RNA–Protein interactions for RNA: ENST00000574087.1

NUP88-208, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-208ENST00000574087 TMEM61Q8N0U2 210 aa2.86□□□□□ -1.95
NUP88-208ENST00000574087 EID2Q8N6I1 236 aa2.86□□□□□ -1.95
NUP88-208ENST00000574087 GATD1Q8NB37 220 aa2.86□□□□□ -1.95
NUP88-208ENST00000574087 UBAC2Q8NBM4 344 aa2.86□□□□□ -1.95
NUP88-208ENST00000574087 CHST4Q8NCG5 386 aa2.86□□□□□ -1.95
NUP88-208ENST00000574087 SLC30A7Q8NEW0 376 aa2.86□□□□□ -1.95
NUP88-208ENST00000574087 OR4D11Q8NGI4 311 aa2.86□□□□□ -1.95
NUP88-208ENST00000574087 OR4C13Q8NGP0 309 aa2.86□□□□□ -1.95
NUP88-208ENST00000574087 ZNRF2Q8NHG8 242 aa2.86□□□□□ -1.95
NUP88-208ENST00000574087 PIFOQ8TCI5 191 aa2.86□□□□□ -1.95
NUP88-208ENST00000574087 SLC7A13Q8TCU3 470 aa2.86□□□□□ -1.95
NUP88-208ENST00000574087 ORAOV1Q8WV07 137 aa2.86□□□□□ -1.95
NUP88-208ENST00000574087 DCAKDQ8WVC6 231 aa2.86□□□□□ -1.95
NUP88-208ENST00000574087 C10orf82Q8WW14 230 aa2.86□□□□□ -1.95
NUP88-208ENST00000574087 TMEM158Q8WZ71 300 aa2.86□□□□□ -1.95
NUP88-208ENST00000574087 ISOC1Q96CN7 298 aa2.86□□□□□ -1.95
NUP88-208ENST00000574087 CMBLQ96DG6 245 aa2.86□□□□□ -1.95
NUP88-208ENST00000574087 DCUN1D1Q96GG9 259 aa2.86□□□□□ -1.95
NUP88-208ENST00000574087 CNBD2Q96M20 576 aa2.86□□□□□ -1.95
NUP88-208ENST00000574087 COL21A1Q96P44 957 aa2.86□□□□□ -1.95
NUP88-208ENST00000574087 TAPBPLQ9BX59 468 aa2.86□□□□□ -1.95
NUP88-208ENST00000574087 SLC17A9Q9BYT1 436 aa2.86□□□□□ -1.95
NUP88-208ENST00000574087 DEFB127Q9H1M4 99 aa2.86□□□□□ -1.95
NUP88-208ENST00000574087 ABCG5Q9H222 651 aa2.86□□□□□ -1.95
NUP88-208ENST00000574087 RBKSQ9H477 322 aa2.86□□□□□ -1.95
NUP88-208ENST00000574087 PRORYQ9H606 182 aa2.86□□□□□ -1.95
NUP88-208ENST00000574087 LHX9Q9NQ69 397 aa2.86□□□□□ -1.95
NUP88-208ENST00000574087 TRAPPC4Q9Y296 219 aa2.86□□□□□ -1.95
NUP88-208ENST00000574087 HMGXB3Q12766 1538 aa2.86□□□□□ -1.95
NUP88-208ENST00000574087 TMEM131LA2VDJ0 1609 aa2.86□□□□□ -1.95
NUP88-208ENST00000574087 TMEM2Q9UHN6 1383 aa2.86□□□□□ -1.95
NUP88-208ENST00000574087 MYH1P12882 1939 aa2.85□□□□□ -1.95
NUP88-208ENST00000574087 MYH2Q9UKX2 1941 aa2.85□□□□□ -1.95
NUP88-208ENST00000574087 TROQ12816 1431 aaPredicted RBP2.85□□□□□ -1.95
NUP88-208ENST00000574087 TNS3Q68CZ2 1445 aa2.85□□□□□ -1.95
NUP88-208ENST00000574087 ATP7AQ04656 1500 aa2.85□□□□□ -1.95
NUP88-208ENST00000574087 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP2.85□□□□□ -1.95
NUP88-208ENST00000574087 MEIKINA0A087WXM9 373 aa2.85□□□□□ -1.95
NUP88-208ENST00000574087 ZNF816-ZNF321PA0A0X1KG74 233 aa2.85□□□□□ -1.95
NUP88-208ENST00000574087 A0A1W2PRE2 83 aa2.85□□□□□ -1.95
NUP88-208ENST00000574087 TRAPPC13A5PLN9 417 aa2.85□□□□□ -1.95
NUP88-208ENST00000574087 OR5H1A6NKK0 313 aa2.85□□□□□ -1.95
NUP88-208ENST00000574087 A8MWP6 167 aa2.85□□□□□ -1.95
NUP88-208ENST00000574087 F6UZH7 168 aa2.85□□□□□ -1.95
NUP88-208ENST00000574087 COPEO14579 308 aa2.85□□□□□ -1.95
NUP88-208ENST00000574087 MFSD11O43934 449 aa2.85□□□□□ -1.95
NUP88-208ENST00000574087 ATP5LO75964 103 aa2.85□□□□□ -1.95
NUP88-208ENST00000574087 OR7C1O76099 320 aaPredicted RBP2.85□□□□□ -1.95
NUP88-208ENST00000574087 ATG12O94817 140 aa2.85□□□□□ -1.95
NUP88-208ENST00000574087 CD8AP01732 235 aa2.85□□□□□ -1.95
NUP88-208ENST00000574087 OR13C7P0DN81 318 aa2.85□□□□□ -1.95
NUP88-208ENST00000574087 ESDP10768 282 aa2.85□□□□□ -1.95
NUP88-208ENST00000574087 CD79AP11912 226 aa2.85□□□□□ -1.95
NUP88-208ENST00000574087 GRPRP30550 384 aa2.85□□□□□ -1.95
NUP88-208ENST00000574087 AQP4P55087 323 aa2.85□□□□□ -1.95
NUP88-208ENST00000574087 PIGPP57054 158 aa2.85□□□□□ -1.95
NUP88-208ENST00000574087 DEFA1P59665 94 aa2.85□□□□□ -1.95
NUP88-208ENST00000574087 DEFA3P59666 94 aa2.85□□□□□ -1.95
NUP88-208ENST00000574087 RUNX1Q01196 453 aa2.85□□□□□ -1.95
NUP88-208ENST00000574087 FMODQ06828 376 aa2.85□□□□□ -1.95
NUP88-208ENST00000574087 SNRNP35Q16560 246 aaKnown RBP2.85□□□□□ -1.95
NUP88-208ENST00000574087 GUCA2BQ16661 112 aa2.85□□□□□ -1.95
NUP88-208ENST00000574087 FAM162BQ5T6X4 162 aa2.85□□□□□ -1.95
NUP88-208ENST00000574087 TSPO2Q5TGU0 170 aa2.85□□□□□ -1.95
NUP88-208ENST00000574087 OPN5Q6U736 354 aa2.85□□□□□ -1.95
NUP88-208ENST00000574087 Q6ZN92 141 aa2.85□□□□□ -1.95
NUP88-208ENST00000574087 ZNF620Q6ZNG0 422 aa2.85□□□□□ -1.95
NUP88-208ENST00000574087 PDZD9Q8IXQ8 264 aa2.85□□□□□ -1.95
NUP88-208ENST00000574087 C8orf59Q8N0T1 100 aaPredicted RBP2.85□□□□□ -1.95
NUP88-208ENST00000574087 TMEM86BQ8N661 226 aa2.85□□□□□ -1.95
NUP88-208ENST00000574087 TPRX1Q8N7U7 411 aa2.85□□□□□ -1.95
NUP88-208ENST00000574087 OR1S2Q8NGQ3 325 aa2.85□□□□□ -1.95
NUP88-208ENST00000574087 OR5B3Q8NH48 314 aa2.85□□□□□ -1.95
NUP88-208ENST00000574087 OR4C6Q8NH72 309 aa2.85□□□□□ -1.95
NUP88-208ENST00000574087 OR13C6PQ8NH95 151 aa2.85□□□□□ -1.95
NUP88-208ENST00000574087 TERB2Q8NHR7 220 aa2.85□□□□□ -1.95
NUP88-208ENST00000574087 STARD4Q96DR4 205 aa2.85□□□□□ -1.95
NUP88-208ENST00000574087 ADTRPQ96IZ2 230 aa2.85□□□□□ -1.95
NUP88-208ENST00000574087 BTF3L4Q96K17 158 aa2.85□□□□□ -1.95
NUP88-208ENST00000574087 OXGR1Q96P68 337 aa2.85□□□□□ -1.95
NUP88-208ENST00000574087 GABRG3Q99928 467 aa2.85□□□□□ -1.95
NUP88-208ENST00000574087 MARVELD1Q9BSK0 173 aa2.85□□□□□ -1.95
NUP88-208ENST00000574087 THTPAQ9BU02 230 aa2.85□□□□□ -1.95
NUP88-208ENST00000574087 RNF167Q9H6Y7 350 aa2.85□□□□□ -1.95
NUP88-208ENST00000574087 EFCAB1Q9HAE3 211 aa2.85□□□□□ -1.95
NUP88-208ENST00000574087 CXorf21Q9HAI6 301 aa2.85□□□□□ -1.95
NUP88-208ENST00000574087 TMEM38BQ9NVV0 291 aa2.85□□□□□ -1.95
NUP88-208ENST00000574087 MED9Q9NWA0 146 aa2.85□□□□□ -1.95
NUP88-208ENST00000574087 LSM7Q9UK45 103 aaKnown RBP2.85□□□□□ -1.95
NUP88-208ENST00000574087 GLI2P10070 1586 aa2.85□□□□□ -1.95
NUP88-208ENST00000574087 CACNA1SQ13698 1873 aa2.85□□□□□ -1.95
NUP88-208ENST00000574087 ABCA6Q8N139 1617 aa2.85□□□□□ -1.95
NUP88-208ENST00000574087 COL22A1Q8NFW1 1626 aaPredicted RBP2.85□□□□□ -1.95
NUP88-208ENST00000574087 CC2D2AQ9P2K1 1620 aa2.85□□□□□ -1.95
NUP88-208ENST00000574087 MYH8P13535 1937 aa2.85□□□□□ -1.95
NUP88-208ENST00000574087 ZNFX1Q9P2E3 1918 aaKnown RBP2.85□□□□□ -1.95
NUP88-208ENST00000574087 CUL7Q14999 1698 aa2.85□□□□□ -1.95
NUP88-208ENST00000574087 MLH3Q9UHC1 1453 aa2.84□□□□□ -1.95
NUP88-208ENST00000574087 MYH11P35749 1972 aa2.84□□□□□ -1.95
NUP88-208ENST00000574087 ADCY10Q96PN6 1610 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms