RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 ZNF620Q6ZNG0 422 aa3□□□□□ -1.93
SMG6-208ENST00000570874 RASSF6Q6ZTQ3 369 aa3□□□□□ -1.93
SMG6-208ENST00000570874 HIST2H3AQ71DI3 136 aa3□□□□□ -1.93
SMG6-208ENST00000570874 FA2HQ7L5A8 372 aa3□□□□□ -1.93
SMG6-208ENST00000570874 COX8CQ7Z4L0 72 aa3□□□□□ -1.93
SMG6-208ENST00000570874 FAM19A1Q7Z5A9 133 aa3□□□□□ -1.93
SMG6-208ENST00000570874 ATG4DQ86TL0 474 aaPredicted RBP3□□□□□ -1.93
SMG6-208ENST00000570874 DTX2Q86UW9 622 aa3□□□□□ -1.93
SMG6-208ENST00000570874 ZGRF1Q86YA3 2104 aa3□□□□□ -1.93
SMG6-208ENST00000570874 BAP18Q8IXM2 172 aa3□□□□□ -1.93
SMG6-208ENST00000570874 MMD2Q8IY49 270 aa3□□□□□ -1.93
SMG6-208ENST00000570874 BPIFB2Q8N4F0 458 aa3□□□□□ -1.93
SMG6-208ENST00000570874 ZADH2Q8N4Q0 377 aa3□□□□□ -1.93
SMG6-208ENST00000570874 PAQR4Q8N4S7 273 aaPredicted RBP3□□□□□ -1.93
SMG6-208ENST00000570874 C12orf45Q8N5I9 185 aaPredicted RBP3□□□□□ -1.93
SMG6-208ENST00000570874 LINC01356Q8N9X3 169 aa3□□□□□ -1.93
SMG6-208ENST00000570874 SUMF1Q8NBK3 374 aa3□□□□□ -1.93
SMG6-208ENST00000570874 PRSS33Q8NF86 280 aa3□□□□□ -1.93
SMG6-208ENST00000570874 OR8G5Q8NG78 346 aa3□□□□□ -1.93
SMG6-208ENST00000570874 OR51S1Q8NGJ8 323 aa3□□□□□ -1.93
SMG6-208ENST00000570874 OR4C13Q8NGP0 309 aa3□□□□□ -1.93
SMG6-208ENST00000570874 OR1S2Q8NGQ3 325 aa3□□□□□ -1.93
SMG6-208ENST00000570874 OR4X1Q8NH49 305 aa3□□□□□ -1.93
SMG6-208ENST00000570874 ZPLD1Q8TCW7 415 aa3□□□□□ -1.93
SMG6-208ENST00000570874 ZNRF4Q8WWF5 429 aa3□□□□□ -1.93
SMG6-208ENST00000570874 DEDD2Q8WXF8 326 aa3□□□□□ -1.93
SMG6-208ENST00000570874 GALMQ96C23 342 aa3□□□□□ -1.93
SMG6-208ENST00000570874 CMBLQ96DG6 245 aa3□□□□□ -1.93
SMG6-208ENST00000570874 HYLS1Q96M11 299 aa3□□□□□ -1.93
SMG6-208ENST00000570874 GNRHR2Q96P88 292 aa3□□□□□ -1.93
SMG6-208ENST00000570874 RCHY1Q96PM5 261 aa3□□□□□ -1.93
SMG6-208ENST00000570874 GPER1Q99527 375 aa3□□□□□ -1.93
SMG6-208ENST00000570874 P2RX4Q99571 388 aa3□□□□□ -1.93
SMG6-208ENST00000570874 MGLLQ99685 303 aa3□□□□□ -1.93
SMG6-208ENST00000570874 DCTN5Q9BTE1 182 aa3□□□□□ -1.93
SMG6-208ENST00000570874 TAPBPLQ9BX59 468 aa3□□□□□ -1.93
SMG6-208ENST00000570874 TSSK6Q9BXA6 273 aa3□□□□□ -1.93
SMG6-208ENST00000570874 TTTY10Q9BZA0 68 aa3□□□□□ -1.93
SMG6-208ENST00000570874 MAP1LC3BQ9GZQ8 125 aa3□□□□□ -1.93
SMG6-208ENST00000570874 SHARPINQ9H0F6 387 aa3□□□□□ -1.93
SMG6-208ENST00000570874 OR52D1Q9H346 318 aa3□□□□□ -1.93
SMG6-208ENST00000570874 PRORYQ9H606 182 aa3□□□□□ -1.93
SMG6-208ENST00000570874 RNF167Q9H6Y7 350 aa3□□□□□ -1.93
SMG6-208ENST00000570874 SLC25A19Q9HC21 320 aa3□□□□□ -1.93
SMG6-208ENST00000570874 GALNT9Q9HCQ5 603 aa3□□□□□ -1.93
SMG6-208ENST00000570874 FOXJ2Q9P0K8 574 aa3□□□□□ -1.93
SMG6-208ENST00000570874 ZFP30Q9Y2G7 519 aa3□□□□□ -1.93
SMG6-208ENST00000570874 CHD3Q12873 2000 aaKnown RBP3□□□□□ -1.93
SMG6-208ENST00000570874 IGHV1-45A0A0A0MS14 117 aa2.99□□□□□ -1.93
SMG6-208ENST00000570874 BORCS7-ASMTA0A0B4J1R7 106 aa2.99□□□□□ -1.93
SMG6-208ENST00000570874 A0A0X1KG70 313 aa2.99□□□□□ -1.93
SMG6-208ENST00000570874 A0A1B0GW55 424 aa2.99□□□□□ -1.93
SMG6-208ENST00000570874 TMEM72A0PK05 275 aa2.99□□□□□ -1.93
SMG6-208ENST00000570874 MEIOCA2RUB1 952 aa2.99□□□□□ -1.93
SMG6-208ENST00000570874 OR2M5A3KFT3 312 aa2.99□□□□□ -1.93
SMG6-208ENST00000570874 ZNF732B4DXR9 585 aa2.99□□□□□ -1.93
SMG6-208ENST00000570874 KRBOX1C9JBD0 128 aa2.99□□□□□ -1.93
SMG6-208ENST00000570874 ZNF593O00488 134 aaPredicted RBP2.99□□□□□ -1.93
SMG6-208ENST00000570874 DEGS1O15121 323 aa2.99□□□□□ -1.93
SMG6-208ENST00000570874 SPINT2O43291 252 aa2.99□□□□□ -1.93
SMG6-208ENST00000570874 KLF7O75840 302 aaPredicted RBP2.99□□□□□ -1.93
SMG6-208ENST00000570874 NDUFB4O95168 129 aa2.99□□□□□ -1.93
SMG6-208ENST00000570874 HLA-DPB1P04440 258 aa2.99□□□□□ -1.93
SMG6-208ENST00000570874 GYPBP06028 91 aa2.99□□□□□ -1.93
SMG6-208ENST00000570874 CRYGDP07320 174 aa2.99□□□□□ -1.93
SMG6-208ENST00000570874 SP1P08047 785 aa2.99□□□□□ -1.93
SMG6-208ENST00000570874 ZNF883P0CG24 379 aa2.99□□□□□ -1.93
SMG6-208ENST00000570874 DUX4L2P0CJ85 424 aa2.99□□□□□ -1.93
SMG6-208ENST00000570874 DUX4L3P0CJ86 424 aa2.99□□□□□ -1.93
SMG6-208ENST00000570874 DUX4L5P0CJ88 424 aa2.99□□□□□ -1.93
SMG6-208ENST00000570874 DUX4L6P0CJ89 424 aa2.99□□□□□ -1.93
SMG6-208ENST00000570874 DUX4L7P0CJ90 424 aa2.99□□□□□ -1.93
SMG6-208ENST00000570874 COX6A1P12074 109 aa2.99□□□□□ -1.93
SMG6-208ENST00000570874 GADD45AP24522 165 aa2.99□□□□□ -1.93
SMG6-208ENST00000570874 EDNRAP25101 427 aa2.99□□□□□ -1.93
SMG6-208ENST00000570874 HOXD3P31249 432 aaPredicted RBP2.99□□□□□ -1.93
SMG6-208ENST00000570874 TNFSF8P32971 234 aa2.99□□□□□ -1.93
SMG6-208ENST00000570874 DUTP33316 252 aaKnown RBP2.99□□□□□ -1.93
SMG6-208ENST00000570874 HRH1P35367 487 aa2.99□□□□□ -1.93
SMG6-208ENST00000570874 MNDAP41218 407 aa2.99□□□□□ -1.93
SMG6-208ENST00000570874 SOX3P41225 446 aa2.99□□□□□ -1.93
SMG6-208ENST00000570874 ZNF84P51523 738 aa2.99□□□□□ -1.93
SMG6-208ENST00000570874 TDGF1P3P51864 188 aa2.99□□□□□ -1.93
SMG6-208ENST00000570874 HCCSP53701 268 aa2.99□□□□□ -1.93
SMG6-208ENST00000570874 RIPPLY3P57055 190 aa2.99□□□□□ -1.93
SMG6-208ENST00000570874 PSG4Q00888 419 aa2.99□□□□□ -1.93
SMG6-208ENST00000570874 Q0VFX4 171 aa2.99□□□□□ -1.93
SMG6-208ENST00000570874 RAB40BQ12829 278 aa2.99□□□□□ -1.93
SMG6-208ENST00000570874 BTN1A1Q13410 526 aa2.99□□□□□ -1.93
SMG6-208ENST00000570874 UNC119Q13432 240 aa2.99□□□□□ -1.93
SMG6-208ENST00000570874 PPP1R1AQ13522 171 aa2.99□□□□□ -1.93
SMG6-208ENST00000570874 GNMTQ14749 295 aa2.99□□□□□ -1.93
SMG6-208ENST00000570874 FCN2Q15485 313 aa2.99□□□□□ -1.93
SMG6-208ENST00000570874 SSX1Q16384 188 aa2.99□□□□□ -1.93
SMG6-208ENST00000570874 CLEC12BQ2HXU8 276 aa2.99□□□□□ -1.93
SMG6-208ENST00000570874 ANXA2RQ3ZCQ2 193 aa2.99□□□□□ -1.93
SMG6-208ENST00000570874 ALG10BQ5I7T1 473 aa2.99□□□□□ -1.93
SMG6-208ENST00000570874 AWAT2Q6E213 333 aa2.99□□□□□ -1.93
SMG6-208ENST00000570874 LAMTOR1Q6IAA8 161 aa2.99□□□□□ -1.93
SMG6-208ENST00000570874 DUX4L9Q6RFH8 374 aaPredicted RBP2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms