RNA–Protein interactions for RNA: ENST00000567654.1

SF3B3-210, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 334 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-210ENST00000567654 IGLV2-14P01704 120 aa4.75□□□□□ -1.65
SF3B3-210ENST00000567654 CD55P08174 381 aa4.75□□□□□ -1.65
SF3B3-210ENST00000567654 OR5AC1P0C628 307 aa4.75□□□□□ -1.65
SF3B3-210ENST00000567654 RNF224P0DH78 156 aa4.75□□□□□ -1.65
SF3B3-210ENST00000567654 SFTPCP11686 197 aa4.75□□□□□ -1.65
SF3B3-210ENST00000567654 HLA-GP17693 338 aa4.75□□□□□ -1.65
SF3B3-210ENST00000567654 ERP29P30040 261 aaKnown RBP4.75□□□□□ -1.65
SF3B3-210ENST00000567654 SSTR2P30874 369 aa4.75□□□□□ -1.65
SF3B3-210ENST00000567654 GNRHRP30968 328 aa4.75□□□□□ -1.65
SF3B3-210ENST00000567654 PRDX2P32119 198 aa4.75□□□□□ -1.65
SF3B3-210ENST00000567654 SSTR5P35346 364 aa4.75□□□□□ -1.65
SF3B3-210ENST00000567654 SERPINF1P36955 418 aa4.75□□□□□ -1.65
SF3B3-210ENST00000567654 CFHR2P36980 270 aa4.75□□□□□ -1.65
SF3B3-210ENST00000567654 MDH2P40926 338 aaKnown RBP4.75□□□□□ -1.65
SF3B3-210ENST00000567654 GABRA2P47869 451 aa4.75□□□□□ -1.65
SF3B3-210ENST00000567654 UCP3P55916 312 aa4.75□□□□□ -1.65
SF3B3-210ENST00000567654 CCL8P80075 99 aa4.75□□□□□ -1.65
SF3B3-210ENST00000567654 SORDQ00796 357 aa4.75□□□□□ -1.65
SF3B3-210ENST00000567654 SRSF4Q08170 494 aaKnown RBP4.75□□□□□ -1.65
SF3B3-210ENST00000567654 RBM39Q14498 530 aaKnown RBP4.75□□□□□ -1.65
SF3B3-210ENST00000567654 TMEM187Q14656 261 aa4.75□□□□□ -1.65
SF3B3-210ENST00000567654 GNMTQ14749 295 aa4.75□□□□□ -1.65
SF3B3-210ENST00000567654 SURF2Q15527 256 aaPredicted RBP4.75□□□□□ -1.65
SF3B3-210ENST00000567654 SMIM21Q3B7S5 101 aa4.75□□□□□ -1.65
SF3B3-210ENST00000567654 SP6Q3SY56 376 aa4.75□□□□□ -1.65
SF3B3-210ENST00000567654 TMEM128Q5BJH2 165 aa4.75□□□□□ -1.65
SF3B3-210ENST00000567654 STUMQ69YW2 141 aa4.75□□□□□ -1.65
SF3B3-210ENST00000567654 SLC35E4Q6ICL7 350 aa4.75□□□□□ -1.65
SF3B3-210ENST00000567654 FAHD2BQ6P2I3 314 aaPredicted RBP4.75□□□□□ -1.65
SF3B3-210ENST00000567654 ZNF818PQ6ZRF7 136 aa4.75□□□□□ -1.65
SF3B3-210ENST00000567654 TCF23Q7RTU1 214 aa4.75□□□□□ -1.65
SF3B3-210ENST00000567654 H1FOOQ8IZA3 346 aaPredicted RBP4.75□□□□□ -1.65
SF3B3-210ENST00000567654 ASCC1Q8N9N2 400 aaKnown RBP4.75□□□□□ -1.65
SF3B3-210ENST00000567654 ZNRF1Q8ND25 227 aa4.75□□□□□ -1.65
SF3B3-210ENST00000567654 OR52L2PQ8NGH6 319 aa4.75□□□□□ -1.65
SF3B3-210ENST00000567654 OR4A4PQ8NGN8 299 aa4.75□□□□□ -1.65
SF3B3-210ENST00000567654 OR13A1Q8NGR1 328 aa4.75□□□□□ -1.65
SF3B3-210ENST00000567654 ANGPTL6Q8NI99 470 aa4.75□□□□□ -1.65
SF3B3-210ENST00000567654 FAM222BQ8WU58 562 aa4.75□□□□□ -1.65
SF3B3-210ENST00000567654 SECTM1Q8WVN6 248 aa4.75□□□□□ -1.65
SF3B3-210ENST00000567654 FAHD2AQ96GK7 314 aa4.75□□□□□ -1.65
SF3B3-210ENST00000567654 OR10C1Q96KK4 312 aa4.75□□□□□ -1.65
SF3B3-210ENST00000567654 HYLS1Q96M11 299 aa4.75□□□□□ -1.65
SF3B3-210ENST00000567654 BBC3Q96PG8 261 aaPredicted RBP4.75□□□□□ -1.65
SF3B3-210ENST00000567654 GAFA1Q96PS6 74 aa4.75□□□□□ -1.65
SF3B3-210ENST00000567654 TP53RKQ96S44 253 aa4.75□□□□□ -1.65
SF3B3-210ENST00000567654 TMEM246Q9BRR3 403 aa4.75□□□□□ -1.65
SF3B3-210ENST00000567654 TRAF4Q9BUZ4 470 aaPredicted RBP4.75□□□□□ -1.65
SF3B3-210ENST00000567654 ESRP2Q9H6T0 727 aaKnown RBP4.75□□□□□ -1.65
SF3B3-210ENST00000567654 NAA60Q9H7X0 242 aa4.75□□□□□ -1.65
SF3B3-210ENST00000567654 HEXA-AS1Q9H8Q6 139 aa4.75□□□□□ -1.65
SF3B3-210ENST00000567654 TAF9BQ9HBM6 251 aa4.75□□□□□ -1.65
SF3B3-210ENST00000567654 CCL28Q9NRJ3 127 aa4.75□□□□□ -1.65
SF3B3-210ENST00000567654 SLC2A9Q9NRM0 540 aa4.75□□□□□ -1.65
SF3B3-210ENST00000567654 COQ3Q9NZJ6 369 aa4.75□□□□□ -1.65
SF3B3-210ENST00000567654 ERRFI1Q9UJM3 462 aaPredicted RBP4.75□□□□□ -1.65
SF3B3-210ENST00000567654 C14orf166Q9Y224 244 aaKnown RBP4.75□□□□□ -1.65
SF3B3-210ENST00000567654 HSPB11Q9Y547 144 aa4.75□□□□□ -1.65
SF3B3-210ENST00000567654 ACACBO00763 2458 aa4.75□□□□□ -1.65
SF3B3-210ENST00000567654 IGHV3-43A0A0B4J1X8 118 aa4.74□□□□□ -1.65
SF3B3-210ENST00000567654 A0A0B4J2A0 478 aa4.74□□□□□ -1.65
SF3B3-210ENST00000567654 KIR2DS1A0A191URI9 304 aa4.74□□□□□ -1.65
SF3B3-210ENST00000567654 TMEM30CPA0ZSE6 113 aa4.74□□□□□ -1.65
SF3B3-210ENST00000567654 MARCH11A6NNE9 402 aa4.74□□□□□ -1.65
SF3B3-210ENST00000567654 FAM25EA8MYX2 175 aa4.74□□□□□ -1.65
SF3B3-210ENST00000567654 NPIPB11E5RHQ5 1161 aa4.74□□□□□ -1.65
SF3B3-210ENST00000567654 H0YIZ8 118 aa4.74□□□□□ -1.65
SF3B3-210ENST00000567654 C15orf65H3BRN8 121 aa4.74□□□□□ -1.65
SF3B3-210ENST00000567654 IFNL4K9M1U5 179 aa4.74□□□□□ -1.65
SF3B3-210ENST00000567654 KCNAB3O43448 404 aa4.74□□□□□ -1.65
SF3B3-210ENST00000567654 TNFSF12O43508 249 aa4.74□□□□□ -1.65
SF3B3-210ENST00000567654 SPDEFO95238 335 aa4.74□□□□□ -1.65
SF3B3-210ENST00000567654 MPC2O95563 127 aa4.74□□□□□ -1.65
SF3B3-210ENST00000567654 CD8AP01732 235 aa4.74□□□□□ -1.65
SF3B3-210ENST00000567654 GYPAP02724 150 aa4.74□□□□□ -1.65
SF3B3-210ENST00000567654 PRB1P04280 392 aa4.74□□□□□ -1.65
SF3B3-210ENST00000567654 ADH4P08319 380 aa4.74□□□□□ -1.65
SF3B3-210ENST00000567654 HOXB5P09067 269 aa4.74□□□□□ -1.65
SF3B3-210ENST00000567654 IGHV3-43DP0DP04 118 aa4.74□□□□□ -1.65
SF3B3-210ENST00000567654 GLP1RP43220 463 aa4.74□□□□□ -1.65
SF3B3-210ENST00000567654 KIR2DS4P43632 304 aa4.74□□□□□ -1.65
SF3B3-210ENST00000567654 HERV-K104P61576 105 aa4.74□□□□□ -1.65
SF3B3-210ENST00000567654 MZT1Q08AG7 82 aa4.74□□□□□ -1.65
SF3B3-210ENST00000567654 EDDM3AQ14507 147 aa4.74□□□□□ -1.65
SF3B3-210ENST00000567654 KIR2DS1Q14954 304 aa4.74□□□□□ -1.65
SF3B3-210ENST00000567654 LRRC37A5PQ49AS3 106 aa4.74□□□□□ -1.65
SF3B3-210ENST00000567654 KHDC1LQ5JSQ8 128 aa4.74□□□□□ -1.65
SF3B3-210ENST00000567654 KRBOX4Q5JUW0 171 aa4.74□□□□□ -1.65
SF3B3-210ENST00000567654 C11orf88Q6PI97 169 aa4.74□□□□□ -1.65
SF3B3-210ENST00000567654 FIP1L1Q6UN15 594 aaKnown RBP4.74□□□□□ -1.65
SF3B3-210ENST00000567654 TBC1D26Q86UD7 250 aa4.74□□□□□ -1.65
SF3B3-210ENST00000567654 SLC38A6Q8IZM9 456 aa4.74□□□□□ -1.65
SF3B3-210ENST00000567654 FAM216BQ8N7L0 139 aa4.74□□□□□ -1.65
SF3B3-210ENST00000567654 DEFB108BQ8NET1 73 aa4.74□□□□□ -1.65
SF3B3-210ENST00000567654 MRGPRDQ8TDS7 321 aa4.74□□□□□ -1.65
SF3B3-210ENST00000567654 CA5BP1Q8WTZ4 195 aa4.74□□□□□ -1.65
SF3B3-210ENST00000567654 NEU4Q8WWR8 484 aaPredicted RBP4.74□□□□□ -1.65
SF3B3-210ENST00000567654 ITLN2Q8WWU7 325 aaPredicted RBP4.74□□□□□ -1.65
SF3B3-210ENST00000567654 IL1F10Q8WWZ1 152 aa4.74□□□□□ -1.65
SF3B3-210ENST00000567654 MSI2Q96DH6 328 aaKnown RBP4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms