RNA–Protein interactions for RNA: ENST00000567992.1

CLK3-220, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 603 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-220ENST00000567992 ETV7Q9Y603 341 aa7.85□□□□□ -1.15
CLK3-220ENST00000567992 A0A075B6Q4 140 aa7.84□□□□□ -1.15
CLK3-220ENST00000567992 METTL21EPA6NDL7 271 aa7.84□□□□□ -1.15
CLK3-220ENST00000567992 SERPINE3A8MV23 424 aa7.84□□□□□ -1.15
CLK3-220ENST00000567992 YPEL1O60688 119 aa7.84□□□□□ -1.15
CLK3-220ENST00000567992 GABARAPO95166 117 aa7.84□□□□□ -1.15
CLK3-220ENST00000567992 FCGR3AP08637 254 aa7.84□□□□□ -1.15
CLK3-220ENST00000567992 SCTP09683 121 aa7.84□□□□□ -1.15
CLK3-220ENST00000567992 REG1BP48304 166 aa7.84□□□□□ -1.15
CLK3-220ENST00000567992 RAB7AP51149 207 aa7.84□□□□□ -1.15
CLK3-220ENST00000567992 TMBIM6P55061 237 aa7.84□□□□□ -1.15
CLK3-220ENST00000567992 CTF1Q16619 201 aa7.84□□□□□ -1.15
CLK3-220ENST00000567992 STEAP3Q658P3 488 aa7.84□□□□□ -1.15
CLK3-220ENST00000567992 CCDC144NLQ6NUI1 221 aa7.84□□□□□ -1.15
CLK3-220ENST00000567992 CLVS1Q8IUQ0 354 aaPredicted RBP7.84□□□□□ -1.15
CLK3-220ENST00000567992 OR8H3Q8N146 312 aa7.84□□□□□ -1.15
CLK3-220ENST00000567992 C3orf56Q8N813 242 aa7.84□□□□□ -1.15
CLK3-220ENST00000567992 OR56B4Q8NH76 319 aa7.84□□□□□ -1.15
CLK3-220ENST00000567992 RTN4IP1Q8WWV3 396 aaPredicted RBP7.84□□□□□ -1.15
CLK3-220ENST00000567992 GALMQ96C23 342 aa7.84□□□□□ -1.15
CLK3-220ENST00000567992 YPEL2Q96QA6 119 aa7.84□□□□□ -1.15
CLK3-220ENST00000567992 ABHD14AQ9BUJ0 271 aa7.84□□□□□ -1.15
CLK3-220ENST00000567992 ATG5Q9H1Y0 275 aa7.84□□□□□ -1.15
CLK3-220ENST00000567992 IFI27L2Q9H2X8 130 aa7.84□□□□□ -1.15
CLK3-220ENST00000567992 RANBP3Q9H6Z4 567 aaPredicted RBP7.84□□□□□ -1.15
CLK3-220ENST00000567992 ZNF702PQ9H963 129 aa7.84□□□□□ -1.15
CLK3-220ENST00000567992 BEX1Q9HBH7 125 aa7.84□□□□□ -1.15
CLK3-220ENST00000567992 OR1A1Q9P1Q5 309 aa7.84□□□□□ -1.15
CLK3-220ENST00000567992 SIGLEC9Q9Y336 463 aa7.84□□□□□ -1.15
CLK3-220ENST00000567992 IGKV1D-8A0A087WSZ0 117 aa7.83□□□□□ -1.16
CLK3-220ENST00000567992 IGHV1-3A0A0C4DH29 117 aa7.83□□□□□ -1.16
CLK3-220ENST00000567992 A0A1B0GUS0 222 aa7.83□□□□□ -1.16
CLK3-220ENST00000567992 TMEM127O75204 238 aa7.83□□□□□ -1.16
CLK3-220ENST00000567992 OR2F2O95006 317 aa7.83□□□□□ -1.16
CLK3-220ENST00000567992 AMY1AP04745 511 aa7.83□□□□□ -1.16
CLK3-220ENST00000567992 AMY2AP04746 511 aa7.83□□□□□ -1.16
CLK3-220ENST00000567992 SNRNP70P08621 437 aaKnown RBP7.83□□□□□ -1.16
CLK3-220ENST00000567992 CD3GP09693 182 aa7.83□□□□□ -1.16
CLK3-220ENST00000567992 BRS3P32247 399 aa7.83□□□□□ -1.16
CLK3-220ENST00000567992 MNDAP41218 407 aa7.83□□□□□ -1.16
CLK3-220ENST00000567992 KIR2DS4P43632 304 aa7.83□□□□□ -1.16
CLK3-220ENST00000567992 SERPINB10P48595 397 aa7.83□□□□□ -1.16
CLK3-220ENST00000567992 VBP1P61758 197 aa7.83□□□□□ -1.16
CLK3-220ENST00000567992 BLCAPP62952 87 aa7.83□□□□□ -1.16
CLK3-220ENST00000567992 SRSF4Q08170 494 aaKnown RBP7.83□□□□□ -1.16
CLK3-220ENST00000567992 ZNF260Q3ZCT1 412 aa7.83□□□□□ -1.16
CLK3-220ENST00000567992 Q6ZS46 218 aa7.83□□□□□ -1.16
CLK3-220ENST00000567992 THNSL2Q86YJ6 484 aa7.83□□□□□ -1.16
CLK3-220ENST00000567992 ANKRD13BQ86YJ7 626 aa7.83□□□□□ -1.16
CLK3-220ENST00000567992 CROCCP3Q8IVE0 287 aa7.83□□□□□ -1.16
CLK3-220ENST00000567992 IZUMO1Q8IYV9 350 aa7.83□□□□□ -1.16
CLK3-220ENST00000567992 Q8N2B8 174 aa7.83□□□□□ -1.16
CLK3-220ENST00000567992 Q8N6K4 173 aa7.83□□□□□ -1.16
CLK3-220ENST00000567992 OR4C13Q8NGP0 309 aa7.83□□□□□ -1.16
CLK3-220ENST00000567992 IL1F10Q8WWZ1 152 aa7.83□□□□□ -1.16
CLK3-220ENST00000567992 MAFIPQ8WZ33 124 aa7.83□□□□□ -1.16
CLK3-220ENST00000567992 SLC25A46Q96AG3 418 aa7.83□□□□□ -1.16
CLK3-220ENST00000567992 RBMXL1Q96E39 390 aaKnown RBP7.83□□□□□ -1.16
CLK3-220ENST00000567992 NPFFR1Q9GZQ6 430 aa7.83□□□□□ -1.16
CLK3-220ENST00000567992 TOLLIPQ9H0E2 274 aa7.83□□□□□ -1.16
CLK3-220ENST00000567992 ABRACLQ9P1F3 81 aa7.83□□□□□ -1.16
CLK3-220ENST00000567992 ZNF230Q9UIE0 474 aaPredicted RBP7.83□□□□□ -1.16
CLK3-220ENST00000567992 PITPNC1Q9UKF7 332 aa7.83□□□□□ -1.16
CLK3-220ENST00000567992 MGAT4AQ9UM21 535 aa7.83□□□□□ -1.16
CLK3-220ENST00000567992 SPATA2Q9UM82 520 aa7.83□□□□□ -1.16
CLK3-220ENST00000567992 RNF114Q9Y508 228 aa7.83□□□□□ -1.16
CLK3-220ENST00000567992 SAA2-SAA4A0A096LPE2 208 aa7.82□□□□□ -1.16
CLK3-220ENST00000567992 TMEM235A6NFC5 223 aa7.82□□□□□ -1.16
CLK3-220ENST00000567992 ZNF736B4DX44 427 aaPredicted RBP7.82□□□□□ -1.16
CLK3-220ENST00000567992 TRDCB7Z8K6 153 aa7.82□□□□□ -1.16
CLK3-220ENST00000567992 H3BMQ9 156 aa7.82□□□□□ -1.16
CLK3-220ENST00000567992 ITGB1BP1O14713 200 aa7.82□□□□□ -1.16
CLK3-220ENST00000567992 ST8SIA5O15466 376 aa7.82□□□□□ -1.16
CLK3-220ENST00000567992 FABP7O15540 132 aa7.82□□□□□ -1.16
CLK3-220ENST00000567992 SSX5O60225 188 aa7.82□□□□□ -1.16
CLK3-220ENST00000567992 GAPDHP04406 335 aaKnown RBP7.82□□□□□ -1.16
CLK3-220ENST00000567992 GSTP1P09211 210 aaKnown RBP7.82□□□□□ -1.16
CLK3-220ENST00000567992 SAA2P0DJI9 122 aaPredicted RBP7.82□□□□□ -1.16
CLK3-220ENST00000567992 IL3RAP26951 378 aa7.82□□□□□ -1.16
CLK3-220ENST00000567992 OR3A3P47888 321 aa7.82□□□□□ -1.16
CLK3-220ENST00000567992 ARHGDIBP52566 201 aa7.82□□□□□ -1.16
CLK3-220ENST00000567992 DCTN2Q13561 401 aaKnown RBP7.82□□□□□ -1.16
CLK3-220ENST00000567992 EBI3Q14213 229 aa7.82□□□□□ -1.16
CLK3-220ENST00000567992 SRSF7Q16629 238 aaKnown RBP eCLIP7.82□□□□□ -1.16
CLK3-220ENST00000567992 CDNFQ49AH0 187 aa7.82□□□□□ -1.16
CLK3-220ENST00000567992 HACD4Q5VWC8 232 aa7.82□□□□□ -1.16
CLK3-220ENST00000567992 Q6ZS49 121 aa7.82□□□□□ -1.16
CLK3-220ENST00000567992 ZNF833PQ6ZTB9 187 aa7.82□□□□□ -1.16
CLK3-220ENST00000567992 C16orf82Q7Z2V1 217 aa7.82□□□□□ -1.16
CLK3-220ENST00000567992 LYG1Q8N1E2 194 aa7.82□□□□□ -1.16
CLK3-220ENST00000567992 OR2AK2Q8NG84 335 aa7.82□□□□□ -1.16
CLK3-220ENST00000567992 NUDCD2Q8WVJ2 157 aa7.82□□□□□ -1.16
CLK3-220ENST00000567992 RBM14Q96PK6 669 aaKnown RBP7.82□□□□□ -1.16
CLK3-220ENST00000567992 CITED1Q99966 193 aa7.82□□□□□ -1.16
CLK3-220ENST00000567992 BCL7BQ9BQE9 202 aa7.82□□□□□ -1.16
CLK3-220ENST00000567992 ZNF251Q9BRH9 671 aa7.82□□□□□ -1.16
CLK3-220ENST00000567992 AGMATQ9BSE5 352 aa7.82□□□□□ -1.16
CLK3-220ENST00000567992 SLC25A33Q9BSK2 321 aa7.82□□□□□ -1.16
CLK3-220ENST00000567992 CABLES2Q9BTV7 478 aa7.82□□□□□ -1.16
CLK3-220ENST00000567992 SERTAD4Q9NUC0 356 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms