RNA–Protein interactions for RNA: ENST00000569794.1

CHD9-220, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-220ENST00000569794 C14orf105Q9NVL8 296 aa3.31□□□□□ -1.88
CHD9-220ENST00000569794 SS18L2Q9UHA2 77 aa3.31□□□□□ -1.88
CHD9-220ENST00000569794 NUFIP1Q9UHK0 495 aaKnown RBP3.31□□□□□ -1.88
CHD9-220ENST00000569794 ANGPT4Q9Y264 503 aa3.31□□□□□ -1.88
CHD9-220ENST00000569794 SLC35A3Q9Y2D2 325 aa3.31□□□□□ -1.88
CHD9-220ENST00000569794 ZNF706Q9Y5V0 76 aaPredicted RBP3.31□□□□□ -1.88
CHD9-220ENST00000569794 KIF25-AS1Q9Y6Z4 181 aa3.31□□□□□ -1.88
CHD9-220ENST00000569794 HCFC1P51610 2035 aa3.31□□□□□ -1.88
CHD9-220ENST00000569794 CFAP43Q8NDM7 1665 aa3.3□□□□□ -1.88
CHD9-220ENST00000569794 CPDO75976 1380 aa3.3□□□□□ -1.88
CHD9-220ENST00000569794 CCL15-CCL14A0A0B4J2E2 113 aa3.3□□□□□ -1.88
CHD9-220ENST00000569794 A0A1B0GV50 99 aa3.3□□□□□ -1.88
CHD9-220ENST00000569794 EXOC1LA0A1B0GW35 172 aa3.3□□□□□ -1.88
CHD9-220ENST00000569794 LGALS9O00182 355 aa3.3□□□□□ -1.88
CHD9-220ENST00000569794 SLC37A4O43826 429 aa3.3□□□□□ -1.88
CHD9-220ENST00000569794 CD5LO43866 347 aa3.3□□□□□ -1.88
CHD9-220ENST00000569794 SS18L1O75177 396 aaPredicted RBP3.3□□□□□ -1.88
CHD9-220ENST00000569794 GCM2O75603 506 aaPredicted RBP3.3□□□□□ -1.88
CHD9-220ENST00000569794 TTRP02766 147 aa3.3□□□□□ -1.88
CHD9-220ENST00000569794 HSPB1P04792 205 aaKnown RBP3.3□□□□□ -1.88
CHD9-220ENST00000569794 SULT1A3P0DMM9 295 aa3.3□□□□□ -1.88
CHD9-220ENST00000569794 SULT1A4P0DMN0 295 aa3.3□□□□□ -1.88
CHD9-220ENST00000569794 OR12D1P0DN82 309 aa3.3□□□□□ -1.88
CHD9-220ENST00000569794 IFI30P13284 250 aa3.3□□□□□ -1.88
CHD9-220ENST00000569794 GABRA4P48169 554 aa3.3□□□□□ -1.88
CHD9-220ENST00000569794 FABP5Q01469 135 aa3.3□□□□□ -1.88
CHD9-220ENST00000569794 MPPED2Q15777 294 aa3.3□□□□□ -1.88
CHD9-220ENST00000569794 CCL15Q16663 113 aa3.3□□□□□ -1.88
CHD9-220ENST00000569794 TMEM183BQ1AE95 376 aa3.3□□□□□ -1.88
CHD9-220ENST00000569794 RSPO1Q2MKA7 263 aaPredicted RBP3.3□□□□□ -1.88
CHD9-220ENST00000569794 ALKAL1Q6UXT8 129 aa3.3□□□□□ -1.88
CHD9-220ENST00000569794 PP632Q6XCG6 107 aa3.3□□□□□ -1.88
CHD9-220ENST00000569794 TMPPEQ6ZT21 453 aa3.3□□□□□ -1.88
CHD9-220ENST00000569794 DEFB132Q7Z7B7 95 aa3.3□□□□□ -1.88
CHD9-220ENST00000569794 CAMK2N1Q7Z7J9 78 aa3.3□□□□□ -1.88
CHD9-220ENST00000569794 TMEM183AQ8IXX5 376 aa3.3□□□□□ -1.88
CHD9-220ENST00000569794 ZNF567Q8N184 647 aa3.3□□□□□ -1.88
CHD9-220ENST00000569794 ZIC4Q8N9L1 334 aa3.3□□□□□ -1.88
CHD9-220ENST00000569794 OR2M7Q8NG81 312 aa3.3□□□□□ -1.88
CHD9-220ENST00000569794 OR2T4Q8NH00 348 aa3.3□□□□□ -1.88
CHD9-220ENST00000569794 TMEM101Q96IK0 257 aa3.3□□□□□ -1.88
CHD9-220ENST00000569794 OR7D2Q96RA2 312 aa3.3□□□□□ -1.88
CHD9-220ENST00000569794 PAXXQ9BUH6 204 aa3.3□□□□□ -1.88
CHD9-220ENST00000569794 ABCG5Q9H222 651 aa3.3□□□□□ -1.88
CHD9-220ENST00000569794 RWDD2AQ9UIY3 292 aa3.3□□□□□ -1.88
CHD9-220ENST00000569794 CDK12Q9NYV4 1490 aaPredicted RBP3.29□□□□□ -1.88
CHD9-220ENST00000569794 SHANK2Q9UPX8 1470 aa3.29□□□□□ -1.88
CHD9-220ENST00000569794 RALGAPA1Q6GYQ0 2036 aa3.29□□□□□ -1.88
CHD9-220ENST00000569794 TRAPPC8Q9Y2L5 1435 aa3.29□□□□□ -1.88
CHD9-220ENST00000569794 FAAHO00519 579 aa3.29□□□□□ -1.88
CHD9-220ENST00000569794 ARPC5O15511 151 aa3.29□□□□□ -1.88
CHD9-220ENST00000569794 TCF21O43680 179 aa3.29□□□□□ -1.88
CHD9-220ENST00000569794 MT-CO2P00403 227 aa3.29□□□□□ -1.88
CHD9-220ENST00000569794 CRYGDP07320 174 aa3.29□□□□□ -1.88
CHD9-220ENST00000569794 SCGB1A1P11684 91 aa3.29□□□□□ -1.88
CHD9-220ENST00000569794 OMGP23515 440 aa3.29□□□□□ -1.88
CHD9-220ENST00000569794 IMPA1P29218 277 aa3.29□□□□□ -1.88
CHD9-220ENST00000569794 CXCL5P42830 114 aa3.29□□□□□ -1.88
CHD9-220ENST00000569794 UBE2AP49459 152 aa3.29□□□□□ -1.88
CHD9-220ENST00000569794 CTBP2P56545 445 aa3.29□□□□□ -1.88
CHD9-220ENST00000569794 RPS24P62847 133 aaKnown RBP3.29□□□□□ -1.88
CHD9-220ENST00000569794 RUNX1Q01196 453 aa3.29□□□□□ -1.88
CHD9-220ENST00000569794 TMEM267Q0VDI3 215 aaPredicted RBP3.29□□□□□ -1.88
CHD9-220ENST00000569794 MPV17L2Q567V2 206 aa3.29□□□□□ -1.88
CHD9-220ENST00000569794 LPCAT3Q6P1A2 487 aa3.29□□□□□ -1.88
CHD9-220ENST00000569794 SMARCD3Q6STE5 483 aa3.29□□□□□ -1.88
CHD9-220ENST00000569794 CYHR1Q6ZMK1 362 aa3.29□□□□□ -1.88
CHD9-220ENST00000569794 SHISA6Q6ZSJ9 500 aa3.29□□□□□ -1.88
CHD9-220ENST00000569794 FA2HQ7L5A8 372 aa3.29□□□□□ -1.88
CHD9-220ENST00000569794 GRINAQ7Z429 371 aa3.29□□□□□ -1.88
CHD9-220ENST00000569794 ZBTB8OSQ8IWT0 167 aa3.29□□□□□ -1.88
CHD9-220ENST00000569794 C20orf196Q8IYI0 205 aa3.29□□□□□ -1.88
CHD9-220ENST00000569794 EIF4E3Q8N5X7 224 aaKnown RBP3.29□□□□□ -1.88
CHD9-220ENST00000569794 ZNF439Q8NDP4 499 aa3.29□□□□□ -1.88
CHD9-220ENST00000569794 KLHL30-AS1Q8NEE0 82 aa3.29□□□□□ -1.88
CHD9-220ENST00000569794 OR10G4Q8NGN3 311 aa3.29□□□□□ -1.88
CHD9-220ENST00000569794 APOBEC3DQ96AK3 386 aaPredicted RBP3.29□□□□□ -1.88
CHD9-220ENST00000569794 SLC25A44Q96H78 314 aaPredicted RBP3.29□□□□□ -1.88
CHD9-220ENST00000569794 OLFM3Q96PB7 478 aa3.29□□□□□ -1.88
CHD9-220ENST00000569794 TSC22D3Q99576 134 aa3.29□□□□□ -1.88
CHD9-220ENST00000569794 ZNF649Q9BS31 505 aa3.29□□□□□ -1.88
CHD9-220ENST00000569794 HDHD3Q9BSH5 251 aaPredicted RBP3.29□□□□□ -1.88
CHD9-220ENST00000569794 GGTLC1Q9BX51 225 aa3.29□□□□□ -1.88
CHD9-220ENST00000569794 LINC00527Q9UJ94 153 aa3.29□□□□□ -1.88
CHD9-220ENST00000569794 PYCARDQ9ULZ3 195 aa3.29□□□□□ -1.88
CHD9-220ENST00000569794 WASHC3Q9Y3C0 194 aa3.29□□□□□ -1.88
CHD9-220ENST00000569794 HSPB11Q9Y547 144 aa3.29□□□□□ -1.88
CHD9-220ENST00000569794 OR51B4Q9Y5P0 310 aa3.29□□□□□ -1.88
CHD9-220ENST00000569794 FAM135BQ49AJ0 1406 aa3.28□□□□□ -1.88
CHD9-220ENST00000569794 UACAQ9BZF9 1416 aa3.28□□□□□ -1.88
CHD9-220ENST00000569794 KIF15Q9NS87 1388 aa3.28□□□□□ -1.88
CHD9-220ENST00000569794 LRRK1Q38SD2 2015 aa3.28□□□□□ -1.88
CHD9-220ENST00000569794 LOC102724200A0A096LPH7 203 aaPredicted RBP3.28□□□□□ -1.88
CHD9-220ENST00000569794 TRAV8-1A0A0A6YYK1 113 aa3.28□□□□□ -1.88
CHD9-220ENST00000569794 FAM236DA0A1B0GTK5 79 aa3.28□□□□□ -1.88
CHD9-220ENST00000569794 ZNF850A8MQ14 1090 aa3.28□□□□□ -1.88
CHD9-220ENST00000569794 B4DEV8 164 aa3.28□□□□□ -1.88
CHD9-220ENST00000569794 INS-IGF2F8WCM5 200 aa3.28□□□□□ -1.88
CHD9-220ENST00000569794 MRASO14807 208 aa3.28□□□□□ -1.88
CHD9-220ENST00000569794 RGS5O15539 181 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms