RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-218ENST00000566029 TMEM202A6NGA9 273 aa2.54□□□□□ -2
CHD9-218ENST00000566029 J3QR06 171 aa2.54□□□□□ -2
CHD9-218ENST00000566029 CTSDP07339 412 aaPredicted RBP2.54□□□□□ -2
CHD9-218ENST00000566029 VAX1Q5SQQ9 334 aa2.54□□□□□ -2
CHD9-218ENST00000566029 HSD11B1LQ7Z5J1 315 aa2.54□□□□□ -2
CHD9-218ENST00000566029 CALHM1Q8IU99 346 aa2.54□□□□□ -2
CHD9-218ENST00000566029 ZNF584Q8IVC4 421 aa2.54□□□□□ -2
CHD9-218ENST00000566029 DCAF4L2Q8NA75 395 aa2.54□□□□□ -2
CHD9-218ENST00000566029 IL17DQ8TAD2 202 aa2.54□□□□□ -2
CHD9-218ENST00000566029 UCN2Q96RP3 112 aa2.54□□□□□ -2
CHD9-218ENST00000566029 TBL1XR1Q9BZK7 514 aa2.54□□□□□ -2
CHD9-218ENST00000566029 ZBP1Q9H171 429 aa2.54□□□□□ -2
CHD9-218ENST00000566029 SLC5A6Q9Y289 635 aa2.54□□□□□ -2
CHD9-218ENST00000566029 PTRH2Q9Y3E5 179 aaKnown RBP2.54□□□□□ -2
CHD9-218ENST00000566029 KBTBD11-OT1A0A1B0GTJ5 212 aa2.54□□□□□ -2
CHD9-218ENST00000566029 C21orf140B9A014 251 aa2.54□□□□□ -2
CHD9-218ENST00000566029 H0YIG0 161 aa2.54□□□□□ -2
CHD9-218ENST00000566029 B3GAT3O94766 335 aa2.54□□□□□ -2
CHD9-218ENST00000566029 HLA-HP01893 362 aa2.54□□□□□ -2
CHD9-218ENST00000566029 PGA3P0DJD8 388 aa2.54□□□□□ -2
CHD9-218ENST00000566029 EFNA3P52797 238 aa2.54□□□□□ -2
CHD9-218ENST00000566029 CLDN2P57739 230 aa2.54□□□□□ -2
CHD9-218ENST00000566029 P2RY6Q15077 328 aa2.54□□□□□ -2
CHD9-218ENST00000566029 LYSMD4Q5XG99 296 aa2.54□□□□□ -2
CHD9-218ENST00000566029 PTCRAQ6ISU1 281 aaPredicted RBP2.54□□□□□ -2
CHD9-218ENST00000566029 TMEM123Q8N131 208 aa2.54□□□□□ -2
CHD9-218ENST00000566029 CSNK1A1LQ8N752 337 aa2.54□□□□□ -2
CHD9-218ENST00000566029 PFN4Q8NHR9 129 aa2.54□□□□□ -2
CHD9-218ENST00000566029 ADTRPQ96IZ2 230 aa2.54□□□□□ -2
CHD9-218ENST00000566029 A0A0A6YYD5 115 aa2.54□□□□□ -2
CHD9-218ENST00000566029 FAM181BA6NEQ2 426 aa2.54□□□□□ -2
CHD9-218ENST00000566029 OR4C46A6NHA9 309 aa2.54□□□□□ -2
CHD9-218ENST00000566029 LIPT2A6NK58 231 aa2.54□□□□□ -2
CHD9-218ENST00000566029 TMEM14DPA8MWL7 114 aa2.54□□□□□ -2
CHD9-218ENST00000566029 UBE2V1Q13404 147 aa2.54□□□□□ -2
CHD9-218ENST00000566029 TPTE2P1Q5T6R2 138 aa2.54□□□□□ -2
CHD9-218ENST00000566029 CYB561D1Q8N8Q1 229 aa2.54□□□□□ -2
CHD9-218ENST00000566029 ZIC4Q8N9L1 334 aa2.54□□□□□ -2
CHD9-218ENST00000566029 OR51G1Q8NGK1 321 aa2.54□□□□□ -2
CHD9-218ENST00000566029 WFDC5Q8TCV5 224 aa2.54□□□□□ -2
CHD9-218ENST00000566029 TMEM45BQ96B21 275 aa2.54□□□□□ -2
CHD9-218ENST00000566029 IGSF21Q96ID5 467 aa2.54□□□□□ -2
CHD9-218ENST00000566029 C1orf147Q96MC9 270 aaPredicted RBP2.54□□□□□ -2
CHD9-218ENST00000566029 LPAR4Q99677 370 aa2.54□□□□□ -2
CHD9-218ENST00000566029 NXF5Q9H1B4 397 aaKnown RBP2.54□□□□□ -2
CHD9-218ENST00000566029 ZNF703Q9H7S9 590 aaPredicted RBP2.54□□□□□ -2
CHD9-218ENST00000566029 CLDN16Q9Y5I7 305 aa2.54□□□□□ -2
CHD9-218ENST00000566029 A0A1B0GWA3 101 aa2.53□□□□□ -2
CHD9-218ENST00000566029 ZFP92A6NM28 416 aa2.53□□□□□ -2
CHD9-218ENST00000566029 C3orf80F5H4A9 247 aa2.53□□□□□ -2
CHD9-218ENST00000566029 C1QL1O75973 258 aa2.53□□□□□ -2
CHD9-218ENST00000566029 SHBQ15464 509 aa2.53□□□□□ -2
CHD9-218ENST00000566029 TCTN1Q2MV58 587 aa2.53□□□□□ -2
CHD9-218ENST00000566029 LIAT1Q6ZQX7 453 aa2.53□□□□□ -2
CHD9-218ENST00000566029 C16orf82Q7Z2V1 217 aa2.53□□□□□ -2
CHD9-218ENST00000566029 CYYR1Q96J86 154 aa2.53□□□□□ -2
CHD9-218ENST00000566029 P2RX4Q99571 388 aa2.53□□□□□ -2
CHD9-218ENST00000566029 IER3IP1Q9Y5U9 82 aa2.53□□□□□ -2
CHD9-218ENST00000566029 SCN10AQ9Y5Y9 1956 aa2.53□□□□□ -2
CHD9-218ENST00000566029 TRAV27A0A087WT01 109 aa2.53□□□□□ -2
CHD9-218ENST00000566029 A0A0B4J2E0 115 aa2.53□□□□□ -2
CHD9-218ENST00000566029 A0A1B0GX12 115 aa2.53□□□□□ -2
CHD9-218ENST00000566029 SPINK4O60575 86 aa2.53□□□□□ -2
CHD9-218ENST00000566029 GATA3P23771 443 aa2.53□□□□□ -2
CHD9-218ENST00000566029 YPEL3P61236 119 aaPredicted RBP2.53□□□□□ -2
CHD9-218ENST00000566029 GPM6BQ13491 265 aa2.53□□□□□ -2
CHD9-218ENST00000566029 MBNL2Q5VZF2 373 aaKnown RBP2.53□□□□□ -2
CHD9-218ENST00000566029 SLC39A11Q8N1S5 342 aa2.53□□□□□ -2
CHD9-218ENST00000566029 ZNF286AQ9HBT8 521 aa2.53□□□□□ -2
CHD9-218ENST00000566029 CENPVL1A0A0U1RR11 272 aa2.53□□□□□ -2
CHD9-218ENST00000566029 A0A1W2PR48 441 aa2.53□□□□□ -2
CHD9-218ENST00000566029 JTBO76095 146 aa2.53□□□□□ -2
CHD9-218ENST00000566029 LGALS7P47929 136 aa2.53□□□□□ -2
CHD9-218ENST00000566029 NCBP2P52298 156 aaKnown RBP eCLIP2.53□□□□□ -21e-6■■□□□ 12.6
CHD9-218ENST00000566029 CTXN1P60606 82 aa2.53□□□□□ -2
CHD9-218ENST00000566029 MSMO1Q15800 293 aa2.53□□□□□ -2
CHD9-218ENST00000566029 ALKBH6Q3KRA9 238 aa2.53□□□□□ -2
CHD9-218ENST00000566029 FHL5Q5TD97 284 aa2.53□□□□□ -2
CHD9-218ENST00000566029 ZNF880Q6PDB4 577 aa2.53□□□□□ -2
CHD9-218ENST00000566029 TDHQ8IZJ6 230 aa2.53□□□□□ -2
CHD9-218ENST00000566029 OR5AS1Q8N127 324 aa2.53□□□□□ -2
CHD9-218ENST00000566029 ZNF689Q96CS4 500 aaPredicted RBP2.53□□□□□ -2
CHD9-218ENST00000566029 DYNLRB1Q9NP97 96 aa2.53□□□□□ -2
CHD9-218ENST00000566029 ONECUT1Q9UBC0 465 aa2.53□□□□□ -2
CHD9-218ENST00000566029 DOCK4Q8N1I0 1966 aa2.53□□□□□ -2
CHD9-218ENST00000566029 SPINT1O43278 529 aa2.53□□□□□ -2
CHD9-218ENST00000566029 CA2P00918 260 aa2.53□□□□□ -2
CHD9-218ENST00000566029 SRSF6Q13247 344 aaKnown RBP2.53□□□□□ -2
CHD9-218ENST00000566029 PRICKLE4Q2TBC4 344 aa2.53□□□□□ -2
CHD9-218ENST00000566029 TMEM97Q5BJF2 176 aa2.53□□□□□ -2
CHD9-218ENST00000566029 PARS2Q7L3T8 475 aaKnown RBP2.53□□□□□ -2
CHD9-218ENST00000566029 GRINAQ7Z429 371 aa2.53□□□□□ -2
CHD9-218ENST00000566029 SCCPDHQ8NBX0 429 aa2.53□□□□□ -2
CHD9-218ENST00000566029 TMEM116Q8NCL8 245 aa2.53□□□□□ -2
CHD9-218ENST00000566029 OCIAD1Q9NX40 245 aa2.53□□□□□ -2
CHD9-218ENST00000566029 PTPRFP10586 1907 aa2.53□□□□□ -2
CHD9-218ENST00000566029 A0A0G2JLL6 359 aaPredicted RBP2.53□□□□□ -2
CHD9-218ENST00000566029 CGAP01215 116 aa2.53□□□□□ -2
CHD9-218ENST00000566029 EWSR1Q01844 656 aaKnown RBP eCLIP2.53□□□□□ -24e-8■■■□□ 17.8
CHD9-218ENST00000566029 OR1Q1Q15612 314 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms