RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 FXYD6Q9H0Q3 95 aa9.11□□□□□ -0.95
SF3B3-205ENST00000564899 C20orf85Q9H1P6 137 aa9.11□□□□□ -0.95
SF3B3-205ENST00000564899 LINC00574Q9H8X3 128 aa9.11□□□□□ -0.95
SF3B3-205ENST00000564899 NUDT15Q9NV35 164 aa9.11□□□□□ -0.95
SF3B3-205ENST00000564899 TRAV6A0A075B6T7 132 aa9.1□□□□□ -0.95
SF3B3-205ENST00000564899 ARPC1BO15143 372 aaKnown RBP9.1□□□□□ -0.95
SF3B3-205ENST00000564899 ENSAO43768 121 aaKnown RBP9.1□□□□□ -0.95
SF3B3-205ENST00000564899 FOXH1O75593 365 aa9.1□□□□□ -0.95
SF3B3-205ENST00000564899 LIPFP07098 398 aa9.1□□□□□ -0.95
SF3B3-205ENST00000564899 H2AFB2P0C5Z0 115 aa9.1□□□□□ -0.95
SF3B3-205ENST00000564899 PGAM2P15259 253 aa9.1□□□□□ -0.95
SF3B3-205ENST00000564899 USF1P22415 310 aaPredicted RBP9.1□□□□□ -0.95
SF3B3-205ENST00000564899 NFYBP25208 207 aa9.1□□□□□ -0.95
SF3B3-205ENST00000564899 ZFP36P26651 326 aaKnown RBP9.1□□□□□ -0.95
SF3B3-205ENST00000564899 PPP1CCP36873 323 aaKnown RBP9.1□□□□□ -0.95
SF3B3-205ENST00000564899 ECI1P42126 302 aa9.1□□□□□ -0.95
SF3B3-205ENST00000564899 LCN2P80188 198 aa9.1□□□□□ -0.95
SF3B3-205ENST00000564899 AADACL3Q5VUY0 350 aa9.1□□□□□ -0.95
SF3B3-205ENST00000564899 FAM53AQ6NSI3 398 aaPredicted RBP9.1□□□□□ -0.95
SF3B3-205ENST00000564899 HEPN1Q6WQI6 88 aa9.1□□□□□ -0.95
SF3B3-205ENST00000564899 ZDHHC22Q8N966 263 aa9.1□□□□□ -0.95
SF3B3-205ENST00000564899 OR10A7Q8NGE5 316 aa9.1□□□□□ -0.95
SF3B3-205ENST00000564899 MARCH1Q8TCQ1 289 aa9.1□□□□□ -0.95
SF3B3-205ENST00000564899 TOMM40LQ969M1 308 aa9.1□□□□□ -0.95
SF3B3-205ENST00000564899 SCGB3A2Q96PL1 93 aa9.1□□□□□ -0.95
SF3B3-205ENST00000564899 TOLLIPQ9H0E2 274 aa9.1□□□□□ -0.95
SF3B3-205ENST00000564899 PARP12Q9H0J9 701 aaKnown RBP9.1□□□□□ -0.95
SF3B3-205ENST00000564899 GFOD1Q9NXC2 390 aa9.1□□□□□ -0.95
SF3B3-205ENST00000564899 RDH8Q9NYR8 311 aa9.1□□□□□ -0.95
SF3B3-205ENST00000564899 ONECUT1Q9UBC0 465 aa9.1□□□□□ -0.95
SF3B3-205ENST00000564899 FLVCR2Q9UPI3 526 aa9.1□□□□□ -0.95
SF3B3-205ENST00000564899 OR2W1Q9Y3N9 320 aa9.1□□□□□ -0.95
SF3B3-205ENST00000564899 MALRD1Q5VYJ5 2156 aa9.1□□□□□ -0.95
SF3B3-205ENST00000564899 C17orf98A8MV24 154 aa9.09□□□□□ -0.95
SF3B3-205ENST00000564899 FAM157AC9JC47 383 aa9.09□□□□□ -0.95
SF3B3-205ENST00000564899 INMT-MINDY4F8WBC2 141 aa9.09□□□□□ -0.95
SF3B3-205ENST00000564899 YPEL1O60688 119 aa9.09□□□□□ -0.95
SF3B3-205ENST00000564899 MMP23AO75900 390 aa9.09□□□□□ -0.95
SF3B3-205ENST00000564899 RGS11O94810 467 aa9.09□□□□□ -0.95
SF3B3-205ENST00000564899 RLN1P04808 185 aa9.09□□□□□ -0.95
SF3B3-205ENST00000564899 RAB25P57735 213 aa9.09□□□□□ -0.95
SF3B3-205ENST00000564899 LOXL3P58215 753 aa9.09□□□□□ -0.95
SF3B3-205ENST00000564899 ERVFRD-1P60508 538 aa9.09□□□□□ -0.95
SF3B3-205ENST00000564899 SURF2Q15527 256 aaPredicted RBP9.09□□□□□ -0.95
SF3B3-205ENST00000564899 TMED4Q7Z7H5 227 aa9.09□□□□□ -0.95
SF3B3-205ENST00000564899 OR52M1Q8NGK5 317 aa9.09□□□□□ -0.95
SF3B3-205ENST00000564899 SECTM1Q8WVN6 248 aa9.09□□□□□ -0.95
SF3B3-205ENST00000564899 YPEL2Q96QA6 119 aa9.09□□□□□ -0.95
SF3B3-205ENST00000564899 LPAR2Q9HBW0 351 aa9.09□□□□□ -0.95
SF3B3-205ENST00000564899 VSIG4Q9Y279 399 aa9.09□□□□□ -0.95
SF3B3-205ENST00000564899 RBM7Q9Y580 266 aaKnown RBP9.09□□□□□ -0.95
SF3B3-205ENST00000564899 A0A096LNT2 108 aa9.08□□□□□ -0.96
SF3B3-205ENST00000564899 IGKV1D-13A0A0B4J2D9 117 aa9.08□□□□□ -0.96
SF3B3-205ENST00000564899 IGHV2-70DA0A0C4DH43 119 aa9.08□□□□□ -0.96
SF3B3-205ENST00000564899 hCG_1809904A0A1W2PP81 198 aa9.08□□□□□ -0.96
SF3B3-205ENST00000564899 A0A1W2PPE2 198 aa9.08□□□□□ -0.96
SF3B3-205ENST00000564899 A0A1W2PR64 198 aa9.08□□□□□ -0.96
SF3B3-205ENST00000564899 A0A1W2PRV1 198 aa9.08□□□□□ -0.96
SF3B3-205ENST00000564899 RBP4P02753 201 aa9.08□□□□□ -0.96
SF3B3-205ENST00000564899 IGHV1-8P0DP01 117 aa9.08□□□□□ -0.96
SF3B3-205ENST00000564899 IGKV1-13P0DP09 117 aa9.08□□□□□ -0.96
SF3B3-205ENST00000564899 ANXA7P20073 488 aaKnown RBP9.08□□□□□ -0.96
SF3B3-205ENST00000564899 LUMP51884 338 aaPredicted RBP9.08□□□□□ -0.96
SF3B3-205ENST00000564899 UCP3P55916 312 aa9.08□□□□□ -0.96
SF3B3-205ENST00000564899 BAMBIQ13145 260 aa9.08□□□□□ -0.96
SF3B3-205ENST00000564899 Q6ZNX1 250 aa9.08□□□□□ -0.96
SF3B3-205ENST00000564899 SLC38A6Q8IZM9 456 aa9.08□□□□□ -0.96
SF3B3-205ENST00000564899 KIR3DL3Q8N743 410 aa9.08□□□□□ -0.96
SF3B3-205ENST00000564899 OR2AK2Q8NG84 335 aa9.08□□□□□ -0.96
SF3B3-205ENST00000564899 EDARADDQ8WWZ3 215 aa9.08□□□□□ -0.96
SF3B3-205ENST00000564899 TMEM158Q8WZ71 300 aa9.08□□□□□ -0.96
SF3B3-205ENST00000564899 LEAP2Q969E1 77 aa9.08□□□□□ -0.96
SF3B3-205ENST00000564899 MARVELD1Q9BSK0 173 aa9.08□□□□□ -0.96
SF3B3-205ENST00000564899 SUCNR1Q9BXA5 334 aa9.08□□□□□ -0.96
SF3B3-205ENST00000564899 SLC5A7Q9GZV3 580 aa9.08□□□□□ -0.96
SF3B3-205ENST00000564899 YAE1D1Q9NRH1 226 aa9.08□□□□□ -0.96
SF3B3-205ENST00000564899 KCNS2Q9ULS6 477 aa9.08□□□□□ -0.96
SF3B3-205ENST00000564899 C14orf166Q9Y224 244 aaKnown RBP9.08□□□□□ -0.96
SF3B3-205ENST00000564899 SESN1Q9Y6P5 492 aa9.08□□□□□ -0.96
SF3B3-205ENST00000564899 VGLL3A8MV65 326 aa9.07□□□□□ -0.96
SF3B3-205ENST00000564899 M0R1W7 72 aa9.07□□□□□ -0.96
SF3B3-205ENST00000564899 HSD17B6O14756 317 aa9.07□□□□□ -0.96
SF3B3-205ENST00000564899 PEX14O75381 377 aa9.07□□□□□ -0.96
SF3B3-205ENST00000564899 DHFRP00374 187 aa9.07□□□□□ -0.96
SF3B3-205ENST00000564899 IGHV3-7P01780 117 aa9.07□□□□□ -0.96
SF3B3-205ENST00000564899 CTSDP07339 412 aaPredicted RBP9.07□□□□□ -0.96
SF3B3-205ENST00000564899 OR8U9P0C7N5 309 aa9.07□□□□□ -0.96
SF3B3-205ENST00000564899 PI3P19957 117 aa9.07□□□□□ -0.96
SF3B3-205ENST00000564899 GNG10P50151 68 aa9.07□□□□□ -0.96
SF3B3-205ENST00000564899 RAG2P55895 527 aa9.07□□□□□ -0.96
SF3B3-205ENST00000564899 ARF6P62330 175 aa9.07□□□□□ -0.96
SF3B3-205ENST00000564899 PAX2Q02962 417 aa9.07□□□□□ -0.96
SF3B3-205ENST00000564899 LOXL1Q08397 574 aaPredicted RBP9.07□□□□□ -0.96
SF3B3-205ENST00000564899 ABCA11PQ4W5N1 156 aa9.07□□□□□ -0.96
SF3B3-205ENST00000564899 MORN2Q502X0 79 aa9.07□□□□□ -0.96
SF3B3-205ENST00000564899 LPCAT3Q6P1A2 487 aa9.07□□□□□ -0.96
SF3B3-205ENST00000564899 BTNL3Q6UXE8 466 aa9.07□□□□□ -0.96
SF3B3-205ENST00000564899 LDLRAD3Q86YD5 345 aa9.07□□□□□ -0.96
SF3B3-205ENST00000564899 C11orf42Q8N5U0 333 aa9.07□□□□□ -0.96
SF3B3-205ENST00000564899 OR8U1Q8NH10 309 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms