RNA–Protein interactions for RNA: ENST00000570659.5

SMG6-205, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 592 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-205ENST00000570659 HTR3BO95264 441 aa5.29□□□□□ -1.56
SMG6-205ENST00000570659 MT-ND2P03891 347 aa5.29□□□□□ -1.56
SMG6-205ENST00000570659 IGKV1-16P04430 117 aa5.29□□□□□ -1.56
SMG6-205ENST00000570659 HMGN1P05114 100 aa5.29□□□□□ -1.56
SMG6-205ENST00000570659 FOLR2P14207 255 aa5.29□□□□□ -1.56
SMG6-205ENST00000570659 ZP3P21754 424 aa5.29□□□□□ -1.56
SMG6-205ENST00000570659 GTF2A1P52655 376 aaPredicted RBP5.29□□□□□ -1.56
SMG6-205ENST00000570659 IL13RA2Q14627 380 aa5.29□□□□□ -1.56
SMG6-205ENST00000570659 C4orf46Q504U0 113 aa5.29□□□□□ -1.56
SMG6-205ENST00000570659 SYT6Q5T7P8 510 aaPredicted RBP5.29□□□□□ -1.56
SMG6-205ENST00000570659 ASCL4Q6XD76 172 aa5.29□□□□□ -1.56
SMG6-205ENST00000570659 LINC00336Q6ZUF6 198 aa5.29□□□□□ -1.56
SMG6-205ENST00000570659 ADGRG5Q8IZF4 528 aa5.29□□□□□ -1.56
SMG6-205ENST00000570659 DRAXINQ8NBI3 349 aaPredicted RBP5.29□□□□□ -1.56
SMG6-205ENST00000570659 KCNG3Q8TAE7 436 aa5.29□□□□□ -1.56
SMG6-205ENST00000570659 ARPC5LQ9BPX5 153 aa5.29□□□□□ -1.56
SMG6-205ENST00000570659 CST11Q9H112 138 aa5.29□□□□□ -1.56
SMG6-205ENST00000570659 ZNF355PQ9NSJ1 428 aa5.29□□□□□ -1.56
SMG6-205ENST00000570659 CHCHD3Q9NX63 227 aaKnown RBP5.29□□□□□ -1.56
SMG6-205ENST00000570659 GNG12Q9UBI6 72 aa5.29□□□□□ -1.56
SMG6-205ENST00000570659 PEF1Q9UBV8 284 aaKnown RBP5.29□□□□□ -1.56
SMG6-205ENST00000570659 ZNF230Q9UIE0 474 aaPredicted RBP5.29□□□□□ -1.56
SMG6-205ENST00000570659 TMEM14AQ9Y6G1 99 aa5.29□□□□□ -1.56
SMG6-205ENST00000570659 S4R3C0 116 aa5.29□□□□□ -1.56
SMG6-205ENST00000570659 LOC102724200A0A096LPH7 203 aaPredicted RBP5.28□□□□□ -1.56
SMG6-205ENST00000570659 C13orf42A0A1B0GVH6 325 aa5.28□□□□□ -1.56
SMG6-205ENST00000570659 TMEM213A2RRL7 107 aa5.28□□□□□ -1.56
SMG6-205ENST00000570659 H0YJW9 148 aa5.28□□□□□ -1.56
SMG6-205ENST00000570659 H3BNX3 289 aa5.28□□□□□ -1.56
SMG6-205ENST00000570659 AIPO00170 330 aa5.28□□□□□ -1.56
SMG6-205ENST00000570659 ORC5O43913 435 aa5.28□□□□□ -1.56
SMG6-205ENST00000570659 OR2A4O95047 310 aa5.28□□□□□ -1.56
SMG6-205ENST00000570659 FADS2O95864 444 aaKnown RBP5.28□□□□□ -1.56
SMG6-205ENST00000570659 SERPINA3P01011 423 aa5.28□□□□□ -1.56
SMG6-205ENST00000570659 IGLV2-23P01705 113 aa5.28□□□□□ -1.56
SMG6-205ENST00000570659 KRT8P05787 483 aa5.28□□□□□ -1.56
SMG6-205ENST00000570659 RPL35AP18077 110 aaKnown RBP5.28□□□□□ -1.56
SMG6-205ENST00000570659 IL3RAP26951 378 aa5.28□□□□□ -1.56
SMG6-205ENST00000570659 POLR2IP36954 125 aaKnown RBP5.28□□□□□ -1.56
SMG6-205ENST00000570659 DAPP51397 102 aa5.28□□□□□ -1.56
SMG6-205ENST00000570659 CRISP1P54107 249 aa5.28□□□□□ -1.56
SMG6-205ENST00000570659 RBM11P57052 281 aaKnown RBP5.28□□□□□ -1.56
SMG6-205ENST00000570659 PTGES3Q15185 160 aaKnown RBP5.28□□□□□ -1.56
SMG6-205ENST00000570659 TM4SF20Q53R12 229 aa5.28□□□□□ -1.56
SMG6-205ENST00000570659 C12orf73Q69YU5 71 aa5.28□□□□□ -1.56
SMG6-205ENST00000570659 SIGIRRQ6IA17 410 aa5.28□□□□□ -1.56
SMG6-205ENST00000570659 ZNF529Q6P280 563 aa5.28□□□□□ -1.56
SMG6-205ENST00000570659 FAHD1Q6P587 224 aa5.28□□□□□ -1.56
SMG6-205ENST00000570659 GAPTQ8N292 157 aa5.28□□□□□ -1.56
SMG6-205ENST00000570659 OR10H4Q8NGA5 316 aa5.28□□□□□ -1.56
SMG6-205ENST00000570659 FBLIM1Q8WUP2 373 aa5.28□□□□□ -1.56
SMG6-205ENST00000570659 TNFAIP8L1Q8WVP5 186 aa5.28□□□□□ -1.56
SMG6-205ENST00000570659 FAM46BQ96A09 425 aa5.28□□□□□ -1.56
SMG6-205ENST00000570659 RNF183Q96D59 192 aa5.28□□□□□ -1.56
SMG6-205ENST00000570659 C5orf30Q96GV9 206 aa5.28□□□□□ -1.56
SMG6-205ENST00000570659 ABHD14BQ96IU4 210 aa5.28□□□□□ -1.56
SMG6-205ENST00000570659 ABHD14AQ9BUJ0 271 aa5.28□□□□□ -1.56
SMG6-205ENST00000570659 TINAGL1Q9GZM7 467 aaPredicted RBP5.28□□□□□ -1.56
SMG6-205ENST00000570659 MED4Q9NPJ6 270 aa5.28□□□□□ -1.56
SMG6-205ENST00000570659 FAM118AQ9NWS6 357 aa5.28□□□□□ -1.56
SMG6-205ENST00000570659 SLC2A8Q9NY64 477 aa5.28□□□□□ -1.56
SMG6-205ENST00000570659 METTL1Q9UBP6 276 aaKnown RBP5.28□□□□□ -1.56
SMG6-205ENST00000570659 AASSQ9UDR5 926 aa5.28□□□□□ -1.56
SMG6-205ENST00000570659 GNG8Q9UK08 70 aa5.28□□□□□ -1.56
SMG6-205ENST00000570659 ST3GAL6Q9Y274 331 aa5.28□□□□□ -1.56
SMG6-205ENST00000570659 ERICH4A6NGS2 130 aa5.27□□□□□ -1.57
SMG6-205ENST00000570659 FAM90A23PA8MXZ1 464 aa5.27□□□□□ -1.57
SMG6-205ENST00000570659 TXNL1O43396 289 aa5.27□□□□□ -1.57
SMG6-205ENST00000570659 SNX3O60493 162 aa5.27□□□□□ -1.57
SMG6-205ENST00000570659 OR7C1O76099 320 aaPredicted RBP5.27□□□□□ -1.57
SMG6-205ENST00000570659 OR2C1O95371 312 aa5.27□□□□□ -1.57
SMG6-205ENST00000570659 IGHV3-23P01764 117 aa5.27□□□□□ -1.57
SMG6-205ENST00000570659 ISG15P05161 165 aa5.27□□□□□ -1.57
SMG6-205ENST00000570659 CRYGBP07316 175 aa5.27□□□□□ -1.57
SMG6-205ENST00000570659 UBCP0CG48 685 aaKnown RBP5.27□□□□□ -1.57
SMG6-205ENST00000570659 GZMHP20718 246 aa5.27□□□□□ -1.57
SMG6-205ENST00000570659 FXYD3Q14802 87 aa5.27□□□□□ -1.57
SMG6-205ENST00000570659 RPEL1Q2QD12 228 aa5.27□□□□□ -1.57
SMG6-205ENST00000570659 ODF3L2Q3SX64 289 aa5.27□□□□□ -1.57
SMG6-205ENST00000570659 ATAD3CQ5T2N8 411 aa5.27□□□□□ -1.57
SMG6-205ENST00000570659 DMKNQ6E0U4 476 aaPredicted RBP5.27□□□□□ -1.57
SMG6-205ENST00000570659 ZNF562Q6V9R5 426 aa5.27□□□□□ -1.57
SMG6-205ENST00000570659 LAX1Q8IWV1 398 aa5.27□□□□□ -1.57
SMG6-205ENST00000570659 DEFB107AQ8IZN7 70 aa5.27□□□□□ -1.57
SMG6-205ENST00000570659 Q8N1X5 172 aa5.27□□□□□ -1.57
SMG6-205ENST00000570659 TCTEX1D1Q8N7M0 179 aa5.27□□□□□ -1.57
SMG6-205ENST00000570659 ZNF383Q8NA42 475 aa5.27□□□□□ -1.57
SMG6-205ENST00000570659 PXT1Q8NFP0 134 aa5.27□□□□□ -1.57
SMG6-205ENST00000570659 OR13C3Q8NGS6 347 aa5.27□□□□□ -1.57
SMG6-205ENST00000570659 OR2K2Q8NGT1 345 aa5.27□□□□□ -1.57
SMG6-205ENST00000570659 TMEM163Q8TC26 289 aa5.27□□□□□ -1.57
SMG6-205ENST00000570659 C10orf35Q96D05 121 aa5.27□□□□□ -1.57
SMG6-205ENST00000570659 PELI1Q96FA3 418 aa5.27□□□□□ -1.57
SMG6-205ENST00000570659 ADI1Q9BV57 179 aa5.27□□□□□ -1.57
SMG6-205ENST00000570659 CCDC134Q9H6E4 229 aa5.27□□□□□ -1.57
SMG6-205ENST00000570659 SLA2Q9H6Q3 261 aa5.27□□□□□ -1.57
SMG6-205ENST00000570659 IFT22Q9H7X7 185 aa5.27□□□□□ -1.57
SMG6-205ENST00000570659 TAF9BQ9HBM6 251 aa5.27□□□□□ -1.57
SMG6-205ENST00000570659 AKIP1Q9NQ31 210 aa5.27□□□□□ -1.57
SMG6-205ENST00000570659 TAS2R4Q9NYW5 299 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms