RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 TCF23Q7RTU1 214 aa3.87□□□□□ -1.79
TOPBP1-210ENST00000572787 YTHDF3Q7Z739 585 aaKnown RBP3.87□□□□□ -1.79
TOPBP1-210ENST00000572787 ZNF589Q86UQ0 364 aaPredicted RBP3.87□□□□□ -1.79
TOPBP1-210ENST00000572787 PDZD9Q8IXQ8 264 aa3.87□□□□□ -1.79
TOPBP1-210ENST00000572787 LY6G5BQ8NDX9 201 aa3.87□□□□□ -1.79
TOPBP1-210ENST00000572787 ACOT12Q8WYK0 555 aa3.87□□□□□ -1.79
TOPBP1-210ENST00000572787 SLC7A6Q92536 515 aa3.87□□□□□ -1.79
TOPBP1-210ENST00000572787 FRZBQ92765 325 aa3.87□□□□□ -1.79
TOPBP1-210ENST00000572787 MRPL20Q9BYC9 149 aaKnown RBP3.87□□□□□ -1.79
TOPBP1-210ENST00000572787 KRTAP9-8Q9BYQ0 159 aa3.87□□□□□ -1.79
TOPBP1-210ENST00000572787 OCR1Q9BZK8 76 aa3.87□□□□□ -1.79
TOPBP1-210ENST00000572787 IFI27L2Q9H2X8 130 aa3.87□□□□□ -1.79
TOPBP1-210ENST00000572787 CDC42EP4Q9H3Q1 356 aaKnown RBP3.87□□□□□ -1.79
TOPBP1-210ENST00000572787 POPDC3Q9HBV1 291 aa3.87□□□□□ -1.79
TOPBP1-210ENST00000572787 NIT2Q9NQR4 276 aa3.87□□□□□ -1.79
TOPBP1-210ENST00000572787 LAMTOR3Q9UHA4 124 aa3.87□□□□□ -1.79
TOPBP1-210ENST00000572787 TBX21Q9UL17 535 aa3.87□□□□□ -1.79
TOPBP1-210ENST00000572787 ENPP4Q9Y6X5 453 aa3.87□□□□□ -1.79
TOPBP1-210ENST00000572787 RALGAPA1Q6GYQ0 2036 aa3.87□□□□□ -1.79
TOPBP1-210ENST00000572787 TNS3Q68CZ2 1445 aa3.87□□□□□ -1.79
TOPBP1-210ENST00000572787 VWA8A3KMH1 1905 aa3.86□□□□□ -1.79
TOPBP1-210ENST00000572787 YLPM1P49750 1951 aaKnown RBP3.86□□□□□ -1.79
TOPBP1-210ENST00000572787 hCG_1818297A0A087WSY0 165 aa3.86□□□□□ -1.79
TOPBP1-210ENST00000572787 IGHV4-30-2A0A087WSY4 118 aa3.86□□□□□ -1.79
TOPBP1-210ENST00000572787 A0A087WUU8 490 aa3.86□□□□□ -1.79
TOPBP1-210ENST00000572787 IGHV6-1A0A0B4J1U7 121 aa3.86□□□□□ -1.79
TOPBP1-210ENST00000572787 OR4C45A6NMZ5 311 aa3.86□□□□□ -1.79
TOPBP1-210ENST00000572787 A8MT66 165 aa3.86□□□□□ -1.79
TOPBP1-210ENST00000572787 F6UZH7 168 aa3.86□□□□□ -1.79
TOPBP1-210ENST00000572787 GYG2O15488 501 aa3.86□□□□□ -1.79
TOPBP1-210ENST00000572787 ZNF207O43670 478 aaKnown RBP3.86□□□□□ -1.79
TOPBP1-210ENST00000572787 SNAP91O60641 907 aa3.86□□□□□ -1.79
TOPBP1-210ENST00000572787 IGHV3-43DP0DP04 118 aa3.86□□□□□ -1.79
TOPBP1-210ENST00000572787 FOLR2P14207 255 aa3.86□□□□□ -1.79
TOPBP1-210ENST00000572787 RPL7P18124 248 aaKnown RBP3.86□□□□□ -1.79
TOPBP1-210ENST00000572787 CCL1P22362 96 aa3.86□□□□□ -1.79
TOPBP1-210ENST00000572787 RPS3P23396 243 aaKnown RBP eCLIP3.86□□□□□ -1.79
TOPBP1-210ENST00000572787 SRIP30626 198 aa3.86□□□□□ -1.79
TOPBP1-210ENST00000572787 S100A11P31949 105 aa3.86□□□□□ -1.79
TOPBP1-210ENST00000572787 ZNF138P52744 262 aa3.86□□□□□ -1.79
TOPBP1-210ENST00000572787 UBE2NP61088 152 aaKnown RBP3.86□□□□□ -1.79
TOPBP1-210ENST00000572787 PLCXD2Q0VAA5 305 aa3.86□□□□□ -1.79
TOPBP1-210ENST00000572787 DAZ2Q13117 558 aaKnown RBP3.86□□□□□ -1.79
TOPBP1-210ENST00000572787 BTN1A1Q13410 526 aa3.86□□□□□ -1.79
TOPBP1-210ENST00000572787 RHEBQ15382 184 aa3.86□□□□□ -1.79
TOPBP1-210ENST00000572787 NEDD8Q15843 81 aa3.86□□□□□ -1.79
TOPBP1-210ENST00000572787 SSX1Q16384 188 aa3.86□□□□□ -1.79
TOPBP1-210ENST00000572787 TIMM50Q3ZCQ8 353 aa3.86□□□□□ -1.79
TOPBP1-210ENST00000572787 UBE2NLQ5JXB2 153 aa3.86□□□□□ -1.79
TOPBP1-210ENST00000572787 CLLU1OSQ5K130 101 aa3.86□□□□□ -1.79
TOPBP1-210ENST00000572787 TMEM69Q5SWH9 247 aa3.86□□□□□ -1.79
TOPBP1-210ENST00000572787 Q6ZRP5 223 aa3.86□□□□□ -1.79
TOPBP1-210ENST00000572787 Q6ZSR6 202 aa3.86□□□□□ -1.79
TOPBP1-210ENST00000572787 LINC00173Q6ZV60 143 aa3.86□□□□□ -1.79
TOPBP1-210ENST00000572787 ATP5L2Q7Z4Y8 100 aa3.86□□□□□ -1.79
TOPBP1-210ENST00000572787 DEFB128Q7Z7B8 93 aa3.86□□□□□ -1.79
TOPBP1-210ENST00000572787 DAZ4Q86SG3 579 aaKnown RBP3.86□□□□□ -1.79
TOPBP1-210ENST00000572787 BAP18Q8IXM2 172 aa3.86□□□□□ -1.79
TOPBP1-210ENST00000572787 TMEM86AQ8N2M4 240 aa3.86□□□□□ -1.79
TOPBP1-210ENST00000572787 RFLNBQ8N5W9 214 aa3.86□□□□□ -1.79
TOPBP1-210ENST00000572787 ZIC4Q8N9L1 334 aa3.86□□□□□ -1.79
TOPBP1-210ENST00000572787 OR4C6Q8NH72 309 aa3.86□□□□□ -1.79
TOPBP1-210ENST00000572787 TMEM101Q96IK0 257 aa3.86□□□□□ -1.79
TOPBP1-210ENST00000572787 PRAC1Q96KF2 57 aa3.86□□□□□ -1.79
TOPBP1-210ENST00000572787 LINC01587Q99440 93 aa3.86□□□□□ -1.79
TOPBP1-210ENST00000572787 CLEC7AQ9BXN2 247 aa3.86□□□□□ -1.79
TOPBP1-210ENST00000572787 SLC29A3Q9BZD2 475 aa3.86□□□□□ -1.79
TOPBP1-210ENST00000572787 LINC00470Q9BZP3 86 aa3.86□□□□□ -1.79
TOPBP1-210ENST00000572787 COMMD5Q9GZQ3 224 aa3.86□□□□□ -1.79
TOPBP1-210ENST00000572787 OR2D2Q9H210 308 aa3.86□□□□□ -1.79
TOPBP1-210ENST00000572787 ZNF331Q9NQX6 463 aaPredicted RBP3.86□□□□□ -1.79
TOPBP1-210ENST00000572787 DAZ1Q9NQZ3 744 aaKnown RBP3.86□□□□□ -1.79
TOPBP1-210ENST00000572787 DAZ3Q9NR90 486 aaKnown RBP3.86□□□□□ -1.79
TOPBP1-210ENST00000572787 SPHK2Q9NRA0 654 aa3.86□□□□□ -1.79
TOPBP1-210ENST00000572787 AIG1Q9NVV5 245 aa3.86□□□□□ -1.79
TOPBP1-210ENST00000572787 RBM12B-AS1Q9P1G2 102 aa3.86□□□□□ -1.79
TOPBP1-210ENST00000572787 LINC00527Q9UJ94 153 aa3.86□□□□□ -1.79
TOPBP1-210ENST00000572787 ERG28Q9UKR5 140 aa3.86□□□□□ -1.79
TOPBP1-210ENST00000572787 TRAPPC2LQ9UL33 140 aa3.86□□□□□ -1.79
TOPBP1-210ENST00000572787 POMPQ9Y244 141 aa3.86□□□□□ -1.79
TOPBP1-210ENST00000572787 KLF13Q9Y2Y9 288 aaPredicted RBP3.86□□□□□ -1.79
TOPBP1-210ENST00000572787 PCYT1BQ9Y5K3 369 aaPredicted RBP3.86□□□□□ -1.79
TOPBP1-210ENST00000572787 PXMP4Q9Y6I8 212 aa3.86□□□□□ -1.79
TOPBP1-210ENST00000572787 SMCHD1A6NHR9 2005 aa3.86□□□□□ -1.79
TOPBP1-210ENST00000572787 ZNF609O15014 1411 aa3.86□□□□□ -1.79
TOPBP1-210ENST00000572787 DENND4BO75064 1496 aaPredicted RBP3.86□□□□□ -1.79
TOPBP1-210ENST00000572787 DNMT1P26358 1616 aaKnown RBP3.85□□□□□ -1.79
TOPBP1-210ENST00000572787 A0A0J9YY10 115 aa3.85□□□□□ -1.79
TOPBP1-210ENST00000572787 A0A1B0GX78 115 aa3.85□□□□□ -1.79
TOPBP1-210ENST00000572787 C20orf202A1L168 122 aa3.85□□□□□ -1.79
TOPBP1-210ENST00000572787 C5orf63A6NC05 138 aa3.85□□□□□ -1.79
TOPBP1-210ENST00000572787 RIIAD1A6NNX1 92 aa3.85□□□□□ -1.79
TOPBP1-210ENST00000572787 KLLNB2CW77 178 aa3.85□□□□□ -1.79
TOPBP1-210ENST00000572787 H3BSA7 217 aa3.85□□□□□ -1.79
TOPBP1-210ENST00000572787 TCF21O43680 179 aa3.85□□□□□ -1.79
TOPBP1-210ENST00000572787 ZNF354AO60765 605 aaPredicted RBP3.85□□□□□ -1.79
TOPBP1-210ENST00000572787 ZNF780AO75290 641 aaPredicted RBP3.85□□□□□ -1.79
TOPBP1-210ENST00000572787 IFNA7P01567 189 aa3.85□□□□□ -1.79
TOPBP1-210ENST00000572787 SOD3P08294 240 aa3.85□□□□□ -1.79
TOPBP1-210ENST00000572787 RPS4Y1P22090 263 aaKnown RBP3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms