RNA–Protein interactions for RNA: ENST00000571545.1

CIITA-207, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 3

Gene CIITA, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-207ENST00000571545 PIPOXQ9P0Z9 390 aa7.68□□□□□ -1.18
CIITA-207ENST00000571545 KIAA1456Q9P272 454 aa7.68□□□□□ -1.18
CIITA-207ENST00000571545 ZNF107Q9UII5 783 aaPredicted RBP7.68□□□□□ -1.18
CIITA-207ENST00000571545 PTGES3LE9PB15 166 aa7.67□□□□□ -1.18
CIITA-207ENST00000571545 SLC31A2O15432 143 aa7.67□□□□□ -1.18
CIITA-207ENST00000571545 RAMP3O60896 148 aa7.67□□□□□ -1.18
CIITA-207ENST00000571545 VSIG8P0DPA2 414 aa7.67□□□□□ -1.18
CIITA-207ENST00000571545 SRMP19623 302 aa7.67□□□□□ -1.18
CIITA-207ENST00000571545 CHATP28329 748 aa7.67□□□□□ -1.18
CIITA-207ENST00000571545 MED22Q15528 200 aa7.67□□□□□ -1.18
CIITA-207ENST00000571545 HMGN3Q15651 99 aa7.67□□□□□ -1.18
CIITA-207ENST00000571545 C6orf141Q5SZD1 244 aa7.67□□□□□ -1.18
CIITA-207ENST00000571545 SIGIRRQ6IA17 410 aa7.67□□□□□ -1.18
CIITA-207ENST00000571545 LAIR2Q6ISS4 152 aa7.67□□□□□ -1.18
CIITA-207ENST00000571545 TMEM65Q6PI78 240 aa7.67□□□□□ -1.18
CIITA-207ENST00000571545 ETV3LQ6ZN32 361 aa7.67□□□□□ -1.18
CIITA-207ENST00000571545 RNF152Q8N8N0 203 aa7.67□□□□□ -1.18
CIITA-207ENST00000571545 OR5M8Q8NGP6 311 aa7.67□□□□□ -1.18
CIITA-207ENST00000571545 MRPL30Q8TCC3 161 aaKnown RBP7.67□□□□□ -1.18
CIITA-207ENST00000571545 C4orf3Q8WVX3 66 aa7.67□□□□□ -1.18
CIITA-207ENST00000571545 EDARADDQ8WWZ3 215 aa7.67□□□□□ -1.18
CIITA-207ENST00000571545 P2RX4Q99571 388 aa7.67□□□□□ -1.18
CIITA-207ENST00000571545 TM2D1Q9BX74 207 aa7.67□□□□□ -1.18
CIITA-207ENST00000571545 ISYNA1Q9NPH2 558 aa7.67□□□□□ -1.18
CIITA-207ENST00000571545 PLSCR3Q9NRY6 295 aa7.67□□□□□ -1.18
CIITA-207ENST00000571545 PLEKHJ1Q9NW61 149 aa7.67□□□□□ -1.18
CIITA-207ENST00000571545 OR5H14A6NHG9 310 aa7.66□□□□□ -1.18
CIITA-207ENST00000571545 CCL24O00175 119 aa7.66□□□□□ -1.18
CIITA-207ENST00000571545 ITGB1BP1O14713 200 aa7.66□□□□□ -1.18
CIITA-207ENST00000571545 RAB29O14966 203 aa7.66□□□□□ -1.18
CIITA-207ENST00000571545 SLC22A1O15245 554 aa7.66□□□□□ -1.18
CIITA-207ENST00000571545 NBR2O15453 112 aa7.66□□□□□ -1.18
CIITA-207ENST00000571545 RBBP9O75884 186 aa7.66□□□□□ -1.18
CIITA-207ENST00000571545 IGHG4P01861 327 aa7.66□□□□□ -1.18
CIITA-207ENST00000571545 HLA-DRB1P01911 266 aa7.66□□□□□ -1.18
CIITA-207ENST00000571545 UCHL1P09936 223 aa7.66□□□□□ -1.18
CIITA-207ENST00000571545 MC5RP33032 325 aa7.66□□□□□ -1.18
CIITA-207ENST00000571545 PPP1CCP36873 323 aaKnown RBP7.66□□□□□ -1.18
CIITA-207ENST00000571545 HSPA13P48723 471 aa7.66□□□□□ -1.18
CIITA-207ENST00000571545 PSMD7P51665 324 aa7.66□□□□□ -1.18
CIITA-207ENST00000571545 ZNF134P52741 427 aa7.66□□□□□ -1.18
CIITA-207ENST00000571545 KIR2DS1Q14954 304 aa7.66□□□□□ -1.18
CIITA-207ENST00000571545 C9orf66Q5T8R8 295 aa7.66□□□□□ -1.18
CIITA-207ENST00000571545 ZNF833PQ6ZTB9 187 aa7.66□□□□□ -1.18
CIITA-207ENST00000571545 CEACAM19Q7Z692 300 aa7.66□□□□□ -1.18
CIITA-207ENST00000571545 SVOPQ8N4V2 548 aa7.66□□□□□ -1.18
CIITA-207ENST00000571545 TCTEX1D1Q8N7M0 179 aa7.66□□□□□ -1.18
CIITA-207ENST00000571545 IL1F10Q8WWZ1 152 aa7.66□□□□□ -1.18
CIITA-207ENST00000571545 PLGRKTQ9HBL7 147 aa7.66□□□□□ -1.18
CIITA-207ENST00000571545 LINC00527Q9UJ94 153 aa7.66□□□□□ -1.18
CIITA-207ENST00000571545 BLOC1S6Q9UL45 172 aa7.66□□□□□ -1.18
CIITA-207ENST00000571545 LSM2Q9Y333 95 aaKnown RBP7.66□□□□□ -1.18
CIITA-207ENST00000571545 SAA2-SAA4A0A096LPE2 208 aa7.65□□□□□ -1.18
CIITA-207ENST00000571545 TRBV6-6A0A0A6YYG2 114 aa7.65□□□□□ -1.18
CIITA-207ENST00000571545 TMEM14DPA8MWL7 114 aa7.65□□□□□ -1.18
CIITA-207ENST00000571545 K7EIL1 84 aa7.65□□□□□ -1.18
CIITA-207ENST00000571545 RGS10O43665 173 aa7.65□□□□□ -1.18
CIITA-207ENST00000571545 NAPSAO96009 420 aa7.65□□□□□ -1.18
CIITA-207ENST00000571545 RPLP1P05386 114 aaKnown RBP7.65□□□□□ -1.18
CIITA-207ENST00000571545 OR8U8P0C7N1 319 aa7.65□□□□□ -1.18
CIITA-207ENST00000571545 SAA2P0DJI9 122 aaPredicted RBP7.65□□□□□ -1.18
CIITA-207ENST00000571545 ARSBP15848 533 aa7.65□□□□□ -1.18
CIITA-207ENST00000571545 ZBTB25P24278 435 aa7.65□□□□□ -1.18
CIITA-207ENST00000571545 PSMB8P28062 276 aa7.65□□□□□ -1.18
CIITA-207ENST00000571545 BLVRBP30043 206 aaPredicted RBP7.65□□□□□ -1.18
CIITA-207ENST00000571545 RAB25P57735 213 aa7.65□□□□□ -1.18
CIITA-207ENST00000571545 ACTBP60709 375 aa7.65□□□□□ -1.18
CIITA-207ENST00000571545 MRPS15P82914 257 aaKnown RBP7.65□□□□□ -1.18
CIITA-207ENST00000571545 DGCR2P98153 550 aa7.65□□□□□ -1.18
CIITA-207ENST00000571545 CFHR3Q02985 330 aa7.65□□□□□ -1.18
CIITA-207ENST00000571545 DEFB121Q5J5C9 76 aa7.65□□□□□ -1.18
CIITA-207ENST00000571545 C6orf201Q7Z4U5 140 aa7.65□□□□□ -1.18
CIITA-207ENST00000571545 LRRTM1Q86UE6 522 aa7.65□□□□□ -1.18
CIITA-207ENST00000571545 CMYA5Q8N3K9 4069 aa7.65□□□□□ -1.18
CIITA-207ENST00000571545 OR52L2PQ8NGH6 319 aa7.65□□□□□ -1.18
CIITA-207ENST00000571545 UBE2E2Q96LR5 201 aa7.65□□□□□ -1.18
CIITA-207ENST00000571545 KCTD7Q96MP8 289 aa7.65□□□□□ -1.18
CIITA-207ENST00000571545 SULT4A1Q9BR01 284 aa7.65□□□□□ -1.18
CIITA-207ENST00000571545 CENPOQ9BU64 300 aa7.65□□□□□ -1.18
CIITA-207ENST00000571545 ANKRD60Q9BZ19 345 aa7.65□□□□□ -1.18
CIITA-207ENST00000571545 C12orf4Q9NQ89 552 aa7.65□□□□□ -1.18
CIITA-207ENST00000571545 RNF150Q9ULK6 438 aa7.65□□□□□ -1.18
CIITA-207ENST00000571545 HSF4Q9ULV5 492 aa7.65□□□□□ -1.18
CIITA-207ENST00000571545 SLC17A2O00624 439 aa7.64□□□□□ -1.19
CIITA-207ENST00000571545 HSPA12AO43301 675 aa7.64□□□□□ -1.19
CIITA-207ENST00000571545 NDUFA3O95167 84 aa7.64□□□□□ -1.19
CIITA-207ENST00000571545 HSMCR30P0CW71 290 aa7.64□□□□□ -1.19
CIITA-207ENST00000571545 SLC2A2P11168 524 aaPredicted RBP7.64□□□□□ -1.19
CIITA-207ENST00000571545 MYF6P23409 242 aa7.64□□□□□ -1.19
CIITA-207ENST00000571545 VHLP40337 213 aa7.64□□□□□ -1.19
CIITA-207ENST00000571545 SERPINB10P48595 397 aa7.64□□□□□ -1.19
CIITA-207ENST00000571545 INSL3P51460 131 aa7.64□□□□□ -1.19
CIITA-207ENST00000571545 F2RL1P55085 397 aa7.64□□□□□ -1.19
CIITA-207ENST00000571545 HLA-DRB3P79483 266 aa7.64□□□□□ -1.19
CIITA-207ENST00000571545 CD69Q07108 199 aa7.64□□□□□ -1.19
CIITA-207ENST00000571545 MLLT11Q13015 90 aaPredicted RBP7.64□□□□□ -1.19
CIITA-207ENST00000571545 TPBGQ13641 420 aa7.64□□□□□ -1.19
CIITA-207ENST00000571545 GNMTQ14749 295 aa7.64□□□□□ -1.19
CIITA-207ENST00000571545 PLGLAQ15195 96 aa7.64□□□□□ -1.19
CIITA-207ENST00000571545 RAB11BQ15907 218 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms