RNA–Protein interactions for RNA: ENST00000578373.5

ERBB2-206, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 4,523 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-206ENST00000578373 SIP14410 1827 aa10.39□□□□□ -0.75
ERBB2-206ENST00000578373 ATP1A1-AS1Q5TC04 95 aa10.38□□□□□ -0.75
ERBB2-206ENST00000578373 CALHM1Q8IU99 346 aa10.38□□□□□ -0.75
ERBB2-206ENST00000578373 KDF1Q8NAX2 398 aaPredicted RBP10.38□□□□□ -0.75
ERBB2-206ENST00000578373 C10orf35Q96D05 121 aa10.38□□□□□ -0.75
ERBB2-206ENST00000578373 Q9N2K0 584 aa10.38□□□□□ -0.75
ERBB2-206ENST00000578373 PRDM6Q9NQX0 595 aa10.38□□□□□ -0.75
ERBB2-206ENST00000578373 IL36GQ9NZH8 169 aa10.38□□□□□ -0.75
ERBB2-206ENST00000578373 IL36RNQ9UBH0 155 aa10.38□□□□□ -0.75
ERBB2-206ENST00000578373 K7EQM0 130 aa10.38□□□□□ -0.75
ERBB2-206ENST00000578373 GAPDHP04406 335 aaKnown RBP10.38□□□□□ -0.75
ERBB2-206ENST00000578373 NSUN5P2Q63ZY6 315 aa10.38□□□□□ -0.75
ERBB2-206ENST00000578373 MRPL54Q6P161 138 aaKnown RBP10.38□□□□□ -0.75
ERBB2-206ENST00000578373 MOB3BQ86TA1 216 aa10.38□□□□□ -0.75
ERBB2-206ENST00000578373 TMEM251Q8N6I4 163 aa10.38□□□□□ -0.75
ERBB2-206ENST00000578373 HES4Q9HCC6 221 aa10.38□□□□□ -0.75
ERBB2-206ENST00000578373 NPTNQ9Y639 398 aa10.38□□□□□ -0.75
ERBB2-206ENST00000578373 IGKV3D-11A0A0A0MRZ8 115 aa10.38□□□□□ -0.75
ERBB2-206ENST00000578373 SMIM6P0DI80 62 aa10.38□□□□□ -0.75
ERBB2-206ENST00000578373 ORM2P19652 201 aa10.38□□□□□ -0.75
ERBB2-206ENST00000578373 REG1BP48304 166 aa10.38□□□□□ -0.75
ERBB2-206ENST00000578373 AMTP48728 403 aa10.38□□□□□ -0.75
ERBB2-206ENST00000578373 ZNF818PQ6ZRF7 136 aa10.38□□□□□ -0.75
ERBB2-206ENST00000578373 HIST1H2BAQ96A08 127 aa10.38□□□□□ -0.75
ERBB2-206ENST00000578373 GPR146Q96CH1 333 aa10.38□□□□□ -0.75
ERBB2-206ENST00000578373 SRD5A3Q9H8P0 318 aa10.38□□□□□ -0.75
ERBB2-206ENST00000578373 ZNF71Q9NQZ8 489 aaPredicted RBP10.38□□□□□ -0.75
ERBB2-206ENST00000578373 KIAA1456Q9P272 454 aa10.38□□□□□ -0.75
ERBB2-206ENST00000578373 NAT8Q9UHE5 227 aa10.38□□□□□ -0.75
ERBB2-206ENST00000578373 IGHV3-21A0A0B4J1V1 117 aa10.37□□□□□ -0.75
ERBB2-206ENST00000578373 TMPRSS2O15393 492 aa10.37□□□□□ -0.75
ERBB2-206ENST00000578373 PGA5P0DJD9 388 aa10.37□□□□□ -0.75
ERBB2-206ENST00000578373 PAQR4Q8N4S7 273 aaPredicted RBP10.37□□□□□ -0.75
ERBB2-206ENST00000578373 MISP3Q96FF7 219 aa10.37□□□□□ -0.75
ERBB2-206ENST00000578373 RHOVQ96L33 236 aa10.37□□□□□ -0.75
ERBB2-206ENST00000578373 OR4C12Q96R67 309 aa10.37□□□□□ -0.75
ERBB2-206ENST00000578373 CELA3AP09093 270 aa10.37□□□□□ -0.75
ERBB2-206ENST00000578373 SUMO1P63165 101 aaKnown RBP10.37□□□□□ -0.75
ERBB2-206ENST00000578373 FAM209BQ5JX69 171 aa10.37□□□□□ -0.75
ERBB2-206ENST00000578373 OR1L1Q8NH94 360 aa10.37□□□□□ -0.75
ERBB2-206ENST00000578373 MARVELD3Q96A59 401 aa10.37□□□□□ -0.75
ERBB2-206ENST00000578373 ANGPTL4Q9BY76 406 aa10.37□□□□□ -0.75
ERBB2-206ENST00000578373 TTTY12Q9BZ98 90 aa10.37□□□□□ -0.75
ERBB2-206ENST00000578373 IGKV1D-8A0A087WSZ0 117 aa10.37□□□□□ -0.75
ERBB2-206ENST00000578373 IGHV1-45A0A0A0MS14 117 aa10.37□□□□□ -0.75
ERBB2-206ENST00000578373 DNASE2O00115 360 aaPredicted RBP10.37□□□□□ -0.75
ERBB2-206ENST00000578373 SLC31A2O15432 143 aa10.37□□□□□ -0.75
ERBB2-206ENST00000578373 MRPS11P82912 194 aaKnown RBP10.37□□□□□ -0.75
ERBB2-206ENST00000578373 HFEQ30201 348 aa10.37□□□□□ -0.75
ERBB2-206ENST00000578373 ASPHD2Q6ICH7 369 aa10.37□□□□□ -0.75
ERBB2-206ENST00000578373 SLC23A3Q6PIS1 610 aa10.37□□□□□ -0.75
ERBB2-206ENST00000578373 SLC35E3Q7Z769 313 aa10.37□□□□□ -0.75
ERBB2-206ENST00000578373 GLRX5Q86SX6 157 aa10.37□□□□□ -0.75
ERBB2-206ENST00000578373 TIMD4Q96H15 378 aa10.37□□□□□ -0.75
ERBB2-206ENST00000578373 CDX2Q99626 313 aaPredicted RBP10.37□□□□□ -0.75
ERBB2-206ENST00000578373 RTBDNQ9BSG5 229 aaPredicted RBP10.37□□□□□ -0.75
ERBB2-206ENST00000578373 RNF126Q9BV68 326 aa10.37□□□□□ -0.75
ERBB2-206ENST00000578373 LRRK1Q38SD2 2015 aa10.37□□□□□ -0.75
ERBB2-206ENST00000578373 IGKV1-9A0A0C4DH69 117 aa10.37□□□□□ -0.75
ERBB2-206ENST00000578373 ADH4P08319 380 aa10.37□□□□□ -0.75
ERBB2-206ENST00000578373 PSG5Q15238 335 aa10.37□□□□□ -0.75
ERBB2-206ENST00000578373 IGFBP7Q16270 282 aa10.37□□□□□ -0.75
ERBB2-206ENST00000578373 VAMP8Q9BV40 100 aa10.37□□□□□ -0.75
ERBB2-206ENST00000578373 WNT5BQ9H1J7 359 aa10.37□□□□□ -0.75
ERBB2-206ENST00000578373 RNF122Q9H9V4 155 aa10.37□□□□□ -0.75
ERBB2-206ENST00000578373 GNG4P50150 75 aa10.36□□□□□ -0.75
ERBB2-206ENST00000578373 MRGPRGQ86SM5 289 aa10.36□□□□□ -0.75
ERBB2-206ENST00000578373 MOB3AQ96BX8 217 aa10.36□□□□□ -0.75
ERBB2-206ENST00000578373 ZNF552Q9H707 407 aaPredicted RBP10.36□□□□□ -0.75
ERBB2-206ENST00000578373 A0A0G2JMM0 328 aa10.36□□□□□ -0.75
ERBB2-206ENST00000578373 A0A1W2PPB8 328 aa10.36□□□□□ -0.75
ERBB2-206ENST00000578373 A0A1W2PRS3 328 aa10.36□□□□□ -0.75
ERBB2-206ENST00000578373 KIR3DP1A8MWS1 328 aa10.36□□□□□ -0.75
ERBB2-206ENST00000578373 PROB1E7EW31 1015 aa10.36□□□□□ -0.75
ERBB2-206ENST00000578373 PGLYRP1O75594 196 aaPredicted RBP10.36□□□□□ -0.75
ERBB2-206ENST00000578373 BCL2P10415 239 aa10.36□□□□□ -0.75
ERBB2-206ENST00000578373 COX7A1P24310 79 aa10.36□□□□□ -0.75
ERBB2-206ENST00000578373 FBXW9Q5XUX1 488 aa10.36□□□□□ -0.75
ERBB2-206ENST00000578373 CPEB3Q8NE35 698 aaKnown RBP10.36□□□□□ -0.75
ERBB2-206ENST00000578373 LEAP2Q969E1 77 aa10.36□□□□□ -0.75
ERBB2-206ENST00000578373 TIMP4Q99727 224 aa10.36□□□□□ -0.75
ERBB2-206ENST00000578373 SPAARA0A1B0GVQ0 90 aa10.36□□□□□ -0.75
ERBB2-206ENST00000578373 DUXBA0A1W2PPF3 345 aa10.36□□□□□ -0.75
ERBB2-206ENST00000578373 C5orf63A6NC05 138 aa10.36□□□□□ -0.75
ERBB2-206ENST00000578373 FAM157AC9JC47 383 aa10.36□□□□□ -0.75
ERBB2-206ENST00000578373 CSN3P07498 182 aa10.36□□□□□ -0.75
ERBB2-206ENST00000578373 FGF12P61328 243 aa10.36□□□□□ -0.75
ERBB2-206ENST00000578373 PCOLCEQ15113 449 aa10.36□□□□□ -0.75
ERBB2-206ENST00000578373 IQCJQ1A5X6 159 aa10.36□□□□□ -0.75
ERBB2-206ENST00000578373 CEACAM21Q3KPI0 293 aa10.36□□□□□ -0.75
ERBB2-206ENST00000578373 RNASEKQ6P5S7 137 aaKnown RBP10.36□□□□□ -0.75
ERBB2-206ENST00000578373 C5orf24Q7Z6I8 188 aa10.36□□□□□ -0.75
ERBB2-206ENST00000578373 WDR54Q9H977 334 aa10.36□□□□□ -0.75
ERBB2-206ENST00000578373 IL17BQ9UHF5 180 aa10.36□□□□□ -0.75
ERBB2-206ENST00000578373 PLXND1Q9Y4D7 1925 aa10.36□□□□□ -0.75
ERBB2-206ENST00000578373 DBX1A6NMT0 343 aa10.36□□□□□ -0.75
ERBB2-206ENST00000578373 CNN1P51911 297 aaKnown RBP10.36□□□□□ -0.75
ERBB2-206ENST00000578373 TPPP2P59282 170 aa10.36□□□□□ -0.75
ERBB2-206ENST00000578373 PNRC1Q12796 327 aaPredicted RBP10.36□□□□□ -0.75
ERBB2-206ENST00000578373 TMEM187Q14656 261 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms