RNA–Protein interactions for RNA: ENST00000572665.1

CIITA-208, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5

Gene CIITA, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-208ENST00000572665 RPL36Q9Y3U8 105 aaKnown RBP7.31□□□□□ -1.24
CIITA-208ENST00000572665 NOTCH3Q9UM47 2321 aa7.3□□□□□ -1.24
CIITA-208ENST00000572665 TRBV5-7A0A0A0MS05 114 aa7.3□□□□□ -1.24
CIITA-208ENST00000572665 IRGMA1A4Y4 181 aa7.3□□□□□ -1.24
CIITA-208ENST00000572665 NPIPB11E5RHQ5 1161 aa7.3□□□□□ -1.24
CIITA-208ENST00000572665 CCRL2O00421 344 aa7.3□□□□□ -1.24
CIITA-208ENST00000572665 EI24O14681 340 aa7.3□□□□□ -1.24
CIITA-208ENST00000572665 TXNL1O43396 289 aa7.3□□□□□ -1.24
CIITA-208ENST00000572665 RAMP3O60896 148 aa7.3□□□□□ -1.24
CIITA-208ENST00000572665 THBS3P49746 956 aa7.3□□□□□ -1.24
CIITA-208ENST00000572665 RPL23AP62750 156 aaKnown RBP7.3□□□□□ -1.24
CIITA-208ENST00000572665 ZNF816Q0VGE8 651 aaPredicted RBP7.3□□□□□ -1.24
CIITA-208ENST00000572665 MED21Q13503 144 aa7.3□□□□□ -1.24
CIITA-208ENST00000572665 GPR176Q14439 515 aa7.3□□□□□ -1.24
CIITA-208ENST00000572665 TMEM30BQ3MIR4 351 aa7.3□□□□□ -1.24
CIITA-208ENST00000572665 Q3ZCU0 254 aa7.3□□□□□ -1.24
CIITA-208ENST00000572665 CCDC58Q4VC31 144 aa7.3□□□□□ -1.24
CIITA-208ENST00000572665 TCTEX1D4Q5JR98 221 aa7.3□□□□□ -1.24
CIITA-208ENST00000572665 TEX38Q6PEX7 206 aa7.3□□□□□ -1.24
CIITA-208ENST00000572665 BAIAP2L2Q6UXY1 529 aa7.3□□□□□ -1.24
CIITA-208ENST00000572665 TMPRSS11AQ6ZMR5 421 aa7.3□□□□□ -1.24
CIITA-208ENST00000572665 STX19Q8N4C7 294 aa7.3□□□□□ -1.24
CIITA-208ENST00000572665 DRAM1Q8N682 238 aa7.3□□□□□ -1.24
CIITA-208ENST00000572665 C5orf56Q8N8D9 126 aa7.3□□□□□ -1.24
CIITA-208ENST00000572665 OR52M1Q8NGK5 317 aa7.3□□□□□ -1.24
CIITA-208ENST00000572665 OR10AC1Q8NH08 325 aa7.3□□□□□ -1.24
CIITA-208ENST00000572665 OR56B4Q8NH76 319 aa7.3□□□□□ -1.24
CIITA-208ENST00000572665 GPR148Q8TDV2 347 aa7.3□□□□□ -1.24
CIITA-208ENST00000572665 METTL9Q9H1A3 318 aa7.3□□□□□ -1.24
CIITA-208ENST00000572665 PPIL3Q9H2H8 161 aaKnown RBP7.3□□□□□ -1.24
CIITA-208ENST00000572665 AAMDCQ9H7C9 122 aa7.3□□□□□ -1.24
CIITA-208ENST00000572665 SPACA1Q9HBV2 294 aa7.3□□□□□ -1.24
CIITA-208ENST00000572665 CKLFQ9UBR5 152 aa7.3□□□□□ -1.24
CIITA-208ENST00000572665 PSG11Q9UQ72 335 aa7.3□□□□□ -1.24
CIITA-208ENST00000572665 ST3GAL6Q9Y274 331 aa7.3□□□□□ -1.24
CIITA-208ENST00000572665 A0A1W2PPI3 338 aa7.29□□□□□ -1.24
CIITA-208ENST00000572665 TMEM30CPA0ZSE6 113 aa7.29□□□□□ -1.24
CIITA-208ENST00000572665 K7EIL1 84 aa7.29□□□□□ -1.24
CIITA-208ENST00000572665 HSD17B6O14756 317 aa7.29□□□□□ -1.24
CIITA-208ENST00000572665 ORC5O43913 435 aa7.29□□□□□ -1.24
CIITA-208ENST00000572665 IGKV1D-33P01593 117 aa7.29□□□□□ -1.24
CIITA-208ENST00000572665 IGKV1-33P01594 117 aa7.29□□□□□ -1.24
CIITA-208ENST00000572665 IGHG2P01859 326 aa7.29□□□□□ -1.24
CIITA-208ENST00000572665 CGB3P0DN86 165 aa7.29□□□□□ -1.24
CIITA-208ENST00000572665 CGB7P0DN87 165 aa7.29□□□□□ -1.24
CIITA-208ENST00000572665 ZNF93P35789 620 aaPredicted RBP7.29□□□□□ -1.24
CIITA-208ENST00000572665 GNG10P50151 68 aa7.29□□□□□ -1.24
CIITA-208ENST00000572665 RCN1Q15293 331 aa7.29□□□□□ -1.24
CIITA-208ENST00000572665 LTC4SQ16873 150 aa7.29□□□□□ -1.24
CIITA-208ENST00000572665 MPV17LQ2QL34 196 aa7.29□□□□□ -1.24
CIITA-208ENST00000572665 CXorf66Q5JRM2 361 aaPredicted RBP7.29□□□□□ -1.24
CIITA-208ENST00000572665 NHLRC3Q5JS37 347 aa7.29□□□□□ -1.24
CIITA-208ENST00000572665 RSBN1Q5VWQ0 802 aaPredicted RBP7.29□□□□□ -1.24
CIITA-208ENST00000572665 RPL22L1Q6P5R6 122 aaKnown RBP7.29□□□□□ -1.24
CIITA-208ENST00000572665 MOB3BQ86TA1 216 aa7.29□□□□□ -1.24
CIITA-208ENST00000572665 TGIF2LXQ8IUE1 241 aa7.29□□□□□ -1.24
CIITA-208ENST00000572665 ZNF695Q8IW36 515 aa7.29□□□□□ -1.24
CIITA-208ENST00000572665 CBR4Q8N4T8 237 aa7.29□□□□□ -1.24
CIITA-208ENST00000572665 C8orf31Q8N9H6 132 aa7.29□□□□□ -1.24
CIITA-208ENST00000572665 KLHL30-AS1Q8NEE0 82 aa7.29□□□□□ -1.24
CIITA-208ENST00000572665 Q8NFD4 153 aa7.29□□□□□ -1.24
CIITA-208ENST00000572665 OR8H1Q8NGG4 311 aa7.29□□□□□ -1.24
CIITA-208ENST00000572665 OR51A2Q8NGJ7 313 aa7.29□□□□□ -1.24
CIITA-208ENST00000572665 OR13A1Q8NGR1 328 aa7.29□□□□□ -1.24
CIITA-208ENST00000572665 OR2T10Q8NGZ9 312 aa7.29□□□□□ -1.24
CIITA-208ENST00000572665 OR8U1Q8NH10 309 aa7.29□□□□□ -1.24
CIITA-208ENST00000572665 MRGPRDQ8TDS7 321 aa7.29□□□□□ -1.24
CIITA-208ENST00000572665 NEK7Q8TDX7 302 aa7.29□□□□□ -1.24
CIITA-208ENST00000572665 PDCD1LG2Q9BQ51 273 aa7.29□□□□□ -1.24
CIITA-208ENST00000572665 ISG20L2Q9H9L3 353 aaKnown RBP7.29□□□□□ -1.24
CIITA-208ENST00000572665 TMEM138Q9NPI0 162 aa7.29□□□□□ -1.24
CIITA-208ENST00000572665 IL36GQ9NZH8 169 aa7.29□□□□□ -1.24
CIITA-208ENST00000572665 PEMTQ9UBM1 199 aa7.29□□□□□ -1.24
CIITA-208ENST00000572665 AASSQ9UDR5 926 aa7.29□□□□□ -1.24
CIITA-208ENST00000572665 ING4Q9UNL4 249 aa7.29□□□□□ -1.24
CIITA-208ENST00000572665 TRAV24A0A0B4J272 114 aa7.28□□□□□ -1.24
CIITA-208ENST00000572665 NCBP2LA6PVI3 153 aaKnown RBP7.28□□□□□ -1.24
CIITA-208ENST00000572665 SDCBPO00560 298 aaPredicted RBP7.28□□□□□ -1.24
CIITA-208ENST00000572665 GABRPO00591 440 aa7.28□□□□□ -1.24
CIITA-208ENST00000572665 OR7C1O76099 320 aaPredicted RBP7.28□□□□□ -1.24
CIITA-208ENST00000572665 GTF2F2P13984 249 aa7.28□□□□□ -1.24
CIITA-208ENST00000572665 MYL12AP19105 171 aa7.28□□□□□ -1.24
CIITA-208ENST00000572665 EBI3Q14213 229 aa7.28□□□□□ -1.24
CIITA-208ENST00000572665 HNF4GQ14541 408 aa7.28□□□□□ -1.24
CIITA-208ENST00000572665 PNLIPRP3Q17RR3 467 aa7.28□□□□□ -1.24
CIITA-208ENST00000572665 DDI2Q5TDH0 399 aa7.28□□□□□ -1.24
CIITA-208ENST00000572665 LPCAT4Q643R3 524 aa7.28□□□□□ -1.24
CIITA-208ENST00000572665 TRAT1Q6PIZ9 186 aa7.28□□□□□ -1.24
CIITA-208ENST00000572665 OR2W3Q7Z3T1 314 aa7.28□□□□□ -1.24
CIITA-208ENST00000572665 ZNF329Q86UD4 541 aa7.28□□□□□ -1.24
CIITA-208ENST00000572665 STPG2Q8N412 459 aa7.28□□□□□ -1.24
CIITA-208ENST00000572665 LINC00311Q8N616 119 aa7.28□□□□□ -1.24
CIITA-208ENST00000572665 SUMF2Q8NBJ7 301 aa7.28□□□□□ -1.24
CIITA-208ENST00000572665 ZNF555Q8NEP9 628 aa7.28□□□□□ -1.24
CIITA-208ENST00000572665 OR52N1Q8NH53 320 aa7.28□□□□□ -1.24
CIITA-208ENST00000572665 RFESDQ8TAC1 157 aa7.28□□□□□ -1.24
CIITA-208ENST00000572665 ARL11Q969Q4 196 aa7.28□□□□□ -1.24
CIITA-208ENST00000572665 TMEM106AQ96A25 262 aa7.28□□□□□ -1.24
CIITA-208ENST00000572665 MRPS24Q96EL2 167 aaKnown RBP7.28□□□□□ -1.24
CIITA-208ENST00000572665 SLC29A1Q99808 456 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms