RNA–Protein interactions for RNA: ENST00000577001.1

PRPF8-216, Transcript of pre-mRNA processing factor 8, human

TSL 5

Gene PRPF8, Length 3,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRPF8-216	ENST00000577001	WDR86	Q86TI4	376 aa		12.55	□□□□□ -0.4
PRPF8-216	ENST00000577001	OR2D2	Q9H210	308 aa		12.55	□□□□□ -0.4
PRPF8-216	ENST00000577001	SH2D2A	Q9NP31	389 aa		12.55	□□□□□ -0.4
PRPF8-216	ENST00000577001	OR5H1	A6NKK0	313 aa		12.55	□□□□□ -0.4
PRPF8-216	ENST00000577001	CYTIP	O60759	359 aa		12.55	□□□□□ -0.4
PRPF8-216	ENST00000577001	CDS2	O95674	445 aa		12.55	□□□□□ -0.4
PRPF8-216	ENST00000577001	IGKV1-5	P01602	117 aa		12.55	□□□□□ -0.4
PRPF8-216	ENST00000577001	SSTR5	P35346	364 aa		12.55	□□□□□ -0.4
PRPF8-216	ENST00000577001	PMEL	P40967	661 aa		12.55	□□□□□ -0.4
PRPF8-216	ENST00000577001	CLDN18	P56856	261 aa		12.55	□□□□□ -0.4
PRPF8-216	ENST00000577001	CEACAM21	Q3KPI0	293 aa		12.55	□□□□□ -0.4
PRPF8-216	ENST00000577001	TCTEX1D2	Q8WW35	142 aa		12.55	□□□□□ -0.4
PRPF8-216	ENST00000577001	SF3B5	Q9BWJ5	86 aa	Known RBP	12.55	□□□□□ -0.4
PRPF8-216	ENST00000577001	C1QTNF5	Q9BXJ0	243 aa		12.55	□□□□□ -0.4
PRPF8-216	ENST00000577001	TUBA4B	Q9H853	241 aa		12.55	□□□□□ -0.4
PRPF8-216	ENST00000577001	WASF3	Q9UPY6	502 aa		12.55	□□□□□ -0.4
PRPF8-216	ENST00000577001	IGHV3OR15-7	A0A075B7D8	119 aa		12.54	□□□□□ -0.4
PRPF8-216	ENST00000577001	IFITM10	A6NMD0	228 aa		12.54	□□□□□ -0.4
PRPF8-216	ENST00000577001	ST8SIA5	O15466	376 aa		12.54	□□□□□ -0.4
PRPF8-216	ENST00000577001	PSPN	O60542	156 aa		12.54	□□□□□ -0.4
PRPF8-216	ENST00000577001	SOD3	P08294	240 aa		12.54	□□□□□ -0.4
PRPF8-216	ENST00000577001	CD33	P20138	364 aa		12.54	□□□□□ -0.4
PRPF8-216	ENST00000577001	ZNF726P1	Q15940	193 aa		12.54	□□□□□ -0.4
PRPF8-216	ENST00000577001	PYY3	Q5JQD4	70 aa		12.54	□□□□□ -0.4
PRPF8-216	ENST00000577001	FRZB	Q92765	325 aa		12.54	□□□□□ -0.4
PRPF8-216	ENST00000577001	SLC25A31	Q9H0C2	315 aa		12.54	□□□□□ -0.4
PRPF8-216	ENST00000577001	RBKS	Q9H477	322 aa		12.54	□□□□□ -0.4
PRPF8-216	ENST00000577001	ADAMTS20	P59510	1910 aa		12.54	□□□□□ -0.4
PRPF8-216	ENST00000577001	UTF1	Q5T230	341 aa		12.54	□□□□□ -0.4
PRPF8-216	ENST00000577001	RTL6	Q6ICC9	239 aa		12.54	□□□□□ -0.4
PRPF8-216	ENST00000577001	HAPLN4	Q86UW8	402 aa		12.54	□□□□□ -0.4
PRPF8-216	ENST00000577001	TMEM37	Q8WXS4	190 aa		12.54	□□□□□ -0.4
PRPF8-216	ENST00000577001	GGACT	Q9BVM4	153 aa		12.54	□□□□□ -0.4
PRPF8-216	ENST00000577001	NTN3	O00634	580 aa	Predicted RBP	12.54	□□□□□ -0.4
PRPF8-216	ENST00000577001	IFNA17	P01571	189 aa		12.54	□□□□□ -0.4
PRPF8-216	ENST00000577001	CHRNA7	P36544	502 aa		12.54	□□□□□ -0.4
PRPF8-216	ENST00000577001	B2M	P61769	119 aa		12.54	□□□□□ -0.4
PRPF8-216	ENST00000577001	RPL30	P62888	115 aa	Known RBP	12.54	□□□□□ -0.4
PRPF8-216	ENST00000577001	ZNF295-AS1	Q8N0V1	137 aa		12.54	□□□□□ -0.4
PRPF8-216	ENST00000577001	KCNE4	Q8WWG9	221 aa		12.54	□□□□□ -0.4
PRPF8-216	ENST00000577001	GTF3A	Q92664	365 aa	Known RBP	12.54	□□□□□ -0.4
PRPF8-216	ENST00000577001	LHX4	Q969G2	390 aa		12.54	□□□□□ -0.4
PRPF8-216	ENST00000577001	APOBEC3D	Q96AK3	386 aa	Predicted RBP	12.54	□□□□□ -0.4
PRPF8-216	ENST00000577001	ZNF703	Q9H7S9	590 aa	Predicted RBP	12.54	□□□□□ -0.4
PRPF8-216	ENST00000577001	ATP23	Q9Y6H3	246 aa		12.54	□□□□□ -0.4
PRPF8-216	ENST00000577001		A0A1W2PPQ1	181 aa		12.53	□□□□□ -0.4
PRPF8-216	ENST00000577001	TNFSF15	O95150	251 aa		12.53	□□□□□ -0.4
PRPF8-216	ENST00000577001	IGKV1D-33	P01593	117 aa		12.53	□□□□□ -0.4
PRPF8-216	ENST00000577001	IGKV1-33	P01594	117 aa		12.53	□□□□□ -0.4
PRPF8-216	ENST00000577001	AGA	P20933	346 aa		12.53	□□□□□ -0.4
PRPF8-216	ENST00000577001	S100A2	P29034	98 aa		12.53	□□□□□ -0.4
PRPF8-216	ENST00000577001	MPV17	P39210	176 aa		12.53	□□□□□ -0.4
PRPF8-216	ENST00000577001	ELOB	Q15370	118 aa		12.53	□□□□□ -0.4
PRPF8-216	ENST00000577001	NMS	Q5H8A3	153 aa		12.53	□□□□□ -0.4
PRPF8-216	ENST00000577001	FOXL2NB	Q6ZUU3	175 aa		12.53	□□□□□ -0.4
PRPF8-216	ENST00000577001	SCCPDH	Q8NBX0	429 aa		12.53	□□□□□ -0.4
PRPF8-216	ENST00000577001	DEFB108B	Q8NET1	73 aa		12.53	□□□□□ -0.4
PRPF8-216	ENST00000577001	OR2W1	Q9Y3N9	320 aa		12.53	□□□□□ -0.4
PRPF8-216	ENST00000577001	COL6A6	A6NMZ7	2263 aa		12.53	□□□□□ -0.4
PRPF8-216	ENST00000577001	ASH1L	Q9NR48	2969 aa	Known RBP	12.53	□□□□□ -0.4
PRPF8-216	ENST00000577001	CLEC18A	A5D8T8	446 aa		12.53	□□□□□ -0.4
PRPF8-216	ENST00000577001	ZNF705G	A8MUZ8	300 aa	Predicted RBP	12.53	□□□□□ -0.4
PRPF8-216	ENST00000577001	SYNGR2	O43760	224 aa		12.53	□□□□□ -0.4
PRPF8-216	ENST00000577001	SERPINA7	P05543	415 aa		12.53	□□□□□ -0.4
PRPF8-216	ENST00000577001	TFF3	Q07654	80 aa		12.53	□□□□□ -0.4
PRPF8-216	ENST00000577001	BAX	Q07812	192 aa		12.53	□□□□□ -0.4
PRPF8-216	ENST00000577001	RNF212	Q495C1	297 aa		12.53	□□□□□ -0.4
PRPF8-216	ENST00000577001	DCAF10	Q5QP82	559 aa		12.53	□□□□□ -0.4
PRPF8-216	ENST00000577001	ABLIM2	Q6H8Q1	611 aa		12.53	□□□□□ -0.4
PRPF8-216	ENST00000577001	CLEC18C	Q8NCF0	446 aa		12.53	□□□□□ -0.4
PRPF8-216	ENST00000577001	CCDC54	Q8NEL0	328 aa		12.53	□□□□□ -0.4
PRPF8-216	ENST00000577001	OR51G1	Q8NGK1	321 aa		12.53	□□□□□ -0.4
PRPF8-216	ENST00000577001	SLC25A40	Q8TBP6	338 aa		12.53	□□□□□ -0.4
PRPF8-216	ENST00000577001	POM121L2	Q96KW2	1035 aa		12.53	□□□□□ -0.4
PRPF8-216	ENST00000577001	TOLLIP	Q9H0E2	274 aa		12.53	□□□□□ -0.4
PRPF8-216	ENST00000577001	ANKRD11	Q6UB99	2663 aa	Predicted RBP	12.53	□□□□□ -0.4
PRPF8-216	ENST00000577001	LNP1	A1A4G5	178 aa		12.52	□□□□□ -0.4
PRPF8-216	ENST00000577001	ZG16	O60844	167 aa		12.52	□□□□□ -0.4
PRPF8-216	ENST00000577001	TRGC1	P0CF51	173 aa		12.52	□□□□□ -0.4
PRPF8-216	ENST00000577001	IL2RG	P31785	369 aa		12.52	□□□□□ -0.4
PRPF8-216	ENST00000577001	EIF2S3	P41091	472 aa	Known RBP	12.52	□□□□□ -0.4
PRPF8-216	ENST00000577001	ECI1	P42126	302 aa		12.52	□□□□□ -0.4
PRPF8-216	ENST00000577001	MUCL1	Q96DR8	90 aa		12.52	□□□□□ -0.4
PRPF8-216	ENST00000577001	SPIN2A	Q99865	258 aa		12.52	□□□□□ -0.4
PRPF8-216	ENST00000577001	SPIN2B	Q9BPZ2	258 aa		12.52	□□□□□ -0.4
PRPF8-216	ENST00000577001	PATZ1	Q9HBE1	687 aa	Known RBP	12.52	□□□□□ -0.4
PRPF8-216	ENST00000577001	PCSK5	Q92824	1860 aa		12.52	□□□□□ -0.4
PRPF8-216	ENST00000577001	NUDT19	A8MXV4	375 aa		12.52	□□□□□ -0.41
PRPF8-216	ENST00000577001	IL18BP	O95998	194 aa		12.52	□□□□□ -0.41
PRPF8-216	ENST00000577001	NAPSA	O96009	420 aa		12.52	□□□□□ -0.41
PRPF8-216	ENST00000577001	FAM3B	P58499	235 aa	Predicted RBP	12.52	□□□□□ -0.41
PRPF8-216	ENST00000577001	C1orf210	Q8IVY1	113 aa		12.52	□□□□□ -0.41
PRPF8-216	ENST00000577001	TRIB1	Q96RU8	372 aa		12.52	□□□□□ -0.41
PRPF8-216	ENST00000577001	PRO3102	Q9H379	93 aa		12.52	□□□□□ -0.41
PRPF8-216	ENST00000577001	RNF122	Q9H9V4	155 aa		12.52	□□□□□ -0.41
PRPF8-216	ENST00000577001	RALY	Q9UKM9	306 aa	Known RBP	12.52	□□□□□ -0.41
PRPF8-216	ENST00000577001	KLF2	Q9Y5W3	355 aa	Predicted RBP	12.52	□□□□□ -0.41
PRPF8-216	ENST00000577001	ATRX	P46100	2492 aa		12.52	□□□□□ -0.41
PRPF8-216	ENST00000577001	SPINK4	O60575	86 aa		12.52	□□□□□ -0.41
PRPF8-216	ENST00000577001	GLIPR1	P48060	266 aa		12.52	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms