RNA–Protein interactions for RNA: ENST00000573474.5

CCDC40-209, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 554 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-209ENST00000573474 FAM53AQ6NSI3 398 aaPredicted RBP11.26□□□□□ -0.61
CCDC40-209ENST00000573474 LYG2Q86SG7 212 aa11.26□□□□□ -0.61
CCDC40-209ENST00000573474 LDLRAD3Q86YD5 345 aa11.26□□□□□ -0.61
CCDC40-209ENST00000573474 CMTM1Q8IZ96 169 aa11.26□□□□□ -0.61
CCDC40-209ENST00000573474 LRRC75A-AS1Q8N1F1 130 aa11.26□□□□□ -0.61
CCDC40-209ENST00000573474 OR52B4Q8NGK2 314 aa11.26□□□□□ -0.61
CCDC40-209ENST00000573474 OR8U1Q8NH10 309 aa11.26□□□□□ -0.61
CCDC40-209ENST00000573474 AKR1E2Q96JD6 320 aa11.26□□□□□ -0.61
CCDC40-209ENST00000573474 MED28Q9H204 178 aa11.26□□□□□ -0.61
CCDC40-209ENST00000573474 CCL28Q9NRJ3 127 aa11.26□□□□□ -0.61
CCDC40-209ENST00000573474 DOPEY2Q9Y3R5 2298 aa11.26□□□□□ -0.61
CCDC40-209ENST00000573474 TEX13DA0A0J9YY54 714 aaPredicted RBP11.25□□□□□ -0.61
CCDC40-209ENST00000573474 CRYM-AS1A6NIL9 109 aa11.25□□□□□ -0.61
CCDC40-209ENST00000573474 C17orf98A8MV24 154 aa11.25□□□□□ -0.61
CCDC40-209ENST00000573474 C22orf46C9J442 243 aa11.25□□□□□ -0.61
CCDC40-209ENST00000573474 SSNA1O43805 119 aa11.25□□□□□ -0.61
CCDC40-209ENST00000573474 PFDN1O60925 122 aa11.25□□□□□ -0.61
CCDC40-209ENST00000573474 MMP23AO75900 390 aa11.25□□□□□ -0.61
CCDC40-209ENST00000573474 SFT2D2O95562 160 aa11.25□□□□□ -0.61
CCDC40-209ENST00000573474 HLA-AP01891 365 aaKnown RBP11.25□□□□□ -0.61
CCDC40-209ENST00000573474 RBP4P02753 201 aa11.25□□□□□ -0.61
CCDC40-209ENST00000573474 LIPFP07098 398 aa11.25□□□□□ -0.61
CCDC40-209ENST00000573474 TRAPPC2P0DI81 140 aa11.25□□□□□ -0.61
CCDC40-209ENST00000573474 TRAPPC2BP0DI82 140 aa11.25□□□□□ -0.61
CCDC40-209ENST00000573474 VAMP1P23763 118 aa11.25□□□□□ -0.61
CCDC40-209ENST00000573474 RRAS2P62070 204 aaPredicted RBP11.25□□□□□ -0.61
CCDC40-209ENST00000573474 DEFB113Q30KQ7 82 aa11.25□□□□□ -0.61
CCDC40-209ENST00000573474 PHLDA2Q53GA4 152 aa11.25□□□□□ -0.61
CCDC40-209ENST00000573474 ZNF818PQ6ZRF7 136 aa11.25□□□□□ -0.61
CCDC40-209ENST00000573474 SGPP2Q8IWX5 399 aa11.25□□□□□ -0.61
CCDC40-209ENST00000573474 ZBTB34Q8NCN2 500 aa11.25□□□□□ -0.61
CCDC40-209ENST00000573474 BVESQ8NE79 360 aa11.25□□□□□ -0.61
CCDC40-209ENST00000573474 OR2AK2Q8NG84 335 aa11.25□□□□□ -0.61
CCDC40-209ENST00000573474 RTN4IP1Q8WWV3 396 aaPredicted RBP11.25□□□□□ -0.61
CCDC40-209ENST00000573474 MBD6Q96DN6 1003 aa11.25□□□□□ -0.61
CCDC40-209ENST00000573474 DMRTB1Q96MA1 342 aa11.25□□□□□ -0.61
CCDC40-209ENST00000573474 SLC2A9Q9NRM0 540 aa11.25□□□□□ -0.61
CCDC40-209ENST00000573474 KCNS2Q9ULS6 477 aa11.25□□□□□ -0.61
CCDC40-209ENST00000573474 IGHV4-30-2A0A087WSY4 118 aa11.24□□□□□ -0.61
CCDC40-209ENST00000573474 hCG_1809904A0A1W2PP81 198 aa11.24□□□□□ -0.61
CCDC40-209ENST00000573474 A0A1W2PPE2 198 aa11.24□□□□□ -0.61
CCDC40-209ENST00000573474 A0A1W2PR64 198 aa11.24□□□□□ -0.61
CCDC40-209ENST00000573474 A0A1W2PRV1 198 aa11.24□□□□□ -0.61
CCDC40-209ENST00000573474 KIAA1324LA8MWY0 1029 aaPredicted RBP11.24□□□□□ -0.61
CCDC40-209ENST00000573474 MPPED1O15442 326 aa11.24□□□□□ -0.61
CCDC40-209ENST00000573474 RAB7AP51149 207 aa11.24□□□□□ -0.61
CCDC40-209ENST00000573474 CLEC12BQ2HXU8 276 aa11.24□□□□□ -0.61
CCDC40-209ENST00000573474 Q3ZCU0 254 aa11.24□□□□□ -0.61
CCDC40-209ENST00000573474 C12orf45Q8N5I9 185 aaPredicted RBP11.24□□□□□ -0.61
CCDC40-209ENST00000573474 ZNF645Q8N7E2 425 aa11.24□□□□□ -0.61
CCDC40-209ENST00000573474 NAA60Q9H7X0 242 aa11.24□□□□□ -0.61
CCDC40-209ENST00000573474 RNF150Q9ULK6 438 aa11.24□□□□□ -0.61
CCDC40-209ENST00000573474 PSG11Q9UQ72 335 aa11.24□□□□□ -0.61
CCDC40-209ENST00000573474 KCNIP3Q9Y2W7 256 aa11.24□□□□□ -0.61
CCDC40-209ENST00000573474 DSCAML1Q8TD84 2053 aa11.24□□□□□ -0.61
CCDC40-209ENST00000573474 CRYBG3Q68DQ2 2970 aa11.24□□□□□ -0.61
CCDC40-209ENST00000573474 SPG11Q96JI7 2443 aa11.24□□□□□ -0.61
CCDC40-209ENST00000573474 TACC2O95359 2948 aa11.23□□□□□ -0.61
CCDC40-209ENST00000573474 A8MXK9 166 aa11.23□□□□□ -0.61
CCDC40-209ENST00000573474 ST8SIA5O15466 376 aa11.23□□□□□ -0.61
CCDC40-209ENST00000573474 FOXH1O75593 365 aa11.23□□□□□ -0.61
CCDC40-209ENST00000573474 PGLYRP1O75594 196 aaPredicted RBP11.23□□□□□ -0.61
CCDC40-209ENST00000573474 DUS4LO95620 317 aaKnown RBP11.23□□□□□ -0.61
CCDC40-209ENST00000573474 IFNA2P01563 188 aa11.23□□□□□ -0.61
CCDC40-209ENST00000573474 IGLV2-14P01704 120 aa11.23□□□□□ -0.61
CCDC40-209ENST00000573474 IGHV1-8P0DP01 117 aa11.23□□□□□ -0.61
CCDC40-209ENST00000573474 ANXA3P12429 323 aa11.23□□□□□ -0.61
CCDC40-209ENST00000573474 SLC25A16P16260 332 aa11.23□□□□□ -0.61
CCDC40-209ENST00000573474 ZFP36P26651 326 aaKnown RBP11.23□□□□□ -0.61
CCDC40-209ENST00000573474 CD34P28906 385 aa11.23□□□□□ -0.61
CCDC40-209ENST00000573474 ZNF134P52741 427 aa11.23□□□□□ -0.61
CCDC40-209ENST00000573474 ERVFRD-1P60508 538 aa11.23□□□□□ -0.61
CCDC40-209ENST00000573474 SUPT4H1P63272 117 aaKnown RBP11.23□□□□□ -0.61
CCDC40-209ENST00000573474 KCTD9Q7L273 389 aa11.23□□□□□ -0.61
CCDC40-209ENST00000573474 C11orf42Q8N5U0 333 aa11.23□□□□□ -0.61
CCDC40-209ENST00000573474 ZNF439Q8NDP4 499 aa11.23□□□□□ -0.61
CCDC40-209ENST00000573474 CASTOR1Q8WTX7 329 aa11.23□□□□□ -0.61
CCDC40-209ENST00000573474 MITD1Q8WV92 249 aa11.23□□□□□ -0.61
CCDC40-209ENST00000573474 LEAP2Q969E1 77 aa11.23□□□□□ -0.61
CCDC40-209ENST00000573474 GALNT14Q96FL9 552 aa11.23□□□□□ -0.61
CCDC40-209ENST00000573474 PHB2Q99623 299 aa11.23□□□□□ -0.61
CCDC40-209ENST00000573474 AGMATQ9BSE5 352 aa11.23□□□□□ -0.61
CCDC40-209ENST00000573474 ABHD14AQ9BUJ0 271 aa11.23□□□□□ -0.61
CCDC40-209ENST00000573474 SUCNR1Q9BXA5 334 aa11.23□□□□□ -0.61
CCDC40-209ENST00000573474 OR2D2Q9H210 308 aa11.23□□□□□ -0.61
CCDC40-209ENST00000573474 SESN1Q9Y6P5 492 aa11.23□□□□□ -0.61
CCDC40-209ENST00000573474 GCN1Q92616 2671 aaKnown RBP11.23□□□□□ -0.61
CCDC40-209ENST00000573474 MALRD1Q5VYJ5 2156 aa11.23□□□□□ -0.61
CCDC40-209ENST00000573474 FBN2P35556 2912 aa11.22□□□□□ -0.61
CCDC40-209ENST00000573474 A0A087X0M5 115 aa11.22□□□□□ -0.61
CCDC40-209ENST00000573474 A0A0B4J2A0 478 aa11.22□□□□□ -0.61
CCDC40-209ENST00000573474 IGHV4-61A0A0C4DH41 118 aa11.22□□□□□ -0.61
CCDC40-209ENST00000573474 A0A1B0GX30 115 aa11.22□□□□□ -0.61
CCDC40-209ENST00000573474 M0R1W7 72 aa11.22□□□□□ -0.61
CCDC40-209ENST00000573474 ENSAO43768 121 aaKnown RBP11.22□□□□□ -0.61
CCDC40-209ENST00000573474 IGHV3-7P01780 117 aa11.22□□□□□ -0.61
CCDC40-209ENST00000573474 GPR12P47775 334 aa11.22□□□□□ -0.61
CCDC40-209ENST00000573474 FCN2Q15485 313 aa11.22□□□□□ -0.61
CCDC40-209ENST00000573474 SLC9A3R2Q15599 337 aa11.22□□□□□ -0.61
CCDC40-209ENST00000573474 CT45A1Q5HYN5 189 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms