RNA–Protein interactions for RNA: ENST00000578112.5

SMARCE1-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,384 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-214ENST00000578112 MT-ND4P03905 459 aa8.76□□□□□ -1.01
SMARCE1-214ENST00000578112 ALPLP05186 524 aa8.76□□□□□ -1.01
SMARCE1-214ENST00000578112 ATF4P18848 351 aaPredicted RBP8.76□□□□□ -1.01
SMARCE1-214ENST00000578112 HNF4GQ14541 408 aa8.76□□□□□ -1.01
SMARCE1-214ENST00000578112 ZNF260Q3ZCT1 412 aa8.76□□□□□ -1.01
SMARCE1-214ENST00000578112 UTF1Q5T230 341 aa8.76□□□□□ -1.01
SMARCE1-214ENST00000578112 CASC10Q5T4H9 136 aa8.76□□□□□ -1.01
SMARCE1-214ENST00000578112 LPCAT4Q643R3 524 aa8.76□□□□□ -1.01
SMARCE1-214ENST00000578112 PYHIN1Q6K0P9 492 aa8.76□□□□□ -1.01
SMARCE1-214ENST00000578112 THRSPQ92748 146 aa8.76□□□□□ -1.01
SMARCE1-214ENST00000578112 C6orf62Q9GZU0 229 aaPredicted RBP8.76□□□□□ -1.01
SMARCE1-214ENST00000578112 RPL36Q9Y3U8 105 aaKnown RBP8.76□□□□□ -1.01
SMARCE1-214ENST00000578112 AIPO00170 330 aa8.75□□□□□ -1.01
SMARCE1-214ENST00000578112 SC5DO75845 299 aa8.75□□□□□ -1.01
SMARCE1-214ENST00000578112 GTF2F2P13984 249 aa8.75□□□□□ -1.01
SMARCE1-214ENST00000578112 GABRB1P18505 474 aa8.75□□□□□ -1.01
SMARCE1-214ENST00000578112 ALDH3A2P51648 485 aa8.75□□□□□ -1.01
SMARCE1-214ENST00000578112 NPBQ8NG41 125 aa8.75□□□□□ -1.01
SMARCE1-214ENST00000578112 OR11H1Q8NG94 326 aa8.75□□□□□ -1.01
SMARCE1-214ENST00000578112 LHFPL5Q8TAF8 219 aa8.75□□□□□ -1.01
SMARCE1-214ENST00000578112 PTTG2Q9NZH5 202 aa8.75□□□□□ -1.01
SMARCE1-214ENST00000578112 JPT1Q9UK76 154 aa8.75□□□□□ -1.01
SMARCE1-214ENST00000578112 NOTCH3Q9UM47 2321 aa8.75□□□□□ -1.01
SMARCE1-214ENST00000578112 RGS11O94810 467 aa8.75□□□□□ -1.01
SMARCE1-214ENST00000578112 FSTP19883 344 aa8.75□□□□□ -1.01
SMARCE1-214ENST00000578112 BDKRB2P30411 391 aa8.75□□□□□ -1.01
SMARCE1-214ENST00000578112 POLR2IP36954 125 aaKnown RBP8.75□□□□□ -1.01
SMARCE1-214ENST00000578112 VHLP40337 213 aa8.75□□□□□ -1.01
SMARCE1-214ENST00000578112 GNG2P59768 71 aa8.75□□□□□ -1.01
SMARCE1-214ENST00000578112 KIAA0141Q14154 515 aaPredicted RBP8.75□□□□□ -1.01
SMARCE1-214ENST00000578112 PIGYQ3MUY2 71 aa8.75□□□□□ -1.01
SMARCE1-214ENST00000578112 C1orf146Q5VVC0 180 aa8.75□□□□□ -1.01
SMARCE1-214ENST00000578112 ZNF660Q6AZW8 331 aaPredicted RBP8.75□□□□□ -1.01
SMARCE1-214ENST00000578112 ZFP1Q6P2D0 407 aa8.75□□□□□ -1.01
SMARCE1-214ENST00000578112 AMIGO2Q86SJ2 522 aa8.75□□□□□ -1.01
SMARCE1-214ENST00000578112 CCDC28AQ8IWP9 274 aa8.75□□□□□ -1.01
SMARCE1-214ENST00000578112 MINDY2Q8NBR6 621 aa8.75□□□□□ -1.01
SMARCE1-214ENST00000578112 RFESDQ8TAC1 157 aa8.75□□□□□ -1.01
SMARCE1-214ENST00000578112 LEAP2Q969E1 77 aa8.75□□□□□ -1.01
SMARCE1-214ENST00000578112 FGF20Q9NP95 211 aaPredicted RBP8.75□□□□□ -1.01
SMARCE1-214ENST00000578112 NKX1-2Q9UD57 310 aaPredicted RBP8.75□□□□□ -1.01
SMARCE1-214ENST00000578112 MCRIP1C9JLW8 97 aa8.74□□□□□ -1.01
SMARCE1-214ENST00000578112 OVOL1O14753 267 aa8.74□□□□□ -1.01
SMARCE1-214ENST00000578112 CIB2O75838 187 aa8.74□□□□□ -1.01
SMARCE1-214ENST00000578112 OR7C1O76099 320 aaPredicted RBP8.74□□□□□ -1.01
SMARCE1-214ENST00000578112 OR8U9P0C7N5 309 aa8.74□□□□□ -1.01
SMARCE1-214ENST00000578112 BMI1P35226 326 aa8.74□□□□□ -1.01
SMARCE1-214ENST00000578112 ZNF93P35789 620 aaPredicted RBP8.74□□□□□ -1.01
SMARCE1-214ENST00000578112 EIF2B2P49770 351 aaKnown RBP8.74□□□□□ -1.01
SMARCE1-214ENST00000578112 HTD2P86397 168 aa8.74□□□□□ -1.01
SMARCE1-214ENST00000578112 RCHY1Q96PM5 261 aa8.74□□□□□ -1.01
SMARCE1-214ENST00000578112 CITED4Q96RK1 184 aa8.74□□□□□ -1.01
SMARCE1-214ENST00000578112 RNF5Q99942 180 aa8.74□□□□□ -1.01
SMARCE1-214ENST00000578112 ING3Q9NXR8 418 aa8.74□□□□□ -1.01
SMARCE1-214ENST00000578112 LINC00527Q9UJ94 153 aa8.74□□□□□ -1.01
SMARCE1-214ENST00000578112 LCE6AA0A183 80 aa8.73□□□□□ -1.01
SMARCE1-214ENST00000578112 LINC01548A6NM66 108 aa8.73□□□□□ -1.01
SMARCE1-214ENST00000578112 HSPB6O14558 160 aa8.73□□□□□ -1.01
SMARCE1-214ENST00000578112 NDUFA3O95167 84 aa8.73□□□□□ -1.01
SMARCE1-214ENST00000578112 LYL1P12980 280 aa8.73□□□□□ -1.01
SMARCE1-214ENST00000578112 MOGAT2Q3SYC2 334 aa8.73□□□□□ -1.01
SMARCE1-214ENST00000578112 DDI2Q5TDH0 399 aa8.73□□□□□ -1.01
SMARCE1-214ENST00000578112 FLYWCH2Q96CP2 140 aaKnown RBP8.73□□□□□ -1.01
SMARCE1-214ENST00000578112 HSPB9Q9BQS6 159 aa8.73□□□□□ -1.01
SMARCE1-214ENST00000578112 TAS2R4Q9NYW5 299 aa8.73□□□□□ -1.01
SMARCE1-214ENST00000578112 GHRLQ9UBU3 117 aa8.73□□□□□ -1.01
SMARCE1-214ENST00000578112 ING4Q9UNL4 249 aa8.73□□□□□ -1.01
SMARCE1-214ENST00000578112 LINC01619G3V211 115 aa8.73□□□□□ -1.01
SMARCE1-214ENST00000578112 ITGB1BP1O14713 200 aa8.73□□□□□ -1.01
SMARCE1-214ENST00000578112 LDLRAD4O15165 306 aa8.73□□□□□ -1.01
SMARCE1-214ENST00000578112 SLC22A1O15245 554 aa8.73□□□□□ -1.01
SMARCE1-214ENST00000578112 IGFBP3P17936 291 aaPredicted RBP8.73□□□□□ -1.01
SMARCE1-214ENST00000578112 LTC4SQ16873 150 aa8.73□□□□□ -1.01
SMARCE1-214ENST00000578112 C19orf54Q5BKX5 351 aa8.73□□□□□ -1.01
SMARCE1-214ENST00000578112 CD200R1LQ6Q8B3 271 aa8.73□□□□□ -1.01
SMARCE1-214ENST00000578112 TMPRSS11AQ6ZMR5 421 aa8.73□□□□□ -1.01
SMARCE1-214ENST00000578112 SATL1Q86VE3 508 aa8.73□□□□□ -1.01
SMARCE1-214ENST00000578112 RHOXF1Q8NHV9 184 aa8.73□□□□□ -1.01
SMARCE1-214ENST00000578112 ISYNA1Q9NPH2 558 aa8.73□□□□□ -1.01
SMARCE1-214ENST00000578112 MBNL3Q9NUK0 354 aaKnown RBP8.73□□□□□ -1.01
SMARCE1-214ENST00000578112 GNG12Q9UBI6 72 aa8.73□□□□□ -1.01
SMARCE1-214ENST00000578112 CKLFQ9UBR5 152 aa8.73□□□□□ -1.01
SMARCE1-214ENST00000578112 RNF150Q9ULK6 438 aa8.73□□□□□ -1.01
SMARCE1-214ENST00000578112 TRAV41A0A0B4J266 112 aa8.72□□□□□ -1.01
SMARCE1-214ENST00000578112 NBR2O15453 112 aa8.72□□□□□ -1.01
SMARCE1-214ENST00000578112 OGG1O15527 345 aa8.72□□□□□ -1.01
SMARCE1-214ENST00000578112 YPEL1O60688 119 aa8.72□□□□□ -1.01
SMARCE1-214ENST00000578112 PTBP1P26599 531 aaKnown RBP eCLIP8.72□□□□□ -1.012e-22■■■■■ 51.6
SMARCE1-214ENST00000578112 MED21Q13503 144 aa8.72□□□□□ -1.01
SMARCE1-214ENST00000578112 ACSM6Q6P461 480 aa8.72□□□□□ -1.01
SMARCE1-214ENST00000578112 DUX3Q96PT4 197 aa8.72□□□□□ -1.01
SMARCE1-214ENST00000578112 YPEL2Q96QA6 119 aa8.72□□□□□ -1.01
SMARCE1-214ENST00000578112 NEURL2Q9BR09 285 aa8.72□□□□□ -1.01
SMARCE1-214ENST00000578112 NUDT15Q9NV35 164 aa8.72□□□□□ -1.01
SMARCE1-214ENST00000578112 KCNIP1Q9NZI2 227 aa8.72□□□□□ -1.01
SMARCE1-214ENST00000578112 KIAA1456Q9P272 454 aa8.72□□□□□ -1.01
SMARCE1-214ENST00000578112 KMT2CQ8NEZ4 4911 aaKnown RBP8.72□□□□□ -1.01
SMARCE1-214ENST00000578112 TRBV5-5A0A0J9YX44 114 aa8.72□□□□□ -1.01
SMARCE1-214ENST00000578112 C12orf77C9JDV5 145 aa8.72□□□□□ -1.01
SMARCE1-214ENST00000578112 H3BUA1 57 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms