RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 ANKRD65E5RJM6 399 aa14.33□□□□□ -0.12
USB1-213ENST00000566292 IGF1P05019 195 aa14.33□□□□□ -0.12
USB1-213ENST00000566292 CD37P11049 281 aa14.33□□□□□ -0.12
USB1-213ENST00000566292 MYF6P23409 242 aa14.33□□□□□ -0.12
USB1-213ENST00000566292 CNTFRP26992 372 aa14.33□□□□□ -0.12
USB1-213ENST00000566292 HTR2CP28335 458 aa14.33□□□□□ -0.12
USB1-213ENST00000566292 CDX1P47902 265 aaPredicted RBP14.33□□□□□ -0.12
USB1-213ENST00000566292 QRFPP83859 136 aa14.33□□□□□ -0.12
USB1-213ENST00000566292 UNC119Q13432 240 aa14.33□□□□□ -0.12
USB1-213ENST00000566292 KIR2DS1Q14954 304 aa14.33□□□□□ -0.12
USB1-213ENST00000566292 SPHARQ15513 63 aa14.33□□□□□ -0.12
USB1-213ENST00000566292 MMDQ15546 238 aa14.33□□□□□ -0.12
USB1-213ENST00000566292 HMGN3Q15651 99 aa14.33□□□□□ -0.12
USB1-213ENST00000566292 LY6G6FQ5SQ64 297 aa14.33□□□□□ -0.12
USB1-213ENST00000566292 GALMQ96C23 342 aa14.33□□□□□ -0.12
USB1-213ENST00000566292 NABP2Q9BQ15 211 aa14.33□□□□□ -0.12
USB1-213ENST00000566292 TM2D1Q9BX74 207 aa14.33□□□□□ -0.12
USB1-213ENST00000566292 TMEM59Q9BXS4 323 aa14.33□□□□□ -0.12
USB1-213ENST00000566292 NKX1-2Q9UD57 310 aaPredicted RBP14.33□□□□□ -0.12
USB1-213ENST00000566292 ZNF107Q9UII5 783 aaPredicted RBP14.33□□□□□ -0.12
USB1-213ENST00000566292 ZNF580Q9UK33 172 aa14.33□□□□□ -0.12
USB1-213ENST00000566292 SAA2-SAA4A0A096LPE2 208 aa14.32□□□□□ -0.12
USB1-213ENST00000566292 SAA2P0DJI9 122 aaPredicted RBP14.32□□□□□ -0.12
USB1-213ENST00000566292 SRMP19623 302 aa14.32□□□□□ -0.12
USB1-213ENST00000566292 VDAC1P21796 283 aa14.32□□□□□ -0.12
USB1-213ENST00000566292 PSMB8P28062 276 aa14.32□□□□□ -0.12
USB1-213ENST00000566292 OR3A3P47888 321 aa14.32□□□□□ -0.12
USB1-213ENST00000566292 RAB25P57735 213 aa14.32□□□□□ -0.12
USB1-213ENST00000566292 ACTBP60709 375 aa14.32□□□□□ -0.12
USB1-213ENST00000566292 IRF3Q14653 427 aa14.32□□□□□ -0.12
USB1-213ENST00000566292 C11orf87Q6NUJ2 197 aa14.32□□□□□ -0.12
USB1-213ENST00000566292 ZNF833PQ6ZTB9 187 aa14.32□□□□□ -0.12
USB1-213ENST00000566292 CEACAM19Q7Z692 300 aa14.32□□□□□ -0.12
USB1-213ENST00000566292 OR8U1Q8NH10 309 aa14.32□□□□□ -0.12
USB1-213ENST00000566292 KCTD7Q96MP8 289 aa14.32□□□□□ -0.12
USB1-213ENST00000566292 VCXQ9H320 206 aa14.32□□□□□ -0.12
USB1-213ENST00000566292 A0A0A6YYD4 124 aa14.31□□□□□ -0.12
USB1-213ENST00000566292 TMEM14DPA8MWL7 114 aa14.31□□□□□ -0.12
USB1-213ENST00000566292 SLC22A1O15245 554 aa14.31□□□□□ -0.12
USB1-213ENST00000566292 RGS11O94810 467 aa14.31□□□□□ -0.12
USB1-213ENST00000566292 UCHL1P09936 223 aa14.31□□□□□ -0.12
USB1-213ENST00000566292 HSD17B12Q53GQ0 312 aa14.31□□□□□ -0.12
USB1-213ENST00000566292 ZNF880Q6PDB4 577 aa14.31□□□□□ -0.12
USB1-213ENST00000566292 SVOPQ8N4V2 548 aa14.31□□□□□ -0.12
USB1-213ENST00000566292 KCNG3Q8TAE7 436 aa14.31□□□□□ -0.12
USB1-213ENST00000566292 IFI27L2Q9H2X8 130 aa14.31□□□□□ -0.12
USB1-213ENST00000566292 LRRC42Q9Y546 428 aa14.31□□□□□ -0.12
USB1-213ENST00000566292 NAPSAO96009 420 aa14.3□□□□□ -0.12
USB1-213ENST00000566292 PPIFP30405 207 aaKnown RBP14.3□□□□□ -0.12
USB1-213ENST00000566292 MED22Q15528 200 aa14.3□□□□□ -0.12
USB1-213ENST00000566292 VAX1Q5SQQ9 334 aa14.3□□□□□ -0.12
USB1-213ENST00000566292 LIPKQ5VXJ0 399 aa14.3□□□□□ -0.12
USB1-213ENST00000566292 OR2AK2Q8NG84 335 aa14.3□□□□□ -0.12
USB1-213ENST00000566292 MYOZ3Q8TDC0 251 aa14.3□□□□□ -0.12
USB1-213ENST00000566292 C4orf3Q8WVX3 66 aa14.3□□□□□ -0.12
USB1-213ENST00000566292 IL1F10Q8WWZ1 152 aa14.3□□□□□ -0.12
USB1-213ENST00000566292 GFI1Q99684 422 aa14.3□□□□□ -0.12
USB1-213ENST00000566292 WSB1Q9Y6I7 421 aa14.3□□□□□ -0.12
USB1-213ENST00000566292 IGHV7-81A0A0B4J1V7 117 aa14.29□□□□□ -0.12
USB1-213ENST00000566292 G3V318 75 aa14.29□□□□□ -0.12
USB1-213ENST00000566292 ATP6V0E1O15342 81 aa14.29□□□□□ -0.12
USB1-213ENST00000566292 ST8SIA5O15466 376 aa14.29□□□□□ -0.12
USB1-213ENST00000566292 BPNT1O95861 308 aa14.29□□□□□ -0.12
USB1-213ENST00000566292 HLA-DRB1P01911 266 aa14.29□□□□□ -0.12
USB1-213ENST00000566292 BLVRBP30043 206 aaPredicted RBP14.29□□□□□ -0.12
USB1-213ENST00000566292 LUMP51884 338 aaPredicted RBP14.29□□□□□ -0.12
USB1-213ENST00000566292 AQP4P55087 323 aa14.29□□□□□ -0.12
USB1-213ENST00000566292 DGCR2P98153 550 aa14.29□□□□□ -0.12
USB1-213ENST00000566292 KIAA0141Q14154 515 aaPredicted RBP14.29□□□□□ -0.12
USB1-213ENST00000566292 TMEM91Q6ZNR0 172 aa14.29□□□□□ -0.12
USB1-213ENST00000566292 OR6M1Q8NGM8 313 aa14.29□□□□□ -0.12
USB1-213ENST00000566292 NRG4Q8WWG1 115 aa14.29□□□□□ -0.12
USB1-213ENST00000566292 TMEM203Q969S6 136 aa14.29□□□□□ -0.12
USB1-213ENST00000566292 ZNF251Q9BRH9 671 aa14.29□□□□□ -0.12
USB1-213ENST00000566292 ANKRD60Q9BZ19 345 aa14.29□□□□□ -0.12
USB1-213ENST00000566292 PARP12Q9H0J9 701 aaKnown RBP14.29□□□□□ -0.12
USB1-213ENST00000566292 LPAR5Q9H1C0 372 aa14.29□□□□□ -0.12
USB1-213ENST00000566292 KLK15Q9H2R5 256 aa14.29□□□□□ -0.12
USB1-213ENST00000566292 OR51J1Q9H342 316 aa14.29□□□□□ -0.12
USB1-213ENST00000566292 SCN3BQ9NY72 215 aa14.29□□□□□ -0.12
USB1-213ENST00000566292 ABRACLQ9P1F3 81 aa14.29□□□□□ -0.12
USB1-213ENST00000566292 NBR2O15453 112 aa14.28□□□□□ -0.12
USB1-213ENST00000566292 OR5H8P0DN80 308 aa14.28□□□□□ -0.12
USB1-213ENST00000566292 FHL3Q13643 280 aa14.28□□□□□ -0.12
USB1-213ENST00000566292 C5orf64Q2M2E5 130 aa14.28□□□□□ -0.12
USB1-213ENST00000566292 NPBQ8NG41 125 aa14.28□□□□□ -0.12
USB1-213ENST00000566292 OR5M8Q8NGP6 311 aa14.28□□□□□ -0.12
USB1-213ENST00000566292 UFD1Q92890 307 aa14.28□□□□□ -0.12
USB1-213ENST00000566292 B9D2Q9BPU9 175 aa14.28□□□□□ -0.12
USB1-213ENST00000566292 CHCHD6Q9BRQ6 235 aa14.28□□□□□ -0.12
USB1-213ENST00000566292 HDHD3Q9BSH5 251 aaPredicted RBP14.28□□□□□ -0.12
USB1-213ENST00000566292 CHMP1AQ9HD42 196 aaPredicted RBP14.28□□□□□ -0.12
USB1-213ENST00000566292 STEAP1Q9UHE8 339 aa14.28□□□□□ -0.12
USB1-213ENST00000566292 SOCS1O15524 211 aa14.27□□□□□ -0.13
USB1-213ENST00000566292 NDUFA3O95167 84 aa14.27□□□□□ -0.13
USB1-213ENST00000566292 IGLV1-40P01703 118 aa14.27□□□□□ -0.13
USB1-213ENST00000566292 RPS25P62851 125 aaKnown RBP14.27□□□□□ -0.13
USB1-213ENST00000566292 CD69Q07108 199 aa14.27□□□□□ -0.13
USB1-213ENST00000566292 P2RY14Q15391 338 aa14.27□□□□□ -0.13
USB1-213ENST00000566292 RPL39P5Q59GN2 51 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms