RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 MEF2BQ02080 365 aaPredicted RBP15.42■□□□□ 0.06
ATPAF1-214ENST00000576409 WISP1O95388 367 aa15.42■□□□□ 0.06
ATPAF1-214ENST00000576409 ZNF83P51522 516 aa15.42■□□□□ 0.06
ATPAF1-214ENST00000576409 RPS23P62266 143 aaKnown RBP15.42■□□□□ 0.06
ATPAF1-214ENST00000576409 H1FOOQ8IZA3 346 aaPredicted RBP15.42■□□□□ 0.06
ATPAF1-214ENST00000576409 LRRC29Q8WV35 223 aa15.42■□□□□ 0.06
ATPAF1-214ENST00000576409 TCFL5Q9UL49 500 aa15.42■□□□□ 0.06
ATPAF1-214ENST00000576409 DEFA4P12838 97 aa15.41■□□□□ 0.06
ATPAF1-214ENST00000576409 FOXO1Q12778 655 aa15.41■□□□□ 0.06
ATPAF1-214ENST00000576409 RTP5Q14D33 572 aa15.41■□□□□ 0.06
ATPAF1-214ENST00000576409 RNASEKQ6P5S7 137 aaKnown RBP15.41■□□□□ 0.06
ATPAF1-214ENST00000576409 C10orf35Q96D05 121 aa15.41■□□□□ 0.06
ATPAF1-214ENST00000576409 METTL1Q9UBP6 276 aaKnown RBP15.41■□□□□ 0.06
ATPAF1-214ENST00000576409 OR5B21A6NL26 309 aa15.41■□□□□ 0.06
ATPAF1-214ENST00000576409 BOD1Q96IK1 185 aa15.41■□□□□ 0.06
ATPAF1-214ENST00000576409 SHISA7A6NL88 538 aa15.41■□□□□ 0.06
ATPAF1-214ENST00000576409 PROB1E7EW31 1015 aa15.41■□□□□ 0.06
ATPAF1-214ENST00000576409 SELENOHQ8IZQ5 122 aaKnown RBP15.41■□□□□ 0.06
ATPAF1-214ENST00000576409 OR52L2PQ8NGH6 319 aa15.41■□□□□ 0.06
ATPAF1-214ENST00000576409 R3HDM4Q96D70 268 aa15.41■□□□□ 0.06
ATPAF1-214ENST00000576409 SRXN1Q9BYN0 137 aa15.41■□□□□ 0.06
ATPAF1-214ENST00000576409 TRAV38-1A0A0B4J264 116 aa15.4■□□□□ 0.06
ATPAF1-214ENST00000576409 A0A1B0GU03 582 aa15.4■□□□□ 0.06
ATPAF1-214ENST00000576409 MEOX1P50221 254 aa15.4■□□□□ 0.06
ATPAF1-214ENST00000576409 B2MP61769 119 aa15.4■□□□□ 0.06
ATPAF1-214ENST00000576409 OR5I1Q13606 314 aa15.4■□□□□ 0.06
ATPAF1-214ENST00000576409 FHL1Q13642 323 aa15.4■□□□□ 0.06
ATPAF1-214ENST00000576409 SF3B5Q9BWJ5 86 aaKnown RBP15.4■□□□□ 0.06
ATPAF1-214ENST00000576409 LYRM2Q9NU23 88 aaPredicted RBP15.4■□□□□ 0.06
ATPAF1-214ENST00000576409 B4DEV8 164 aa15.4■□□□□ 0.06
ATPAF1-214ENST00000576409 APELAP0DMC3 54 aa15.4■□□□□ 0.06
ATPAF1-214ENST00000576409 ADCYAP1P18509 176 aa15.4■□□□□ 0.06
ATPAF1-214ENST00000576409 GNG4P50150 75 aa15.4■□□□□ 0.06
ATPAF1-214ENST00000576409 TAS2R45P59539 299 aa15.4■□□□□ 0.06
ATPAF1-214ENST00000576409 SUPT4H1P63272 117 aaKnown RBP15.4■□□□□ 0.06
ATPAF1-214ENST00000576409 BLNKQ8WV28 456 aa15.4■□□□□ 0.06
ATPAF1-214ENST00000576409 CBLN4Q9NTU7 201 aa15.4■□□□□ 0.06
ATPAF1-214ENST00000576409 CNIH1O95406 144 aa15.4■□□□□ 0.06
ATPAF1-214ENST00000576409 CYB5R3P00387 301 aaPredicted RBP15.4■□□□□ 0.06
ATPAF1-214ENST00000576409 HSPB1P04792 205 aaKnown RBP15.4■□□□□ 0.06
ATPAF1-214ENST00000576409 ATG101Q9BSB4 218 aa15.4■□□□□ 0.06
ATPAF1-214ENST00000576409 HELZP42694 1942 aaKnown RBP15.4■□□□□ 0.06
ATPAF1-214ENST00000576409 LOC102724200A0A096LPH7 203 aaPredicted RBP15.39■□□□□ 0.05
ATPAF1-214ENST00000576409 A0A1W2PQM1 296 aa15.39■□□□□ 0.05
ATPAF1-214ENST00000576409 CHEK1O14757 476 aa15.39■□□□□ 0.05
ATPAF1-214ENST00000576409 MPLP40238 635 aa15.39■□□□□ 0.05
ATPAF1-214ENST00000576409 PSG5Q15238 335 aa15.39■□□□□ 0.05
ATPAF1-214ENST00000576409 STUMQ69YW2 141 aa15.39■□□□□ 0.05
ATPAF1-214ENST00000576409 OR10X1Q8NGY0 326 aa15.39■□□□□ 0.05
ATPAF1-214ENST00000576409 VOPP1Q96AW1 172 aa15.39■□□□□ 0.05
ATPAF1-214ENST00000576409 GRIFINA4D1Z8 144 aa15.39■□□□□ 0.05
ATPAF1-214ENST00000576409 SNURFLB1AK76 121 aa15.39■□□□□ 0.05
ATPAF1-214ENST00000576409 HES1Q14469 280 aa15.39■□□□□ 0.05
ATPAF1-214ENST00000576409 FGFRL1Q8N441 504 aa15.39■□□□□ 0.05
ATPAF1-214ENST00000576409 ZDHHC8Q9ULC8 765 aa15.39■□□□□ 0.05
ATPAF1-214ENST00000576409 MPC1Q9Y5U8 109 aa15.39■□□□□ 0.05
ATPAF1-214ENST00000576409 SCGB2A2Q13296 93 aa15.39■□□□□ 0.05
ATPAF1-214ENST00000576409 KIAA1644Q3SXP7 199 aa15.39■□□□□ 0.05
ATPAF1-214ENST00000576409 MAFAQ8NHW3 353 aaPredicted RBP15.39■□□□□ 0.05
ATPAF1-214ENST00000576409 HES7Q9BYE0 225 aa15.39■□□□□ 0.05
ATPAF1-214ENST00000576409 FGF16O43320 207 aa15.39■□□□□ 0.05
ATPAF1-214ENST00000576409 FAM157CP0CG43 387 aa15.39■□□□□ 0.05
ATPAF1-214ENST00000576409 GFI1BQ5VTD9 330 aa15.39■□□□□ 0.05
ATPAF1-214ENST00000576409 HS3ST3B1Q9Y662 390 aa15.39■□□□□ 0.05
ATPAF1-214ENST00000576409 IGKV3D-11A0A0A0MRZ8 115 aa15.38■□□□□ 0.05
ATPAF1-214ENST00000576409 CTXND1A0A1B0GTU2 59 aa15.38■□□□□ 0.05
ATPAF1-214ENST00000576409 COLCA2A8K830 154 aa15.38■□□□□ 0.05
ATPAF1-214ENST00000576409 NPIPB7O75200 414 aa15.38■□□□□ 0.05
ATPAF1-214ENST00000576409 HAND1O96004 215 aa15.38■□□□□ 0.05
ATPAF1-214ENST00000576409 CSN3P07498 182 aa15.38■□□□□ 0.05
ATPAF1-214ENST00000576409 OR5A2Q8NGI9 324 aa15.38■□□□□ 0.05
ATPAF1-214ENST00000576409 Q8WTZ3 238 aa15.38■□□□□ 0.05
ATPAF1-214ENST00000576409 RAB24Q969Q5 203 aa15.38■□□□□ 0.05
ATPAF1-214ENST00000576409 MOB1BQ7L9L4 216 aa15.38■□□□□ 0.05
ATPAF1-214ENST00000576409 TIPARPQ7Z3E1 657 aaKnown RBP15.38■□□□□ 0.05
ATPAF1-214ENST00000576409 CISD2Q8N5K1 135 aaKnown RBP15.38■□□□□ 0.05
ATPAF1-214ENST00000576409 CYTL1Q9NRR1 136 aa15.38■□□□□ 0.05
ATPAF1-214ENST00000576409 WDR90Q96KV7 1748 aa15.38■□□□□ 0.05
ATPAF1-214ENST00000576409 SERTM2A0A1B0GWG4 89 aa15.38■□□□□ 0.05
ATPAF1-214ENST00000576409 GATCO43716 136 aaKnown RBP15.38■□□□□ 0.05
ATPAF1-214ENST00000576409 FNDC7Q5VTL7 733 aa15.38■□□□□ 0.05
ATPAF1-214ENST00000576409 Q6ZN92 141 aa15.38■□□□□ 0.05
ATPAF1-214ENST00000576409 SLC25A40Q8TBP6 338 aa15.38■□□□□ 0.05
ATPAF1-214ENST00000576409 ZNF581Q9P0T4 197 aa15.38■□□□□ 0.05
ATPAF1-214ENST00000576409 USF3Q68DE3 2245 aa15.38■□□□□ 0.05
ATPAF1-214ENST00000576409 COX7A2P2O60397 106 aa15.37■□□□□ 0.05
ATPAF1-214ENST00000576409 FGF12P61328 243 aa15.37■□□□□ 0.05
ATPAF1-214ENST00000576409 ERHP84090 104 aaKnown RBP15.37■□□□□ 0.05
ATPAF1-214ENST00000576409 IGFBP7Q16270 282 aa15.37■□□□□ 0.05
ATPAF1-214ENST00000576409 TRAT1Q6PIZ9 186 aa15.37■□□□□ 0.05
ATPAF1-214ENST00000576409 Q8IYB0 196 aa15.37■□□□□ 0.05
ATPAF1-214ENST00000576409 CARFQ8N187 725 aa15.37■□□□□ 0.05
ATPAF1-214ENST00000576409 CT55Q8WUE5 264 aa15.37■□□□□ 0.05
ATPAF1-214ENST00000576409 TAF15Q92804 592 aaKnown RBP eCLIP15.37■□□□□ 0.05
ATPAF1-214ENST00000576409 ZNF355PQ9NSJ1 428 aa15.37■□□□□ 0.05
ATPAF1-214ENST00000576409 DECR2Q9NUI1 292 aa15.37■□□□□ 0.05
ATPAF1-214ENST00000576409 J3QT63 122 aa15.37■□□□□ 0.05
ATPAF1-214ENST00000576409 RFPL3SP0C7P2 107 aa15.37■□□□□ 0.05
ATPAF1-214ENST00000576409 SPNS3Q6ZMD2 512 aa15.37■□□□□ 0.05
ATPAF1-214ENST00000576409 WFDC8Q8IUA0 241 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms