RNA–Protein interactions for RNA: ENST00000574933.1

CCDC40-213, Transcript of coiled-coil domain containing 40, humanhuman

TSL 3

Gene CCDC40, Length 326 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-213ENST00000574933 FCAMRQ8WWV6 532 aa14.75□□□□□ -0.05
CCDC40-213ENST00000574933 OR1A1Q9P1Q5 309 aa14.75□□□□□ -0.05
CCDC40-213ENST00000574933 ZNF107Q9UII5 783 aaPredicted RBP14.75□□□□□ -0.05
CCDC40-213ENST00000574933 A0A1W2PRD5 423 aa14.74□□□□□ -0.05
CCDC40-213ENST00000574933 A0A1W2PRF3 423 aa14.74□□□□□ -0.05
CCDC40-213ENST00000574933 A0A1W2PRM7 423 aa14.74□□□□□ -0.05
CCDC40-213ENST00000574933 LY6LH3BQJ8 138 aa14.74□□□□□ -0.05
CCDC40-213ENST00000574933 BUB1B-PAK6H3BSN5 160 aa14.74□□□□□ -0.05
CCDC40-213ENST00000574933 HSPA12AO43301 675 aa14.74□□□□□ -0.05
CCDC40-213ENST00000574933 RBBP9O75884 186 aa14.74□□□□□ -0.05
CCDC40-213ENST00000574933 HTR1DP28221 377 aa14.74□□□□□ -0.05
CCDC40-213ENST00000574933 ZNF137PP52743 207 aa14.74□□□□□ -0.05
CCDC40-213ENST00000574933 ACTBP60709 375 aa14.74□□□□□ -0.05
CCDC40-213ENST00000574933 ACTG1P63261 375 aa14.74□□□□□ -0.05
CCDC40-213ENST00000574933 DGCR2P98153 550 aa14.74□□□□□ -0.05
CCDC40-213ENST00000574933 ZNF79Q15937 498 aa14.74□□□□□ -0.05
CCDC40-213ENST00000574933 LYSMD2Q8IV50 215 aa14.74□□□□□ -0.05
CCDC40-213ENST00000574933 H1FOOQ8IZA3 346 aaPredicted RBP14.74□□□□□ -0.05
CCDC40-213ENST00000574933 OR10J5Q8NHC4 309 aa14.74□□□□□ -0.05
CCDC40-213ENST00000574933 EDARADDQ8WWZ3 215 aa14.74□□□□□ -0.05
CCDC40-213ENST00000574933 MALSU1Q96EH3 234 aa14.74□□□□□ -0.05
CCDC40-213ENST00000574933 MEGF9Q9H1U4 602 aa14.74□□□□□ -0.05
CCDC40-213ENST00000574933 DPM3Q9P2X0 92 aa14.74□□□□□ -0.05
CCDC40-213ENST00000574933 AMMECR1Q9Y4X0 333 aaPredicted RBP14.74□□□□□ -0.05
CCDC40-213ENST00000574933 A0A0U1RQK1 487 aa14.73□□□□□ -0.05
CCDC40-213ENST00000574933 SLC31A2O15432 143 aa14.73□□□□□ -0.05
CCDC40-213ENST00000574933 IGHV3-7P01780 117 aa14.73□□□□□ -0.05
CCDC40-213ENST00000574933 CEACAM6P40199 344 aa14.73□□□□□ -0.05
CCDC40-213ENST00000574933 GNG10P50151 68 aa14.73□□□□□ -0.05
CCDC40-213ENST00000574933 TAS2R46P59540 309 aa14.73□□□□□ -0.05
CCDC40-213ENST00000574933 LHFPL4Q7Z7J7 247 aa14.73□□□□□ -0.05
CCDC40-213ENST00000574933 AGMATQ9BSE5 352 aa14.73□□□□□ -0.05
CCDC40-213ENST00000574933 ABHD14AQ9BUJ0 271 aa14.73□□□□□ -0.05
CCDC40-213ENST00000574933 RDH8Q9NYR8 311 aa14.73□□□□□ -0.05
CCDC40-213ENST00000574933 KLK11Q9UBX7 282 aa14.73□□□□□ -0.05
CCDC40-213ENST00000574933 SOX21Q9Y651 276 aaPredicted RBP14.73□□□□□ -0.05
CCDC40-213ENST00000574933 LEUTXA8MZ59 168 aa14.72□□□□□ -0.05
CCDC40-213ENST00000574933 OOSP1A8MZH6 123 aa14.72□□□□□ -0.05
CCDC40-213ENST00000574933 BET1O15155 118 aa14.72□□□□□ -0.05
CCDC40-213ENST00000574933 TUSC2O75896 110 aa14.72□□□□□ -0.05
CCDC40-213ENST00000574933 FBP1P09467 338 aa14.72□□□□□ -0.05
CCDC40-213ENST00000574933 CEACAM3P40198 252 aa14.72□□□□□ -0.05
CCDC40-213ENST00000574933 RAB7AP51149 207 aa14.72□□□□□ -0.05
CCDC40-213ENST00000574933 ARPC4P59998 168 aa14.72□□□□□ -0.05
CCDC40-213ENST00000574933 CDK10Q15131 360 aa14.72□□□□□ -0.05
CCDC40-213ENST00000574933 OVCH2Q7RTZ1 564 aa14.72□□□□□ -0.05
CCDC40-213ENST00000574933 LDLRAD3Q86YD5 345 aa14.72□□□□□ -0.05
CCDC40-213ENST00000574933 OR2AK2Q8NG84 335 aa14.72□□□□□ -0.05
CCDC40-213ENST00000574933 C17orf50Q8WW18 174 aa14.72□□□□□ -0.05
CCDC40-213ENST00000574933 ST6GALNAC6Q969X2 333 aa14.72□□□□□ -0.05
CCDC40-213ENST00000574933 ZNF48Q96MX3 618 aaPredicted RBP14.72□□□□□ -0.05
CCDC40-213ENST00000574933 PARP12Q9H0J9 701 aaKnown RBP14.72□□□□□ -0.05
CCDC40-213ENST00000574933 C11orf54Q9H0W9 315 aaPredicted RBP14.72□□□□□ -0.05
CCDC40-213ENST00000574933 IFI27L2Q9H2X8 130 aa14.72□□□□□ -0.05
CCDC40-213ENST00000574933 GHITMQ9H3K2 345 aa14.72□□□□□ -0.05
CCDC40-213ENST00000574933 NECAP2Q9NVZ3 263 aa14.72□□□□□ -0.05
CCDC40-213ENST00000574933 ZNRD1Q9P1U0 126 aa14.72□□□□□ -0.05
CCDC40-213ENST00000574933 A0A1W2PPE3 182 aa14.71□□□□□ -0.05
CCDC40-213ENST00000574933 TBPP20226 339 aa14.71□□□□□ -0.05
CCDC40-213ENST00000574933 ZNF45Q02386 682 aa14.71□□□□□ -0.05
CCDC40-213ENST00000574933 AANATQ16613 207 aa14.71□□□□□ -0.05
CCDC40-213ENST00000574933 DEFB112Q30KQ8 113 aa14.71□□□□□ -0.05
CCDC40-213ENST00000574933 ODF3L1Q8IXM7 274 aa14.71□□□□□ -0.05
CCDC40-213ENST00000574933 MFSD4AQ8N468 514 aa14.71□□□□□ -0.05
CCDC40-213ENST00000574933 OR10X1Q8NGY0 326 aa14.71□□□□□ -0.05
CCDC40-213ENST00000574933 C22orf15Q8WYQ4 148 aa14.71□□□□□ -0.05
CCDC40-213ENST00000574933 SLC6A7Q99884 636 aa14.71□□□□□ -0.05
CCDC40-213ENST00000574933 GINS4Q9BRT9 223 aa14.71□□□□□ -0.05
CCDC40-213ENST00000574933 SRRQ9GZT4 340 aa14.71□□□□□ -0.05
CCDC40-213ENST00000574933 AKIP1Q9NQ31 210 aa14.71□□□□□ -0.05
CCDC40-213ENST00000574933 FAM96BQ9Y3D0 163 aa14.71□□□□□ -0.05
CCDC40-213ENST00000574933 VGLL3A8MV65 326 aa14.7□□□□□ -0.06
CCDC40-213ENST00000574933 CD74P04233 296 aa14.7□□□□□ -0.06
CCDC40-213ENST00000574933 OR5H8P0DN80 308 aa14.7□□□□□ -0.06
CCDC40-213ENST00000574933 IL3RAP26951 378 aa14.7□□□□□ -0.06
CCDC40-213ENST00000574933 ZNF816Q0VGE8 651 aaPredicted RBP14.7□□□□□ -0.06
CCDC40-213ENST00000574933 DYRK1AQ13627 763 aa14.7□□□□□ -0.06
CCDC40-213ENST00000574933 ACTBL2Q562R1 376 aa14.7□□□□□ -0.06
CCDC40-213ENST00000574933 TPTE2P1Q5T6R2 138 aa14.7□□□□□ -0.06
CCDC40-213ENST00000574933 ZNF660Q6AZW8 331 aaPredicted RBP14.7□□□□□ -0.06
CCDC40-213ENST00000574933 DHRS11Q6UWP2 260 aa14.7□□□□□ -0.06
CCDC40-213ENST00000574933 Q6YL49 198 aa14.7□□□□□ -0.06
CCDC40-213ENST00000574933 DYNAPQ8N1N2 210 aa14.7□□□□□ -0.06
CCDC40-213ENST00000574933 GDPD1Q8N9F7 314 aa14.7□□□□□ -0.06
CCDC40-213ENST00000574933 TMEM229BQ8NBD8 167 aa14.7□□□□□ -0.06
CCDC40-213ENST00000574933 GIMAP1Q8WWP7 306 aa14.7□□□□□ -0.06
CCDC40-213ENST00000574933 TAS2R8Q9NYW2 309 aa14.7□□□□□ -0.06
CCDC40-213ENST00000574933 GAB2Q9UQC2 676 aa14.7□□□□□ -0.06
CCDC40-213ENST00000574933 OR2W1Q9Y3N9 320 aa14.7□□□□□ -0.06
CCDC40-213ENST00000574933 C2CD3Q4AC94 2353 aa14.69□□□□□ -0.06
CCDC40-213ENST00000574933 FCER2P06734 321 aa14.69□□□□□ -0.06
CCDC40-213ENST00000574933 HLA-DMAP28067 261 aa14.69□□□□□ -0.06
CCDC40-213ENST00000574933 HRH1P35367 487 aa14.69□□□□□ -0.06
CCDC40-213ENST00000574933 DYNLT3P51808 116 aa14.69□□□□□ -0.06
CCDC40-213ENST00000574933 PYDC2Q56P42 97 aa14.69□□□□□ -0.06
CCDC40-213ENST00000574933 RNASE12Q5GAN4 147 aaKnown RBP14.69□□□□□ -0.06
CCDC40-213ENST00000574933 VAX1Q5SQQ9 334 aa14.69□□□□□ -0.06
CCDC40-213ENST00000574933 FAM71F2Q6NXP2 309 aa14.69□□□□□ -0.06
CCDC40-213ENST00000574933 OR5H2Q8NGV7 314 aa14.69□□□□□ -0.06
CCDC40-213ENST00000574933 TRIM63Q969Q1 353 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms