RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 HIVEP2P31629 2446 aa3.05□□□□□ -1.92
NUP88-202ENST00000570937 TRBV2A0A0J9YWF9 115 aa3.04□□□□□ -1.92
NUP88-202ENST00000570937 KIR2DS1A0A191URI9 304 aa3.04□□□□□ -1.92
NUP88-202ENST00000570937 FAM230AA0A1W2PPH8 454 aa3.04□□□□□ -1.92
NUP88-202ENST00000570937 A0A1W2PRV1 198 aa3.04□□□□□ -1.92
NUP88-202ENST00000570937 C5orf63A6NC05 138 aa3.04□□□□□ -1.92
NUP88-202ENST00000570937 C5orf52A6NGY3 159 aa3.04□□□□□ -1.92
NUP88-202ENST00000570937 TMEM212A6NML5 194 aa3.04□□□□□ -1.92
NUP88-202ENST00000570937 OR2AT4A6NND4 320 aa3.04□□□□□ -1.92
NUP88-202ENST00000570937 E5RGE8 158 aa3.04□□□□□ -1.92
NUP88-202ENST00000570937 J3QRE1 110 aa3.04□□□□□ -1.92
NUP88-202ENST00000570937 J3QT63 122 aa3.04□□□□□ -1.92
NUP88-202ENST00000570937 CASQ2O14958 399 aaPredicted RBP3.04□□□□□ -1.92
NUP88-202ENST00000570937 MAGEB3O15480 346 aa3.04□□□□□ -1.92
NUP88-202ENST00000570937 MAGEB4O15481 346 aaPredicted RBP3.04□□□□□ -1.92
NUP88-202ENST00000570937 PHF1O43189 567 aaPredicted RBP3.04□□□□□ -1.92
NUP88-202ENST00000570937 TCF21O43680 179 aa3.04□□□□□ -1.92
NUP88-202ENST00000570937 ENSAO43768 121 aaKnown RBP3.04□□□□□ -1.92
NUP88-202ENST00000570937 IGLV3-1P01715 115 aa3.04□□□□□ -1.92
NUP88-202ENST00000570937 CD2P06729 351 aa3.04□□□□□ -1.92
NUP88-202ENST00000570937 CCL1P22362 96 aa3.04□□□□□ -1.92
NUP88-202ENST00000570937 GLRA1P23415 457 aa3.04□□□□□ -1.92
NUP88-202ENST00000570937 ACKR3P25106 362 aa3.04□□□□□ -1.92
NUP88-202ENST00000570937 FCGR2BP31994 310 aaPredicted RBP3.04□□□□□ -1.92
NUP88-202ENST00000570937 FCGR2CP31995 323 aa3.04□□□□□ -1.92
NUP88-202ENST00000570937 S100A5P33763 92 aa3.04□□□□□ -1.92
NUP88-202ENST00000570937 PMELP40967 661 aa3.04□□□□□ -1.92
NUP88-202ENST00000570937 HAAOP46952 286 aa3.04□□□□□ -1.92
NUP88-202ENST00000570937 TGM4P49221 684 aa3.04□□□□□ -1.92
NUP88-202ENST00000570937 ATP1B3P54709 279 aa3.04□□□□□ -1.92
NUP88-202ENST00000570937 OR12D2P58182 307 aa3.04□□□□□ -1.92
NUP88-202ENST00000570937 ELF3P78545 371 aaPredicted RBP3.04□□□□□ -1.92
NUP88-202ENST00000570937 ZNF85Q03923 595 aa3.04□□□□□ -1.92
NUP88-202ENST00000570937 MFGE8Q08431 387 aaPredicted RBP3.04□□□□□ -1.92
NUP88-202ENST00000570937 ZNF154Q13106 437 aa3.04□□□□□ -1.92
NUP88-202ENST00000570937 SMIM21Q3B7S5 101 aa3.04□□□□□ -1.92
NUP88-202ENST00000570937 TP53I3Q53FA7 332 aa3.04□□□□□ -1.92
NUP88-202ENST00000570937 SPRNQ5BIV9 151 aa3.04□□□□□ -1.92
NUP88-202ENST00000570937 LRRC10Q5BKY1 277 aa3.04□□□□□ -1.92
NUP88-202ENST00000570937 C9orf66Q5T8R8 295 aa3.04□□□□□ -1.92
NUP88-202ENST00000570937 OGFRL1Q5TC84 451 aaPredicted RBP3.04□□□□□ -1.92
NUP88-202ENST00000570937 ZNF691Q5VV52 312 aa3.04□□□□□ -1.92
NUP88-202ENST00000570937 METTL11BQ5VVY1 283 aa3.04□□□□□ -1.92
NUP88-202ENST00000570937 PRAMEF6Q5VXH4 476 aa3.04□□□□□ -1.92
NUP88-202ENST00000570937 TEX36Q5VZQ5 186 aa3.04□□□□□ -1.92
NUP88-202ENST00000570937 RPL22L1Q6P5R6 122 aaKnown RBP3.04□□□□□ -1.92
NUP88-202ENST00000570937 CCBE1Q6UXH8 406 aaPredicted RBP3.04□□□□□ -1.92
NUP88-202ENST00000570937 WDR82Q6UXN9 313 aa3.04□□□□□ -1.92
NUP88-202ENST00000570937 ZNF826PQ6ZT77 177 aa3.04□□□□□ -1.92
NUP88-202ENST00000570937 SSX6Q7RTT6 188 aa3.04□□□□□ -1.92
NUP88-202ENST00000570937 LHFPL3Q86UP9 236 aa3.04□□□□□ -1.92
NUP88-202ENST00000570937 SERPINA12Q8IW75 414 aa3.04□□□□□ -1.92
NUP88-202ENST00000570937 MKXQ8IYA7 352 aa3.04□□□□□ -1.92
NUP88-202ENST00000570937 STX19Q8N4C7 294 aa3.04□□□□□ -1.92
NUP88-202ENST00000570937 BPIFB2Q8N4F0 458 aa3.04□□□□□ -1.92
NUP88-202ENST00000570937 ZSCAN4Q8NAM6 433 aaPredicted RBP3.04□□□□□ -1.92
NUP88-202ENST00000570937 Q8NFD4 153 aa3.04□□□□□ -1.92
NUP88-202ENST00000570937 OR52I1Q8NGK6 324 aa3.04□□□□□ -1.92
NUP88-202ENST00000570937 OR5D14Q8NGL3 314 aa3.04□□□□□ -1.92
NUP88-202ENST00000570937 OR2G2Q8NGZ5 317 aa3.04□□□□□ -1.92
NUP88-202ENST00000570937 OR5AK2Q8NH90 309 aa3.04□□□□□ -1.92
NUP88-202ENST00000570937 TSEN15Q8WW01 171 aaKnown RBP3.04□□□□□ -1.92
NUP88-202ENST00000570937 TMEM158Q8WZ71 300 aa3.04□□□□□ -1.92
NUP88-202ENST00000570937 THRSPQ92748 146 aa3.04□□□□□ -1.92
NUP88-202ENST00000570937 RPL3LQ92901 407 aaKnown RBP3.04□□□□□ -1.92
NUP88-202ENST00000570937 MYDGFQ969H8 173 aa3.04□□□□□ -1.92
NUP88-202ENST00000570937 BORCS8Q96FH0 119 aa3.04□□□□□ -1.92
NUP88-202ENST00000570937 TMEM80Q96HE8 168 aa3.04□□□□□ -1.92
NUP88-202ENST00000570937 C4orf36Q96KX1 117 aa3.04□□□□□ -1.92
NUP88-202ENST00000570937 SUCNR1Q9BXA5 334 aa3.04□□□□□ -1.92
NUP88-202ENST00000570937 PKIBQ9C010 78 aa3.04□□□□□ -1.92
NUP88-202ENST00000570937 CHST5Q9GZS9 411 aa3.04□□□□□ -1.92
NUP88-202ENST00000570937 OR51I2Q9H344 312 aa3.04□□□□□ -1.92
NUP88-202ENST00000570937 RHOFQ9HBH0 211 aa3.04□□□□□ -1.92
NUP88-202ENST00000570937 AMBNQ9NP70 447 aa3.04□□□□□ -1.92
NUP88-202ENST00000570937 BATF3Q9NR55 127 aa3.04□□□□□ -1.92
NUP88-202ENST00000570937 BABAM2Q9NXR7 383 aa3.04□□□□□ -1.92
NUP88-202ENST00000570937 SCN3BQ9NY72 215 aa3.04□□□□□ -1.92
NUP88-202ENST00000570937 CNOT2Q9NZN8 540 aaKnown RBP3.04□□□□□ -1.92
NUP88-202ENST00000570937 ZNF581Q9P0T4 197 aa3.04□□□□□ -1.92
NUP88-202ENST00000570937 KAAG1Q9UBP8 84 aa3.04□□□□□ -1.92
NUP88-202ENST00000570937 CKLFQ9UBR5 152 aa3.04□□□□□ -1.92
NUP88-202ENST00000570937 DIMT1Q9UNQ2 313 aaKnown RBP3.04□□□□□ -1.92
NUP88-202ENST00000570937 ERGIC3Q9Y282 383 aa3.04□□□□□ -1.92
NUP88-202ENST00000570937 NSG2Q9Y328 171 aa3.04□□□□□ -1.92
NUP88-202ENST00000570937 CAB39Q9Y376 341 aaPredicted RBP3.04□□□□□ -1.92
NUP88-202ENST00000570937 EXOSC1Q9Y3B2 195 aaKnown RBP3.04□□□□□ -1.92
NUP88-202ENST00000570937 INSIG2Q9Y5U4 225 aa3.04□□□□□ -1.92
NUP88-202ENST00000570937 V9GYS6 101 aa3.04□□□□□ -1.92
NUP88-202ENST00000570937 ACANP16112 2415 aa3.04□□□□□ -1.92
NUP88-202ENST00000570937 NF1P21359 2839 aa3.04□□□□□ -1.92
NUP88-202ENST00000570937 ZANQ9Y493 2812 aa3.04□□□□□ -1.92
NUP88-202ENST00000570937 VPS13CQ709C8 3753 aa3.04□□□□□ -1.92
NUP88-202ENST00000570937 TEP1Q99973 2627 aaKnown RBP3.03□□□□□ -1.92
NUP88-202ENST00000570937 IGHV3OR15-7A0A075B7D8 119 aa3.03□□□□□ -1.92
NUP88-202ENST00000570937 A0A0B4J203 849 aa3.03□□□□□ -1.92
NUP88-202ENST00000570937 IGHV3-16A0A0C4DH30 117 aa3.03□□□□□ -1.92
NUP88-202ENST00000570937 IGHV2-70DA0A0C4DH43 119 aa3.03□□□□□ -1.92
NUP88-202ENST00000570937 A0A1B0GTI1 187 aa3.03□□□□□ -1.92
NUP88-202ENST00000570937 LOC107986453A0A1B0GWG9 222 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms