RNA–Protein interactions for RNA: ENST00000567737.1

SMG1-213, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, human

TSL 3

Gene SMG1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMG1-213	ENST00000567737	TRIM25	Q14258	630 aa	Known RBP	10.25	□□□□□ -0.77
SMG1-213	ENST00000567737	ZSCAN26	Q16670	478 aa		10.25	□□□□□ -0.77
SMG1-213	ENST00000567737	PIGY	Q3MUY2	71 aa		10.25	□□□□□ -0.77
SMG1-213	ENST00000567737	TMEM244	Q5VVB8	128 aa		10.25	□□□□□ -0.77
SMG1-213	ENST00000567737	TMEM236	Q5W0B7	351 aa		10.25	□□□□□ -0.77
SMG1-213	ENST00000567737	ZNF562	Q6V9R5	426 aa		10.25	□□□□□ -0.77
SMG1-213	ENST00000567737	SSX6	Q7RTT6	188 aa		10.25	□□□□□ -0.77
SMG1-213	ENST00000567737	PRSS35	Q8N3Z0	413 aa		10.25	□□□□□ -0.77
SMG1-213	ENST00000567737	PRR18	Q8N4B5	295 aa		10.25	□□□□□ -0.77
SMG1-213	ENST00000567737	OR5T1	Q8NG75	326 aa		10.25	□□□□□ -0.77
SMG1-213	ENST00000567737	TBX5	Q99593	518 aa		10.25	□□□□□ -0.77
SMG1-213	ENST00000567737	TECR	Q9NZ01	308 aa	Known RBP	10.25	□□□□□ -0.77
SMG1-213	ENST00000567737	METTL15	A6NJ78	407 aa		10.24	□□□□□ -0.77
SMG1-213	ENST00000567737	AIP	O00170	330 aa		10.24	□□□□□ -0.77
SMG1-213	ENST00000567737	CA2	P00918	260 aa		10.24	□□□□□ -0.77
SMG1-213	ENST00000567737	OSM	P13725	252 aa		10.24	□□□□□ -0.77
SMG1-213	ENST00000567737	NANOS2	P60321	138 aa	Known RBP	10.24	□□□□□ -0.77
SMG1-213	ENST00000567737	KISS1	Q15726	138 aa		10.24	□□□□□ -0.77
SMG1-213	ENST00000567737	TMEM177	Q53S58	311 aa		10.24	□□□□□ -0.77
SMG1-213	ENST00000567737	C11orf45	Q8TAV5	145 aa		10.24	□□□□□ -0.77
SMG1-213	ENST00000567737	NEK7	Q8TDX7	302 aa		10.24	□□□□□ -0.77
SMG1-213	ENST00000567737	ABHD14A	Q9BUJ0	271 aa		10.24	□□□□□ -0.77
SMG1-213	ENST00000567737	H2AFY2	Q9P0M6	372 aa	Predicted RBP	10.24	□□□□□ -0.77
SMG1-213	ENST00000567737	FBXL7	Q9UJT9	491 aa		10.24	□□□□□ -0.77
SMG1-213	ENST00000567737	APLN	Q9ULZ1	77 aa		10.24	□□□□□ -0.77
SMG1-213	ENST00000567737	OR7C1	O76099	320 aa	Predicted RBP	10.23	□□□□□ -0.77
SMG1-213	ENST00000567737	DEFA5	Q01523	94 aa		10.23	□□□□□ -0.77
SMG1-213	ENST00000567737	GK3P	Q14409	553 aa		10.23	□□□□□ -0.77
SMG1-213	ENST00000567737	ANKRD55	Q3KP44	614 aa		10.23	□□□□□ -0.77
SMG1-213	ENST00000567737	PXT1	Q8NFP0	134 aa		10.23	□□□□□ -0.77
SMG1-213	ENST00000567737	OR10AC1	Q8NH08	325 aa		10.23	□□□□□ -0.77
SMG1-213	ENST00000567737	GRPEL2	Q8TAA5	225 aa		10.23	□□□□□ -0.77
SMG1-213	ENST00000567737	MRPS24	Q96EL2	167 aa	Known RBP	10.23	□□□□□ -0.77
SMG1-213	ENST00000567737	USMG5	Q96IX5	58 aa		10.23	□□□□□ -0.77
SMG1-213	ENST00000567737	ZNF556	Q9HAH1	456 aa		10.23	□□□□□ -0.77
SMG1-213	ENST00000567737	FGFR1OP2	Q9NVK5	253 aa		10.23	□□□□□ -0.77
SMG1-213	ENST00000567737	DNAH17	Q9UFH2	4485 aa		10.23	□□□□□ -0.77
SMG1-213	ENST00000567737	IGLL5	B9A064	214 aa		10.22	□□□□□ -0.77
SMG1-213	ENST00000567737	CCDC22	O60826	627 aa		10.22	□□□□□ -0.77
SMG1-213	ENST00000567737	SULT1C4	O75897	302 aa		10.22	□□□□□ -0.77
SMG1-213	ENST00000567737	CDK2AP2	O75956	126 aa		10.22	□□□□□ -0.77
SMG1-213	ENST00000567737	FOLR2	P14207	255 aa		10.22	□□□□□ -0.77
SMG1-213	ENST00000567737	CTRB1	P17538	263 aa		10.22	□□□□□ -0.77
SMG1-213	ENST00000567737	RSU1	Q15404	277 aa		10.22	□□□□□ -0.77
SMG1-213	ENST00000567737	ZNF691	Q5VV52	312 aa		10.22	□□□□□ -0.77
SMG1-213	ENST00000567737	CTRB2	Q6GPI1	263 aa		10.22	□□□□□ -0.77
SMG1-213	ENST00000567737	CGB2	Q6NT52	195 aa		10.22	□□□□□ -0.77
SMG1-213	ENST00000567737	FAM131A	Q6UXB0	335 aa		10.22	□□□□□ -0.77
SMG1-213	ENST00000567737	ZNF833P	Q6ZTB9	187 aa		10.22	□□□□□ -0.77
SMG1-213	ENST00000567737	ODF3L1	Q8IXM7	274 aa		10.22	□□□□□ -0.77
SMG1-213	ENST00000567737	STX19	Q8N4C7	294 aa		10.22	□□□□□ -0.77
SMG1-213	ENST00000567737	STPG3	Q8N7X2	389 aa		10.22	□□□□□ -0.77
SMG1-213	ENST00000567737	OR13C3	Q8NGS6	347 aa		10.22	□□□□□ -0.77
SMG1-213	ENST00000567737	OR10K1	Q8NGX5	313 aa		10.22	□□□□□ -0.77
SMG1-213	ENST00000567737	CMTM5	Q96DZ9	223 aa		10.22	□□□□□ -0.77
SMG1-213	ENST00000567737	PARP12	Q9H0J9	701 aa	Known RBP	10.22	□□□□□ -0.77
SMG1-213	ENST00000567737	IFT22	Q9H7X7	185 aa		10.22	□□□□□ -0.77
SMG1-213	ENST00000567737	OR2S2	Q9NQN1	319 aa		10.22	□□□□□ -0.77
SMG1-213	ENST00000567737	ZNF581	Q9P0T4	197 aa		10.22	□□□□□ -0.77
SMG1-213	ENST00000567737	METTL1	Q9UBP6	276 aa	Known RBP	10.22	□□□□□ -0.77
SMG1-213	ENST00000567737	TRAPPC2L	Q9UL33	140 aa		10.22	□□□□□ -0.77
SMG1-213	ENST00000567737	SLC22A1	O15245	554 aa		10.21	□□□□□ -0.77
SMG1-213	ENST00000567737	HTR3B	O95264	441 aa		10.21	□□□□□ -0.77
SMG1-213	ENST00000567737	HBZ	P02008	142 aa		10.21	□□□□□ -0.77
SMG1-213	ENST00000567737	MT-ND4	P03905	459 aa		10.21	□□□□□ -0.77
SMG1-213	ENST00000567737	FXYD3	Q14802	87 aa		10.21	□□□□□ -0.77
SMG1-213	ENST00000567737	MORN2	Q502X0	79 aa		10.21	□□□□□ -0.77
SMG1-213	ENST00000567737	ATAD3C	Q5T2N8	411 aa		10.21	□□□□□ -0.77
SMG1-213	ENST00000567737	C6orf183	Q5T699	404 aa		10.21	□□□□□ -0.77
SMG1-213	ENST00000567737	CYP2R1	Q6VVX0	501 aa		10.21	□□□□□ -0.77
SMG1-213	ENST00000567737	ZNF497	Q6ZNH5	498 aa		10.21	□□□□□ -0.77
SMG1-213	ENST00000567737	FAM220A	Q7Z4H9	259 aa		10.21	□□□□□ -0.77
SMG1-213	ENST00000567737	BCDIN3D	Q7Z5W3	292 aa	Known RBP	10.21	□□□□□ -0.77
SMG1-213	ENST00000567737	KCTD20	Q7Z5Y7	419 aa		10.21	□□□□□ -0.77
SMG1-213	ENST00000567737	OR1L1	Q8NH94	360 aa		10.21	□□□□□ -0.77
SMG1-213	ENST00000567737	GHSR	Q92847	366 aa		10.21	□□□□□ -0.77
SMG1-213	ENST00000567737	CPNE2	Q96FN4	548 aa	Predicted RBP	10.21	□□□□□ -0.77
SMG1-213	ENST00000567737	TINAGL1	Q9GZM7	467 aa	Predicted RBP	10.21	□□□□□ -0.77
SMG1-213	ENST00000567737	MAGIX	Q9H6Y5	334 aa		10.21	□□□□□ -0.77
SMG1-213	ENST00000567737	ING4	Q9UNL4	249 aa		10.21	□□□□□ -0.77
SMG1-213	ENST00000567737	ST3GAL6	Q9Y274	331 aa		10.21	□□□□□ -0.77
SMG1-213	ENST00000567737	TMA7	Q9Y2S6	64 aa	Known RBP	10.21	□□□□□ -0.77
SMG1-213	ENST00000567737		A0A1W2PQL4	384 aa	Predicted RBP	10.2	□□□□□ -0.78
SMG1-213	ENST00000567737	C2orf70	A6NJV1	201 aa		10.2	□□□□□ -0.78
SMG1-213	ENST00000567737	FADS2	O95864	444 aa	Known RBP	10.2	□□□□□ -0.78
SMG1-213	ENST00000567737	ISG15	P05161	165 aa		10.2	□□□□□ -0.78
SMG1-213	ENST00000567737	OR3A3	P47888	321 aa		10.2	□□□□□ -0.78
SMG1-213	ENST00000567737	LGALS7	P47929	136 aa		10.2	□□□□□ -0.78
SMG1-213	ENST00000567737	RPS16	P62249	146 aa	Known RBP	10.2	□□□□□ -0.78
SMG1-213	ENST00000567737	PKD1	P98161	4303 aa		10.2	□□□□□ -0.78
SMG1-213	ENST00000567737	ALKBH1	Q13686	389 aa	Known RBP	10.2	□□□□□ -0.78
SMG1-213	ENST00000567737	TM4SF20	Q53R12	229 aa		10.2	□□□□□ -0.78
SMG1-213	ENST00000567737	SYT6	Q5T7P8	510 aa	Predicted RBP	10.2	□□□□□ -0.78
SMG1-213	ENST00000567737	ZNF57	Q68EA5	555 aa	Predicted RBP	10.2	□□□□□ -0.78
SMG1-213	ENST00000567737	TMEM61	Q8N0U2	210 aa		10.2	□□□□□ -0.78
SMG1-213	ENST00000567737		Q8N1X5	172 aa		10.2	□□□□□ -0.78
SMG1-213	ENST00000567737	TNFAIP8L1	Q8WVP5	186 aa		10.2	□□□□□ -0.78
SMG1-213	ENST00000567737	THRSP	Q92748	146 aa		10.2	□□□□□ -0.78
SMG1-213	ENST00000567737	GPER1	Q99527	375 aa		10.2	□□□□□ -0.78
SMG1-213	ENST00000567737	FAM192A	Q9GZU8	254 aa		10.2	□□□□□ -0.78

Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms