578985 PRSS3P35030 304 aa12.36□□□□□ -0.43
IFT20-208ENST00000578985 CBX5P45973 191 aa12.36□□□□□ -0.43
IFT20-208ENST00000578985 DHRS7BQ6IAN0 325 aaPredicted RBP12.36□□□□□ -0.43
IFT20-208ENST00000578985 CCBE1Q6UXH8 406 aaPredicted RBP12.36□□□□□ -0.43
IFT20-208ENST00000578985 MOB3BQ86TA1 216 aa12.36□□□□□ -0.43
IFT20-208ENST00000578985 HOGA1Q86XE5 327 aa12.36□□□□□ -0.43
IFT20-208ENST00000578985 TMEM219Q86XT9 240 aa12.36□□□□□ -0.43
IFT20-208ENST00000578985 TGIF2LXQ8IUE1 241 aa12.36□□□□□ -0.43
IFT20-208ENST00000578985 ODF3L1Q8IXM7 274 aa12.36□□□□□ -0.43
IFT20-208ENST00000578985 DRAM1Q8N682 238 aa12.36□□□□□ -0.43
IFT20-208ENST00000578985 CAPSLQ8WWF8 208 aa12.36□□□□□ -0.43
IFT20-208ENST00000578985 RTN4IP1Q8WWV3 396 aaPredicted RBP12.36□□□□□ -0.43
IFT20-208ENST00000578985 TAF15Q92804 592 aaKnown RBP eCLIP12.36□□□□□ -0.43
IFT20-208ENST00000578985 GINS4Q9BRT9 223 aa12.36□□□□□ -0.43
IFT20-208ENST00000578985 MIXL1Q9H2W2 232 aa12.36□□□□□ -0.43
IFT20-208ENST00000578985 RAB18Q9NP72 206 aa12.36□□□□□ -0.43
IFT20-208ENST00000578985 C1RLQ9NZP8 487 aa12.36□□□□□ -0.43
IFT20-208ENST00000578985 EXTL2Q9UBQ6 330 aa12.36□□□□□ -0.43
IFT20-208ENST00000578985 MEIS3P1A6NDR6 274 aa12.35□□□□□ -0.43
IFT20-208ENST00000578985 ZNF701M0R085 212 aaPredicted RBP12.35□□□□□ -0.43
IFT20-208ENST00000578985 CTDSP2O14595 271 aa12.35□□□□□ -0.43
IFT20-208ENST00000578985 RGS5O15539 181 aa12.35□□□□□ -0.43
IFT20-208ENST00000578985 TXNL1O43396 289 aa12.35□□□□□ -0.43
IFT20-208ENST00000578985 CHST1O43916 411 aa12.35□□□□□ -0.43
IFT20-208ENST00000578985 CTXN2P0C2S0 81 aa12.35□□□□□ -0.43
IFT20-208ENST00000578985 FAM106CPP0CH98 169 aa12.35□□□□□ -0.43
IFT20-208ENST00000578985 OR3A3P47888 321 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 119.8 ms