RNA–Protein interactions for RNA: ENST00000565936.1

LINC01043-201, Transcript of long intergenic non-protein coding RNA 1043, humanhuman

TSL 1 (best) BASIC

Gene LINC01043, Length 6,897 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01043-201ENST00000565936 BMPR1BO00238 502 aa5.61□□□□□ -1.51
LINC01043-201ENST00000565936 GZMKP49863 264 aa5.61□□□□□ -1.51
LINC01043-201ENST00000565936 H3F3CQ6NXT2 135 aa5.61□□□□□ -1.51
LINC01043-201ENST00000565936 TRAV8-7A0A075B6U6 113 aa5.6□□□□□ -1.51
LINC01043-201ENST00000565936 TRBV5-5A0A0J9YX44 114 aa5.6□□□□□ -1.51
LINC01043-201ENST00000565936 SLC31A2O15432 143 aa5.6□□□□□ -1.51
LINC01043-201ENST00000565936 CELA3AP09093 270 aa5.6□□□□□ -1.51
LINC01043-201ENST00000565936 LHX2P50458 406 aa5.6□□□□□ -1.51
LINC01043-201ENST00000565936 SELENOTP62341 195 aa5.6□□□□□ -1.51
LINC01043-201ENST00000565936 ATP5G2Q06055 141 aa5.6□□□□□ -1.51
LINC01043-201ENST00000565936 TEPPQ6URK8 271 aa5.6□□□□□ -1.51
LINC01043-201ENST00000565936 C16orf82Q7Z2V1 217 aa5.6□□□□□ -1.51
LINC01043-201ENST00000565936 ZNF488Q96MN9 340 aa5.6□□□□□ -1.51
LINC01043-201ENST00000565936 FAM206AQ9NX38 181 aa5.6□□□□□ -1.51
LINC01043-201ENST00000565936 KCNE5Q9UJ90 142 aa5.6□□□□□ -1.51
LINC01043-201ENST00000565936 HIGD1AQ9Y241 93 aa5.6□□□□□ -1.51
LINC01043-201ENST00000565936 MAP1LC3B2A6NCE7 125 aa5.6□□□□□ -1.51
LINC01043-201ENST00000565936 OR2T8A6NH00 312 aa5.6□□□□□ -1.51
LINC01043-201ENST00000565936 OR2A4O95047 310 aa5.6□□□□□ -1.51
LINC01043-201ENST00000565936 ACAA1P09110 424 aaPredicted RBP5.6□□□□□ -1.51
LINC01043-201ENST00000565936 REG1BP48304 166 aa5.6□□□□□ -1.51
LINC01043-201ENST00000565936 RPL8P62917 257 aaKnown RBP5.6□□□□□ -1.51
LINC01043-201ENST00000565936 MEF2CQ06413 473 aaPredicted RBP5.6□□□□□ -1.51
LINC01043-201ENST00000565936 SLC35E4Q6ICL7 350 aa5.6□□□□□ -1.51
LINC01043-201ENST00000565936 FDX2Q6P4F2 183 aa5.6□□□□□ -1.51
LINC01043-201ENST00000565936 C10orf111Q8N326 155 aa5.6□□□□□ -1.51
LINC01043-201ENST00000565936 OR4C13Q8NGP0 309 aa5.6□□□□□ -1.51
LINC01043-201ENST00000565936 OR4X1Q8NH49 305 aa5.6□□□□□ -1.51
LINC01043-201ENST00000565936 OR5P3Q8WZ94 311 aa5.6□□□□□ -1.51
LINC01043-201ENST00000565936 OR2A7Q96R45 310 aa5.6□□□□□ -1.51
LINC01043-201ENST00000565936 MAP1LC3BQ9GZQ8 125 aa5.6□□□□□ -1.51
LINC01043-201ENST00000565936 NAGKQ9UJ70 344 aa5.6□□□□□ -1.51
LINC01043-201ENST00000565936 KLHDC2Q9Y2U9 406 aa5.6□□□□□ -1.51
LINC01043-201ENST00000565936 IGHV2OR16-5A0A0B4J2B6 119 aa5.6□□□□□ -1.51
LINC01043-201ENST00000565936 MMP9P14780 707 aa5.6□□□□□ -1.51
LINC01043-201ENST00000565936 ATP5IP56385 69 aaPredicted RBP5.6□□□□□ -1.51
LINC01043-201ENST00000565936 RELQ04864 619 aaPredicted RBP5.6□□□□□ -1.51
LINC01043-201ENST00000565936 RAB32Q13637 225 aa5.6□□□□□ -1.51
LINC01043-201ENST00000565936 PRSS53Q2L4Q9 553 aa5.6□□□□□ -1.51
LINC01043-201ENST00000565936 C9orf106Q8NAJ2 232 aa5.6□□□□□ -1.51
LINC01043-201ENST00000565936 DOK5Q9P104 306 aa5.6□□□□□ -1.51
LINC01043-201ENST00000565936 NUP214P35658 2090 aaPredicted RBP5.6□□□□□ -1.51
LINC01043-201ENST00000565936 G3V3Q6 166 aa5.6□□□□□ -1.51
LINC01043-201ENST00000565936 G6PCP35575 357 aa5.6□□□□□ -1.51
LINC01043-201ENST00000565936 CSRP3P50461 194 aa5.6□□□□□ -1.51
LINC01043-201ENST00000565936 MFAP4P55083 255 aa5.6□□□□□ -1.51
LINC01043-201ENST00000565936 CLDN18P56856 261 aa5.6□□□□□ -1.51
LINC01043-201ENST00000565936 EXOSC2Q13868 293 aaKnown RBP5.6□□□□□ -1.51
LINC01043-201ENST00000565936 SNAI3Q3KNW1 292 aa5.6□□□□□ -1.51
LINC01043-201ENST00000565936 SPINK9Q5DT21 86 aa5.6□□□□□ -1.51
LINC01043-201ENST00000565936 PCNPQ8WW12 178 aaKnown RBP5.6□□□□□ -1.51
LINC01043-201ENST00000565936 CABLES2Q9BTV7 478 aa5.6□□□□□ -1.51
LINC01043-201ENST00000565936 SEC16AO15027 2179 aa5.6□□□□□ -1.51
LINC01043-201ENST00000565936 FAM24AA6NFZ4 105 aa5.6□□□□□ -1.51
LINC01043-201ENST00000565936 NPIPB9F8W1W9 429 aa5.6□□□□□ -1.51
LINC01043-201ENST00000565936 H0Y980 276 aa5.6□□□□□ -1.51
LINC01043-201ENST00000565936 MPC2O95563 127 aa5.6□□□□□ -1.51
LINC01043-201ENST00000565936 IGHV1-2P23083 117 aa5.6□□□□□ -1.51
LINC01043-201ENST00000565936 TMEM33P57088 247 aa5.6□□□□□ -1.51
LINC01043-201ENST00000565936 SPCS3P61009 180 aa5.6□□□□□ -1.51
LINC01043-201ENST00000565936 GUCA2BQ16661 112 aa5.6□□□□□ -1.51
LINC01043-201ENST00000565936 VAX1Q5SQQ9 334 aa5.6□□□□□ -1.51
LINC01043-201ENST00000565936 ABLIM2Q6H8Q1 611 aa5.6□□□□□ -1.51
LINC01043-201ENST00000565936 CLEC18BQ6UXF7 455 aa5.6□□□□□ -1.51
LINC01043-201ENST00000565936 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.6□□□□□ -1.51
LINC01043-201ENST00000565936 ZNF826PQ6ZT77 177 aa5.6□□□□□ -1.51
LINC01043-201ENST00000565936 NRIP2Q9BQI9 281 aa5.6□□□□□ -1.51
LINC01043-201ENST00000565936 AKIRIN1Q9H9L7 192 aaPredicted RBP5.6□□□□□ -1.51
LINC01043-201ENST00000565936 DLL3Q9NYJ7 618 aa5.6□□□□□ -1.51
LINC01043-201ENST00000565936 VSIG4Q9Y279 399 aa5.6□□□□□ -1.51
LINC01043-201ENST00000565936 ZSWIM8A7E2V4 1837 aa5.6□□□□□ -1.51
LINC01043-201ENST00000565936 HAX1O00165 279 aa5.6□□□□□ -1.51
LINC01043-201ENST00000565936 ANKRD55Q3KP44 614 aa5.6□□□□□ -1.51
LINC01043-201ENST00000565936 MYPOPQ86VE0 399 aaPredicted RBP5.6□□□□□ -1.51
LINC01043-201ENST00000565936 MRGPRFQ96AM1 343 aa5.6□□□□□ -1.51
LINC01043-201ENST00000565936 MRPL22Q9NWU5 206 aaKnown RBP5.6□□□□□ -1.51
LINC01043-201ENST00000565936 CLEC5AQ9NY25 188 aa5.6□□□□□ -1.51
LINC01043-201ENST00000565936 C17orf100A8MU93 164 aa5.59□□□□□ -1.51
LINC01043-201ENST00000565936 KLF7O75840 302 aaPredicted RBP5.59□□□□□ -1.51
LINC01043-201ENST00000565936 NBL1P41271 181 aa5.59□□□□□ -1.51
LINC01043-201ENST00000565936 SULT1A1P50225 295 aa5.59□□□□□ -1.51
LINC01043-201ENST00000565936 KLF9Q13886 244 aaPredicted RBP5.59□□□□□ -1.51
LINC01043-201ENST00000565936 UQCC3Q6UW78 93 aa5.59□□□□□ -1.51
LINC01043-201ENST00000565936 SLC24A4Q8NFF2 622 aa5.59□□□□□ -1.51
LINC01043-201ENST00000565936 OR4X2Q8NGF9 303 aa5.59□□□□□ -1.51
LINC01043-201ENST00000565936 MRPL24Q96A35 216 aaKnown RBP5.59□□□□□ -1.51
LINC01043-201ENST00000565936 EEF1AKMT3Q96AZ1 226 aa5.59□□□□□ -1.51
LINC01043-201ENST00000565936 PHYHIPLQ96FC7 376 aa5.59□□□□□ -1.51
LINC01043-201ENST00000565936 M0QZK8 103 aa5.59□□□□□ -1.51
LINC01043-201ENST00000565936 HYPMO75409 117 aa5.59□□□□□ -1.51
LINC01043-201ENST00000565936 SLC6A1P30531 599 aa5.59□□□□□ -1.51
LINC01043-201ENST00000565936 FAM209BQ5JX69 171 aa5.59□□□□□ -1.51
LINC01043-201ENST00000565936 C1orf100Q5SVJ3 147 aa5.59□□□□□ -1.51
LINC01043-201ENST00000565936 LINC00052Q96N35 136 aa5.59□□□□□ -1.51
LINC01043-201ENST00000565936 ZMAT5Q9UDW3 170 aaKnown RBP5.59□□□□□ -1.51
LINC01043-201ENST00000565936 AUP1Q9Y679 476 aa5.59□□□□□ -1.51
LINC01043-201ENST00000565936 CEP290O15078 2479 aa5.59□□□□□ -1.51
LINC01043-201ENST00000565936 ZFC3H1O60293 1989 aaKnown RBP5.59□□□□□ -1.51
LINC01043-201ENST00000565936 A0A0G2JLM5 398 aa5.59□□□□□ -1.51
LINC01043-201ENST00000565936 ERVH48-1M5A8F1 160 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms