RNA–Protein interactions for RNA: ENST00000566926.1

CLK3-218, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-218ENST00000566926 SNAPC3Q92966 411 aa10.96□□□□□ -0.65
CLK3-218ENST00000566926 NECAP2Q9NVZ3 263 aa10.96□□□□□ -0.65
CLK3-218ENST00000566926 LINC00312Q9Y6C7 94 aa10.96□□□□□ -0.65
CLK3-218ENST00000566926 HSPB6O14558 160 aa10.95□□□□□ -0.66
CLK3-218ENST00000566926 MT-ND4P03905 459 aa10.95□□□□□ -0.66
CLK3-218ENST00000566926 AMY2AP04746 511 aa10.95□□□□□ -0.66
CLK3-218ENST00000566926 CCL3L1P16619 93 aa10.95□□□□□ -0.66
CLK3-218ENST00000566926 BTCP35070 178 aa10.95□□□□□ -0.66
CLK3-218ENST00000566926 HRH1P35367 487 aa10.95□□□□□ -0.66
CLK3-218ENST00000566926 SAA4P35542 130 aa10.95□□□□□ -0.66
CLK3-218ENST00000566926 LGALS4P56470 323 aa10.95□□□□□ -0.66
CLK3-218ENST00000566926 EDDM3AQ14507 147 aa10.95□□□□□ -0.66
CLK3-218ENST00000566926 ZNF273Q14593 569 aa10.95□□□□□ -0.66
CLK3-218ENST00000566926 ZNF880Q6PDB4 577 aa10.95□□□□□ -0.66
CLK3-218ENST00000566926 GVQW1Q8N7I0 195 aa10.95□□□□□ -0.66
CLK3-218ENST00000566926 ZNF714Q96N38 554 aa10.95□□□□□ -0.66
CLK3-218ENST00000566926 SCGB3A2Q96PL1 93 aa10.95□□□□□ -0.66
CLK3-218ENST00000566926 MARVELD1Q9BSK0 173 aa10.95□□□□□ -0.66
CLK3-218ENST00000566926 Q9N2K0 584 aa10.95□□□□□ -0.66
CLK3-218ENST00000566926 RAB9BQ9NP90 201 aa10.95□□□□□ -0.66
CLK3-218ENST00000566926 ZNF581Q9P0T4 197 aa10.95□□□□□ -0.66
CLK3-218ENST00000566926 UBE2J1Q9Y385 318 aaPredicted RBP10.95□□□□□ -0.66
CLK3-218ENST00000566926 A0A1W2PRD5 423 aa10.94□□□□□ -0.66
CLK3-218ENST00000566926 A0A1W2PRF3 423 aa10.94□□□□□ -0.66
CLK3-218ENST00000566926 A0A1W2PRM7 423 aa10.94□□□□□ -0.66
CLK3-218ENST00000566926 VGLL3A8MV65 326 aa10.94□□□□□ -0.66
CLK3-218ENST00000566926 HAX1O00165 279 aa10.94□□□□□ -0.66
CLK3-218ENST00000566926 PSPNO60542 156 aa10.94□□□□□ -0.66
CLK3-218ENST00000566926 NDUFB6O95139 128 aa10.94□□□□□ -0.66
CLK3-218ENST00000566926 TCRBP04435 133 aa10.94□□□□□ -0.66
CLK3-218ENST00000566926 FCER2P06734 321 aa10.94□□□□□ -0.66
CLK3-218ENST00000566926 IER3P46695 156 aa10.94□□□□□ -0.66
CLK3-218ENST00000566926 OR3A1P47881 315 aa10.94□□□□□ -0.66
CLK3-218ENST00000566926 P2RX3P56373 397 aa10.94□□□□□ -0.66
CLK3-218ENST00000566926 CDK10Q15131 360 aa10.94□□□□□ -0.66
CLK3-218ENST00000566926 C6orf183Q5T699 404 aa10.94□□□□□ -0.66
CLK3-218ENST00000566926 OR52W1Q6IF63 320 aa10.94□□□□□ -0.66
CLK3-218ENST00000566926 OVCH2Q7RTZ1 564 aa10.94□□□□□ -0.66
CLK3-218ENST00000566926 RTN4RL2Q86UN3 420 aa10.94□□□□□ -0.66
CLK3-218ENST00000566926 C11orf42Q8N5U0 333 aa10.94□□□□□ -0.66
CLK3-218ENST00000566926 C3orf56Q8N813 242 aa10.94□□□□□ -0.66
CLK3-218ENST00000566926 OR4S1Q8NGB4 309 aa10.94□□□□□ -0.66
CLK3-218ENST00000566926 OR4A4PQ8NGN8 299 aa10.94□□□□□ -0.66
CLK3-218ENST00000566926 OR13D1Q8NGV5 346 aa10.94□□□□□ -0.66
CLK3-218ENST00000566926 OR56B4Q8NH76 319 aa10.94□□□□□ -0.66
CLK3-218ENST00000566926 MRPL30Q8TCC3 161 aaKnown RBP10.94□□□□□ -0.66
CLK3-218ENST00000566926 DYRK2Q92630 601 aa10.94□□□□□ -0.66
CLK3-218ENST00000566926 PPA2Q9H2U2 334 aa10.94□□□□□ -0.66
CLK3-218ENST00000566926 MBNL3Q9NUK0 354 aaKnown RBP10.94□□□□□ -0.66
CLK3-218ENST00000566926 KCNIP1Q9NZI2 227 aa10.94□□□□□ -0.66
CLK3-218ENST00000566926 ZNRD1Q9P1U0 126 aa10.94□□□□□ -0.66
CLK3-218ENST00000566926 TRGV10A0A0A0MS01 117 aa10.93□□□□□ -0.66
CLK3-218ENST00000566926 TRDCB7Z8K6 153 aa10.93□□□□□ -0.66
CLK3-218ENST00000566926 FABP7O15540 132 aa10.93□□□□□ -0.66
CLK3-218ENST00000566926 DHFRP00374 187 aa10.93□□□□□ -0.66
CLK3-218ENST00000566926 GLP1RP43220 463 aa10.93□□□□□ -0.66
CLK3-218ENST00000566926 DLX1P56177 255 aa10.93□□□□□ -0.66
CLK3-218ENST00000566926 DLX6P56179 175 aa10.93□□□□□ -0.66
CLK3-218ENST00000566926 TSPAN5P62079 268 aa10.93□□□□□ -0.66
CLK3-218ENST00000566926 PRB3Q04118 309 aaPredicted RBP10.93□□□□□ -0.66
CLK3-218ENST00000566926 SURF2Q15527 256 aaPredicted RBP10.93□□□□□ -0.66
CLK3-218ENST00000566926 RSBN1Q5VWQ0 802 aaPredicted RBP10.93□□□□□ -0.66
CLK3-218ENST00000566926 BRICD5Q6PL45 260 aa10.93□□□□□ -0.66
CLK3-218ENST00000566926 IDO2Q6ZQW0 420 aa10.93□□□□□ -0.66
CLK3-218ENST00000566926 BEND2Q8NDZ0 799 aa10.93□□□□□ -0.66
CLK3-218ENST00000566926 OR51S1Q8NGJ8 323 aa10.93□□□□□ -0.66
CLK3-218ENST00000566926 OR5R1Q8NH85 324 aa10.93□□□□□ -0.66
CLK3-218ENST00000566926 HDHD3Q9BSH5 251 aaPredicted RBP10.93□□□□□ -0.66
CLK3-218ENST00000566926 TINAGL1Q9GZM7 467 aaPredicted RBP10.93□□□□□ -0.66
CLK3-218ENST00000566926 GAL3ST2Q9H3Q3 398 aa10.93□□□□□ -0.66
CLK3-218ENST00000566926 TNFRSF19Q9NS68 423 aa10.93□□□□□ -0.66
CLK3-218ENST00000566926 OR6C3Q9NZP0 311 aa10.93□□□□□ -0.66
CLK3-218ENST00000566926 ZNF230Q9UIE0 474 aaPredicted RBP10.93□□□□□ -0.66
CLK3-218ENST00000566926 TRAPPC2LQ9UL33 140 aa10.93□□□□□ -0.66
CLK3-218ENST00000566926 A0A1B0GUS0 222 aa10.92□□□□□ -0.66
CLK3-218ENST00000566926 FAM181BA6NEQ2 426 aa10.92□□□□□ -0.66
CLK3-218ENST00000566926 M0QYG6 137 aa10.92□□□□□ -0.66
CLK3-218ENST00000566926 PRAF2O60831 178 aa10.92□□□□□ -0.66
CLK3-218ENST00000566926 IGHV1-8P0DP01 117 aa10.92□□□□□ -0.66
CLK3-218ENST00000566926 HLA-DRB3P79483 266 aa10.92□□□□□ -0.66
CLK3-218ENST00000566926 ATXN7L3Q14CW9 347 aaPredicted RBP10.92□□□□□ -0.66
CLK3-218ENST00000566926 AWAT1Q58HT5 328 aa10.92□□□□□ -0.66
CLK3-218ENST00000566926 KRBOX4Q5JUW0 171 aa10.92□□□□□ -0.66
CLK3-218ENST00000566926 HCP5Q6MZN7 132 aa10.92□□□□□ -0.66
CLK3-218ENST00000566926 PNKDQ8N490 385 aa10.92□□□□□ -0.66
CLK3-218ENST00000566926 TPRX1Q8N7U7 411 aa10.92□□□□□ -0.66
CLK3-218ENST00000566926 ZNF565Q8N9K5 539 aa10.92□□□□□ -0.66
CLK3-218ENST00000566926 OR4D10Q8NGI6 311 aa10.92□□□□□ -0.66
CLK3-218ENST00000566926 OR6F1Q8NGZ6 308 aa10.92□□□□□ -0.66
CLK3-218ENST00000566926 CORO2AQ92828 525 aa10.92□□□□□ -0.66
CLK3-218ENST00000566926 GINS4Q9BRT9 223 aa10.92□□□□□ -0.66
CLK3-218ENST00000566926 CHIAQ9BZP6 476 aa10.92□□□□□ -0.66
CLK3-218ENST00000566926 C20orf85Q9H1P6 137 aa10.92□□□□□ -0.66
CLK3-218ENST00000566926 NUDT15Q9NV35 164 aa10.92□□□□□ -0.66
CLK3-218ENST00000566926 TAS2R3Q9NYW6 316 aa10.92□□□□□ -0.66
CLK3-218ENST00000566926 EHFQ9NZC4 300 aa10.92□□□□□ -0.66
CLK3-218ENST00000566926 SLC23A1Q9UHI7 598 aa10.92□□□□□ -0.66
CLK3-218ENST00000566926 TBL2Q9Y4P3 447 aaKnown RBP10.92□□□□□ -0.66
CLK3-218ENST00000566926 MEIKINA0A087WXM9 373 aa10.91□□□□□ -0.66
CLK3-218ENST00000566926 NPIPB11E5RHQ5 1161 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms