RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 CRYGSP22914 178 aa12.27□□□□□ -0.44
SMG6-215ENST00000574501 LCN2P80188 198 aa12.27□□□□□ -0.44
SMG6-215ENST00000574501 PRAMEF20Q5VT98 475 aa12.27□□□□□ -0.44
SMG6-215ENST00000574501 NUFIP2Q7Z417 695 aaKnown RBP12.27□□□□□ -0.44
SMG6-215ENST00000574501 MRPL52Q86TS9 123 aaKnown RBP12.27□□□□□ -0.44
SMG6-215ENST00000574501 TMEM54Q969K7 222 aa12.27□□□□□ -0.44
SMG6-215ENST00000574501 IMMP2LQ96T52 175 aa12.27□□□□□ -0.44
SMG6-215ENST00000574501 ULBP2Q9BZM5 246 aa12.27□□□□□ -0.44
SMG6-215ENST00000574501 TNRC18O15417 2968 aaPredicted RBP12.27□□□□□ -0.45
SMG6-215ENST00000574501 NPIPA2E9PIF3 369 aa12.27□□□□□ -0.45
SMG6-215ENST00000574501 NPIPA3F8WFD2 350 aa12.27□□□□□ -0.45
SMG6-215ENST00000574501 C1QTNF9P0C862 333 aa12.27□□□□□ -0.45
SMG6-215ENST00000574501 BCL3P20749 454 aa12.27□□□□□ -0.45
SMG6-215ENST00000574501 CHRNB4P30926 498 aa12.27□□□□□ -0.45
SMG6-215ENST00000574501 MPLP40238 635 aa12.27□□□□□ -0.45
SMG6-215ENST00000574501 OR1D5P58170 312 aa12.27□□□□□ -0.45
SMG6-215ENST00000574501 MMDQ15546 238 aa12.27□□□□□ -0.45
SMG6-215ENST00000574501 COL5A1-AS1Q5SY13 56 aa12.27□□□□□ -0.45
SMG6-215ENST00000574501 FBXW9Q5XUX1 488 aa12.27□□□□□ -0.45
SMG6-215ENST00000574501 DEFB119Q8N690 84 aa12.27□□□□□ -0.45
SMG6-215ENST00000574501 OR2M3Q8NG83 312 aa12.27□□□□□ -0.45
SMG6-215ENST00000574501 MSL2Q9HCI7 577 aa12.27□□□□□ -0.45
SMG6-215ENST00000574501 IL36GQ9NZH8 169 aa12.27□□□□□ -0.45
SMG6-215ENST00000574501 TP53TG3Q9ULZ0 132 aa12.27□□□□□ -0.45
SMG6-215ENST00000574501 ZFP30Q9Y2G7 519 aa12.27□□□□□ -0.45
SMG6-215ENST00000574501 DIDO1Q9BTC0 2240 aaKnown RBP12.26□□□□□ -0.45
SMG6-215ENST00000574501 LILRA5A6NI73 299 aa12.26□□□□□ -0.45
SMG6-215ENST00000574501 ZNHIT1O43257 154 aa12.26□□□□□ -0.45
SMG6-215ENST00000574501 SYNGR3O43761 229 aa12.26□□□□□ -0.45
SMG6-215ENST00000574501 RPP30P78346 268 aaKnown RBP12.26□□□□□ -0.45
SMG6-215ENST00000574501 SLC38A11Q08AI6 406 aa12.26□□□□□ -0.45
SMG6-215ENST00000574501 TMEM42Q69YG0 159 aa12.26□□□□□ -0.45
SMG6-215ENST00000574501 OR10G9Q8NGN4 311 aa12.26□□□□□ -0.45
SMG6-215ENST00000574501 OR10G7Q8NGN6 311 aa12.26□□□□□ -0.45
SMG6-215ENST00000574501 RNASE8Q8TDE3 154 aaKnown RBP12.26□□□□□ -0.45
SMG6-215ENST00000574501 NEIL1Q96FI4 390 aaPredicted RBP12.26□□□□□ -0.45
SMG6-215ENST00000574501 TMEM9BQ9NQ34 198 aa12.26□□□□□ -0.45
SMG6-215ENST00000574501 MYO9BQ13459 2157 aa12.26□□□□□ -0.45
SMG6-215ENST00000574501 A0A1B0GX78 115 aa12.26□□□□□ -0.45
SMG6-215ENST00000574501 C5orf67F2Z3F1 127 aa12.26□□□□□ -0.45
SMG6-215ENST00000574501 ZNF16P17020 682 aaPredicted RBP12.26□□□□□ -0.45
SMG6-215ENST00000574501 CD38P28907 300 aa12.26□□□□□ -0.45
SMG6-215ENST00000574501 SOX8P57073 446 aa12.26□□□□□ -0.45
SMG6-215ENST00000574501 LINC00310P59036 64 aa12.26□□□□□ -0.45
SMG6-215ENST00000574501 RPS16P62249 146 aaKnown RBP12.26□□□□□ -0.45
SMG6-215ENST00000574501 PRDX4Q13162 271 aa12.26□□□□□ -0.45
SMG6-215ENST00000574501 LINC01551Q86U37 167 aa12.26□□□□□ -0.45
SMG6-215ENST00000574501 NFAM1Q8NET5 270 aaPredicted RBP12.26□□□□□ -0.45
SMG6-215ENST00000574501 SGMS2Q8NHU3 365 aa12.26□□□□□ -0.45
SMG6-215ENST00000574501 DERL1Q9BUN8 251 aa12.26□□□□□ -0.45
SMG6-215ENST00000574501 OR51B6Q9H340 312 aa12.26□□□□□ -0.45
SMG6-215ENST00000574501 ERRFI1Q9UJM3 462 aaPredicted RBP12.26□□□□□ -0.45
SMG6-215ENST00000574501 ZNF816-ZNF321PA0A0X1KG74 233 aa12.25□□□□□ -0.45
SMG6-215ENST00000574501 C11orf94C9JXX5 98 aa12.25□□□□□ -0.45
SMG6-215ENST00000574501 NAPSAO96009 420 aa12.25□□□□□ -0.45
SMG6-215ENST00000574501 IGKV1-5P01602 117 aa12.25□□□□□ -0.45
SMG6-215ENST00000574501 SPINK2P20155 84 aa12.25□□□□□ -0.45
SMG6-215ENST00000574501 TPPP2P59282 170 aa12.25□□□□□ -0.45
SMG6-215ENST00000574501 UBE2NP61088 152 aaKnown RBP12.25□□□□□ -0.45
SMG6-215ENST00000574501 C20orf204Q6ZNR8 217 aa12.25□□□□□ -0.45
SMG6-215ENST00000574501 TMEM144Q7Z5S9 345 aa12.25□□□□□ -0.45
SMG6-215ENST00000574501 ANKRD37Q7Z713 158 aa12.25□□□□□ -0.45
SMG6-215ENST00000574501 ZNF114Q8NC26 417 aa12.25□□□□□ -0.45
SMG6-215ENST00000574501 OR1F12Q8NHA8 337 aa12.25□□□□□ -0.45
SMG6-215ENST00000574501 ZDHHC11Q9H8X9 412 aa12.25□□□□□ -0.45
SMG6-215ENST00000574501 RYDENQ9NUL5 291 aaKnown RBP12.25□□□□□ -0.45
SMG6-215ENST00000574501 PRUNE2Q8WUY3 3088 aa12.25□□□□□ -0.45
SMG6-215ENST00000574501 CTXND1A0A1B0GTU2 59 aa12.25□□□□□ -0.45
SMG6-215ENST00000574501 C3orf80F5H4A9 247 aa12.25□□□□□ -0.45
SMG6-215ENST00000574501 SERF1AO75920 110 aa12.25□□□□□ -0.45
SMG6-215ENST00000574501 PIAS2O75928 621 aa12.25□□□□□ -0.45
SMG6-215ENST00000574501 WNT2P09544 360 aa12.25□□□□□ -0.45
SMG6-215ENST00000574501 HNF1AP20823 631 aa12.25□□□□□ -0.45
SMG6-215ENST00000574501 UBE2G2P60604 165 aa12.25□□□□□ -0.45
SMG6-215ENST00000574501 KIAA0895LQ68EN5 471 aa12.25□□□□□ -0.45
SMG6-215ENST00000574501 CIB3Q96Q77 187 aaPredicted RBP12.25□□□□□ -0.45
SMG6-215ENST00000574501 UBE2ZQ9H832 354 aaPredicted RBP12.25□□□□□ -0.45
SMG6-215ENST00000574501 GPR27Q9NS67 375 aa12.25□□□□□ -0.45
SMG6-215ENST00000574501 ELOVL5Q9NYP7 299 aa12.25□□□□□ -0.45
SMG6-215ENST00000574501 LOC102725191A0A1B0GVB3 256 aa12.24□□□□□ -0.45
SMG6-215ENST00000574501 F2Z2F3 143 aa12.24□□□□□ -0.45
SMG6-215ENST00000574501 MLNRO43193 412 aa12.24□□□□□ -0.45
SMG6-215ENST00000574501 VENTXO95231 258 aa12.24□□□□□ -0.45
SMG6-215ENST00000574501 RHBDD2Q6NTF9 364 aa12.24□□□□□ -0.45
SMG6-215ENST00000574501 PCSK4Q6UW60 755 aa12.24□□□□□ -0.45
SMG6-215ENST00000574501 FOXL2NBQ6ZUU3 175 aa12.24□□□□□ -0.45
SMG6-215ENST00000574501 IL1F10Q8WWZ1 152 aa12.24□□□□□ -0.45
SMG6-215ENST00000574501 SLC35E1Q96K37 410 aa12.24□□□□□ -0.45
SMG6-215ENST00000574501 PPP1R3CQ9UQK1 317 aa12.24□□□□□ -0.45
SMG6-215ENST00000574501 EML6Q6ZMW3 1958 aa12.24□□□□□ -0.45
SMG6-215ENST00000574501 FRYQ5TBA9 3013 aa12.24□□□□□ -0.45
SMG6-215ENST00000574501 B4GALT1P15291 398 aa12.23□□□□□ -0.45
SMG6-215ENST00000574501 ZNF32P17041 273 aa12.23□□□□□ -0.45
SMG6-215ENST00000574501 CBLN1P23435 193 aa12.23□□□□□ -0.45
SMG6-215ENST00000574501 S100GP29377 79 aa12.23□□□□□ -0.45
SMG6-215ENST00000574501 CFHR1Q03591 330 aa12.23□□□□□ -0.45
SMG6-215ENST00000574501 FFAR4Q5NUL3 377 aa12.23□□□□□ -0.45
SMG6-215ENST00000574501 FAM27BQ5VT28 67 aa12.23□□□□□ -0.45
SMG6-215ENST00000574501 Q6ZS49 121 aa12.23□□□□□ -0.45
SMG6-215ENST00000574501 RLN3Q8WXF3 142 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 130.6 ms