RNA–Protein interactions for RNA: ENST00000566290.5

RAB40C-210, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 753 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-210ENST00000566290 SPIN2BQ9BPZ2 258 aa14.01□□□□□ -0.17
RAB40C-210ENST00000566290 GCM1Q9NP62 436 aa14.01□□□□□ -0.17
RAB40C-210ENST00000566290 OR14J1Q9UGF5 321 aa14.01□□□□□ -0.17
RAB40C-210ENST00000566290 NDRG3Q9UGV2 375 aa14.01□□□□□ -0.17
RAB40C-210ENST00000566290 FAM25EA8MYX2 175 aa14□□□□□ -0.17
RAB40C-210ENST00000566290 C12orf77C9JDV5 145 aa14□□□□□ -0.17
RAB40C-210ENST00000566290 K7N7A8 449 aa14□□□□□ -0.17
RAB40C-210ENST00000566290 BCL2L11O43521 198 aa14□□□□□ -0.17
RAB40C-210ENST00000566290 FSTL3O95633 263 aa14□□□□□ -0.17
RAB40C-210ENST00000566290 SLC25A6P12236 298 aa14□□□□□ -0.17
RAB40C-210ENST00000566290 GZMHP20718 246 aa14□□□□□ -0.17
RAB40C-210ENST00000566290 S100A1P23297 94 aa14□□□□□ -0.17
RAB40C-210ENST00000566290 UBA52P62987 128 aaKnown RBP14□□□□□ -0.17
RAB40C-210ENST00000566290 CLLU1Q5K131 121 aa14□□□□□ -0.17
RAB40C-210ENST00000566290 GGNBP1Q5YKI7 109 aa14□□□□□ -0.17
RAB40C-210ENST00000566290 STUMQ69YW2 141 aa14□□□□□ -0.17
RAB40C-210ENST00000566290 MOGAT3Q86VF5 341 aa14□□□□□ -0.17
RAB40C-210ENST00000566290 SECTM1Q8WVN6 248 aa14□□□□□ -0.17
RAB40C-210ENST00000566290 GALMQ96C23 342 aa14□□□□□ -0.17
RAB40C-210ENST00000566290 PHYHIPLQ96FC7 376 aa14□□□□□ -0.17
RAB40C-210ENST00000566290 OR10C1Q96KK4 312 aa14□□□□□ -0.17
RAB40C-210ENST00000566290 ARL6Q9H0F7 186 aa14□□□□□ -0.17
RAB40C-210ENST00000566290 MBD2Q9UBB5 411 aa14□□□□□ -0.17
RAB40C-210ENST00000566290 UBQLN2Q9UHD9 624 aa14□□□□□ -0.17
RAB40C-210ENST00000566290 KIF25Q9UIL4 384 aa14□□□□□ -0.17
RAB40C-210ENST00000566290 HEATR1Q9H583 2144 aaKnown RBP14□□□□□ -0.17
RAB40C-210ENST00000566290 C13orf42A0A1B0GVH6 325 aa13.99□□□□□ -0.17
RAB40C-210ENST00000566290 DEFB108AA8MXU0 73 aa13.99□□□□□ -0.17
RAB40C-210ENST00000566290 SHISA9B4DS77 424 aa13.99□□□□□ -0.17
RAB40C-210ENST00000566290 ITGB1BP1O14713 200 aa13.99□□□□□ -0.17
RAB40C-210ENST00000566290 OR4A8P0C604 315 aa13.99□□□□□ -0.17
RAB40C-210ENST00000566290 F2RP25116 425 aa13.99□□□□□ -0.17
RAB40C-210ENST00000566290 AP2S1P53680 142 aaPredicted RBP13.99□□□□□ -0.17
RAB40C-210ENST00000566290 IAH1Q2TAA2 248 aaPredicted RBP13.99□□□□□ -0.17
RAB40C-210ENST00000566290 PHLDA2Q53GA4 152 aa13.99□□□□□ -0.17
RAB40C-210ENST00000566290 BEX5Q5H9J7 111 aa13.99□□□□□ -0.17
RAB40C-210ENST00000566290 TBC1D26Q86UD7 250 aa13.99□□□□□ -0.17
RAB40C-210ENST00000566290 INO80EQ8NBZ0 244 aaPredicted RBP13.99□□□□□ -0.17
RAB40C-210ENST00000566290 RNF126Q9BV68 326 aa13.99□□□□□ -0.17
RAB40C-210ENST00000566290 EGLN1Q9GZT9 426 aa13.99□□□□□ -0.17
RAB40C-210ENST00000566290 RNF212BA8MTL3 300 aa13.98□□□□□ -0.17
RAB40C-210ENST00000566290 PHF1O43189 567 aaPredicted RBP13.98□□□□□ -0.17
RAB40C-210ENST00000566290 SPRY3O43610 288 aa13.98□□□□□ -0.17
RAB40C-210ENST00000566290 PGLYRP1O75594 196 aaPredicted RBP13.98□□□□□ -0.17
RAB40C-210ENST00000566290 P2RX3P56373 397 aa13.98□□□□□ -0.17
RAB40C-210ENST00000566290 EXOSC2Q13868 293 aaKnown RBP13.98□□□□□ -0.17
RAB40C-210ENST00000566290 KRBOX4Q5JUW0 171 aa13.98□□□□□ -0.17
RAB40C-210ENST00000566290 VHLLQ6RSH7 139 aa13.98□□□□□ -0.17
RAB40C-210ENST00000566290 CLEC9AQ6UXN8 241 aa13.98□□□□□ -0.17
RAB40C-210ENST00000566290 WFDC11Q8NEX6 87 aa13.98□□□□□ -0.17
RAB40C-210ENST00000566290 STOML3Q8TAV4 291 aa13.98□□□□□ -0.17
RAB40C-210ENST00000566290 TP53RKQ96S44 253 aa13.98□□□□□ -0.17
RAB40C-210ENST00000566290 LINC00574Q9H8X3 128 aa13.98□□□□□ -0.17
RAB40C-210ENST00000566290 LIN7CQ9NUP9 197 aaKnown RBP13.98□□□□□ -0.17
RAB40C-210ENST00000566290 RDH8Q9NYR8 311 aa13.98□□□□□ -0.17
RAB40C-210ENST00000566290 OR6C3Q9NZP0 311 aa13.98□□□□□ -0.17
RAB40C-210ENST00000566290 JPT1Q9UK76 154 aa13.98□□□□□ -0.17
RAB40C-210ENST00000566290 AUP1Q9Y679 476 aa13.98□□□□□ -0.17
RAB40C-210ENST00000566290 PRR14LQ5THK1 2151 aa13.98□□□□□ -0.17
RAB40C-210ENST00000566290 KANTRA0A1W2PQU2 76 aa13.97□□□□□ -0.17
RAB40C-210ENST00000566290 ODAMA1E959 279 aa13.97□□□□□ -0.17
RAB40C-210ENST00000566290 LRRC30A6NM36 301 aa13.97□□□□□ -0.17
RAB40C-210ENST00000566290 H0YIZ8 118 aa13.97□□□□□ -0.17
RAB40C-210ENST00000566290 C15orf65H3BRN8 121 aa13.97□□□□□ -0.17
RAB40C-210ENST00000566290 F2RL2O00254 374 aa13.97□□□□□ -0.17
RAB40C-210ENST00000566290 SPINT2O43291 252 aa13.97□□□□□ -0.17
RAB40C-210ENST00000566290 CD3EP07766 207 aa13.97□□□□□ -0.17
RAB40C-210ENST00000566290 HOXB5P09067 269 aa13.97□□□□□ -0.17
RAB40C-210ENST00000566290 VDAC1P21796 283 aa13.97□□□□□ -0.17
RAB40C-210ENST00000566290 LOXP28300 417 aaPredicted RBP13.97□□□□□ -0.17
RAB40C-210ENST00000566290 GABRA2P47869 451 aa13.97□□□□□ -0.17
RAB40C-210ENST00000566290 CEBPDP49716 269 aaPredicted RBP13.97□□□□□ -0.17
RAB40C-210ENST00000566290 ZNF788Q6ZQV5 615 aa13.97□□□□□ -0.17
RAB40C-210ENST00000566290 C1orf87Q8N0U7 546 aa13.97□□□□□ -0.17
RAB40C-210ENST00000566290 SCARB1Q8WTV0 552 aa13.97□□□□□ -0.17
RAB40C-210ENST00000566290 RBPMSQ93062 196 aaKnown RBP13.97□□□□□ -0.17
RAB40C-210ENST00000566290 TMEM204Q9BSN7 226 aa13.97□□□□□ -0.17
RAB40C-210ENST00000566290 MS4A5Q9H3V2 200 aa13.97□□□□□ -0.17
RAB40C-210ENST00000566290 PLEKHF2Q9H8W4 249 aa13.97□□□□□ -0.17
RAB40C-210ENST00000566290 PLEKHA2Q9HB19 425 aa13.97□□□□□ -0.17
RAB40C-210ENST00000566290 CCL28Q9NRJ3 127 aa13.97□□□□□ -0.17
RAB40C-210ENST00000566290 OR1A1Q9P1Q5 309 aa13.97□□□□□ -0.17
RAB40C-210ENST00000566290 TANC2Q9HCD6 1990 aa13.96□□□□□ -0.17
RAB40C-210ENST00000566290 RPS10-NUDT3A0A1W2PQS6 291 aa13.96□□□□□ -0.17
RAB40C-210ENST00000566290 LINC00862A6NCI5 91 aa13.96□□□□□ -0.17
RAB40C-210ENST00000566290 B9A039 149 aa13.96□□□□□ -0.17
RAB40C-210ENST00000566290 TAAR5O14804 337 aa13.96□□□□□ -0.17
RAB40C-210ENST00000566290 HSPA12AO43301 675 aa13.96□□□□□ -0.17
RAB40C-210ENST00000566290 TSC22D2O75157 780 aa13.96□□□□□ -0.17
RAB40C-210ENST00000566290 DEDDO75618 318 aa13.96□□□□□ -0.17
RAB40C-210ENST00000566290 ZNF205O95201 554 aa13.96□□□□□ -0.17
RAB40C-210ENST00000566290 IGLV2-14P01704 120 aa13.96□□□□□ -0.17
RAB40C-210ENST00000566290 HBZP02008 142 aa13.96□□□□□ -0.17
RAB40C-210ENST00000566290 IRF2P14316 349 aa13.96□□□□□ -0.17
RAB40C-210ENST00000566290 IL2RGP31785 369 aa13.96□□□□□ -0.17
RAB40C-210ENST00000566290 APOBEC3AP31941 199 aaPredicted RBP13.96□□□□□ -0.17
RAB40C-210ENST00000566290 HTR2BP41595 481 aa13.96□□□□□ -0.17
RAB40C-210ENST00000566290 AESQ08117 197 aa13.96□□□□□ -0.17
RAB40C-210ENST00000566290 RAB32Q13637 225 aa13.96□□□□□ -0.17
RAB40C-210ENST00000566290 NMSQ5H8A3 153 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms