RNA–Protein interactions for RNA: ENST00000566078.1

CTCF-203, Transcript of CCCTC-binding factor, humanhuman

TSL 2

Gene CTCF, Length 1,627 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-203ENST00000566078 IGHV4-30-2A0A087WSY4 118 aa25.14■■□□□ 1.61
CTCF-203ENST00000566078 CREBL2O60519 120 aaPredicted RBP25.14■■□□□ 1.61
CTCF-203ENST00000566078 RGS11O94810 467 aa25.14■■□□□ 1.61
CTCF-203ENST00000566078 HLA-AP01891 365 aaKnown RBP25.14■■□□□ 1.61
CTCF-203ENST00000566078 PIGPP57054 158 aa25.14■■□□□ 1.61
CTCF-203ENST00000566078 ERVFRD-1P60508 538 aa25.14■■□□□ 1.61
CTCF-203ENST00000566078 LMO4P61968 165 aa25.14■■□□□ 1.61
CTCF-203ENST00000566078 TMEM128Q5BJH2 165 aa25.14■■□□□ 1.61
CTCF-203ENST00000566078 ZNF626Q68DY1 528 aa25.14■■□□□ 1.61
CTCF-203ENST00000566078 HEPN1Q6WQI6 88 aa25.14■■□□□ 1.61
CTCF-203ENST00000566078 OR52M1Q8NGK5 317 aa25.14■■□□□ 1.61
CTCF-203ENST00000566078 RAB39BQ96DA2 213 aa25.14■■□□□ 1.61
CTCF-203ENST00000566078 ASH1LQ9NR48 2969 aaKnown RBP25.14■■□□□ 1.61
CTCF-203ENST00000566078 SLC2A9Q9NRM0 540 aa25.14■■□□□ 1.61
CTCF-203ENST00000566078 A0A1W2PPH5 198 aa25.13■■□□□ 1.61
CTCF-203ENST00000566078 GPR31O00270 319 aa25.13■■□□□ 1.61
CTCF-203ENST00000566078 IGHV3-7P01780 117 aa25.13■■□□□ 1.61
CTCF-203ENST00000566078 VAMP1P23763 118 aa25.13■■□□□ 1.61
CTCF-203ENST00000566078 DHRS2Q13268 280 aa25.13■■□□□ 1.61
CTCF-203ENST00000566078 DEFB113Q30KQ7 82 aa25.13■■□□□ 1.61
CTCF-203ENST00000566078 UTF1Q5T230 341 aa25.13■■□□□ 1.61
CTCF-203ENST00000566078 EDARADDQ8WWZ3 215 aa25.13■■□□□ 1.61
CTCF-203ENST00000566078 LEAP2Q969E1 77 aa25.13■■□□□ 1.61
CTCF-203ENST00000566078 CSMD2Q7Z408 3487 aa25.13■■□□□ 1.61
CTCF-203ENST00000566078 LOC105371242A0A075B767 164 aa25.12■■□□□ 1.61
CTCF-203ENST00000566078 SNRPGP15A8MWD9 76 aa25.12■■□□□ 1.61
CTCF-203ENST00000566078 DHODHQ02127 395 aa25.12■■□□□ 1.61
CTCF-203ENST00000566078 CD276Q5ZPR3 534 aa25.12■■□□□ 1.61
CTCF-203ENST00000566078 LYG2Q86SG7 212 aa25.12■■□□□ 1.61
CTCF-203ENST00000566078 LY6G5BQ8NDX9 201 aa25.12■■□□□ 1.61
CTCF-203ENST00000566078 OR2AK2Q8NG84 335 aa25.12■■□□□ 1.61
CTCF-203ENST00000566078 OR2D2Q9H210 308 aa25.12■■□□□ 1.61
CTCF-203ENST00000566078 CLEC12BQ2HXU8 276 aa25.12■■□□□ 1.61
CTCF-203ENST00000566078 CCDC71LQ8N9Z2 235 aa25.12■■□□□ 1.61
CTCF-203ENST00000566078 ZNF431Q8TF32 576 aaPredicted RBP25.12■■□□□ 1.61
CTCF-203ENST00000566078 PSG11Q9UQ72 335 aa25.12■■□□□ 1.61
CTCF-203ENST00000566078 C9orf170A2RU37 121 aa25.11■■□□□ 1.61
CTCF-203ENST00000566078 KIAA1324LA8MWY0 1029 aaPredicted RBP25.11■■□□□ 1.61
CTCF-203ENST00000566078 ST8SIA5O15466 376 aa25.11■■□□□ 1.61
CTCF-203ENST00000566078 SSNA1O43805 119 aa25.11■■□□□ 1.61
CTCF-203ENST00000566078 LIPFP07098 398 aa25.11■■□□□ 1.61
CTCF-203ENST00000566078 RNF150Q9ULK6 438 aa25.11■■□□□ 1.61
CTCF-203ENST00000566078 ABCA2Q9BZC7 2435 aa25.11■■□□□ 1.61
CTCF-203ENST00000566078 IGHV4-61A0A0C4DH41 118 aa25.1■■□□□ 1.61
CTCF-203ENST00000566078 CRYM-AS1A6NIL9 109 aa25.1■■□□□ 1.61
CTCF-203ENST00000566078 C11orf91Q3C1V1 193 aa25.1■■□□□ 1.61
CTCF-203ENST00000566078 RTN4IP1Q8WWV3 396 aaPredicted RBP25.1■■□□□ 1.61
CTCF-203ENST00000566078 ONECUT1Q9UBC0 465 aa25.1■■□□□ 1.61
CTCF-203ENST00000566078 TEX13DA0A0J9YY54 714 aaPredicted RBP25.09■■□□□ 1.61
CTCF-203ENST00000566078 C17orf98A8MV24 154 aa25.09■■□□□ 1.61
CTCF-203ENST00000566078 ZFP36P26651 326 aaKnown RBP25.09■■□□□ 1.61
CTCF-203ENST00000566078 RRAS2P62070 204 aaPredicted RBP25.09■■□□□ 1.61
CTCF-203ENST00000566078 SUPT4H1P63272 117 aaKnown RBP25.09■■□□□ 1.61
CTCF-203ENST00000566078 CMTM1Q8IZ96 169 aa25.09■■□□□ 1.61
CTCF-203ENST00000566078 LRRC75A-AS1Q8N1F1 130 aa25.09■■□□□ 1.61
CTCF-203ENST00000566078 ZNF645Q8N7E2 425 aa25.09■■□□□ 1.61
CTCF-203ENST00000566078 MED28Q9H204 178 aa25.09■■□□□ 1.61
CTCF-203ENST00000566078 A8MXK9 166 aa25.08■■□□□ 1.61
CTCF-203ENST00000566078 IGLV2-14P01704 120 aa25.08■■□□□ 1.61
CTCF-203ENST00000566078 GNG10P50151 68 aa25.08■■□□□ 1.61
CTCF-203ENST00000566078 RND3P61587 244 aa25.08■■□□□ 1.61
CTCF-203ENST00000566078 SGPP2Q8IWX5 399 aa25.08■■□□□ 1.61
CTCF-203ENST00000566078 BVESQ8NE79 360 aa25.08■■□□□ 1.61
CTCF-203ENST00000566078 CASTOR1Q8WTX7 329 aa25.08■■□□□ 1.61
CTCF-203ENST00000566078 ABHD14AQ9BUJ0 271 aa25.08■■□□□ 1.61
CTCF-203ENST00000566078 SUCNR1Q9BXA5 334 aa25.08■■□□□ 1.61
CTCF-203ENST00000566078 SLC31A2O15432 143 aa25.08■■□□□ 1.6
CTCF-203ENST00000566078 SFT2D2O95562 160 aa25.08■■□□□ 1.6
CTCF-203ENST00000566078 IGHV1-8P0DP01 117 aa25.08■■□□□ 1.6
CTCF-203ENST00000566078 ZNF134P52741 427 aa25.08■■□□□ 1.6
CTCF-203ENST00000566078 LCN2P80188 198 aa25.08■■□□□ 1.6
CTCF-203ENST00000566078 SLC9A3R2Q15599 337 aa25.08■■□□□ 1.6
CTCF-203ENST00000566078 LY6G6FQ5SQ64 297 aa25.08■■□□□ 1.6
CTCF-203ENST00000566078 C11orf42Q8N5U0 333 aa25.08■■□□□ 1.6
CTCF-203ENST00000566078 FAM216AQ8WUB2 273 aa25.08■■□□□ 1.6
CTCF-203ENST00000566078 NAA60Q9H7X0 242 aa25.08■■□□□ 1.6
CTCF-203ENST00000566078 A0A1W2PPE3 182 aa25.07■■□□□ 1.6
CTCF-203ENST00000566078 HMX3A6NHT5 357 aa25.07■■□□□ 1.6
CTCF-203ENST00000566078 ITGB1BP1O14713 200 aa25.07■■□□□ 1.6
CTCF-203ENST00000566078 TNFSF12O43508 249 aa25.07■■□□□ 1.6
CTCF-203ENST00000566078 ZNF439Q8NDP4 499 aa25.07■■□□□ 1.6
CTCF-203ENST00000566078 CHAC2Q8WUX2 184 aa25.07■■□□□ 1.6
CTCF-203ENST00000566078 ABHD14BQ96IU4 210 aa25.07■■□□□ 1.6
CTCF-203ENST00000566078 AKR1E2Q96JD6 320 aa25.07■■□□□ 1.6
CTCF-203ENST00000566078 GPHA2Q96T91 129 aa25.07■■□□□ 1.6
CTCF-203ENST00000566078 AGMATQ9BSE5 352 aa25.07■■□□□ 1.6
CTCF-203ENST00000566078 SESN1Q9Y6P5 492 aa25.07■■□□□ 1.6
CTCF-203ENST00000566078 PFDN1O60925 122 aa25.06■■□□□ 1.6
CTCF-203ENST00000566078 S100GP29377 79 aa25.06■■□□□ 1.6
CTCF-203ENST00000566078 TBC1D26Q86UD7 250 aa25.06■■□□□ 1.6
CTCF-203ENST00000566078 DRAM1Q8N682 238 aa25.06■■□□□ 1.6
CTCF-203ENST00000566078 MBD6Q96DN6 1003 aa25.06■■□□□ 1.6
CTCF-203ENST00000566078 IFI27L2Q9H2X8 130 aa25.06■■□□□ 1.6
CTCF-203ENST00000566078 RBP4P02753 201 aa25.05■■□□□ 1.6
CTCF-203ENST00000566078 SLC25A16P16260 332 aa25.05■■□□□ 1.6
CTCF-203ENST00000566078 RAB7AP51149 207 aa25.05■■□□□ 1.6
CTCF-203ENST00000566078 CT45A1Q5HYN5 189 aa25.05■■□□□ 1.6
CTCF-203ENST00000566078 CT45A3Q8NHU0 189 aa25.05■■□□□ 1.6
CTCF-203ENST00000566078 NAV2Q8IVL1 2488 aa25.05■■□□□ 1.6
CTCF-203ENST00000566078 MPPED1O15442 326 aa25.04■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms