RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 LY6G6FQ5SQ64 297 aa12.9□□□□□ -0.34
RAB40C-208ENST00000564703 TMEM69Q5SWH9 247 aa12.9□□□□□ -0.34
RAB40C-208ENST00000564703 FAM53AQ6NSI3 398 aaPredicted RBP12.9□□□□□ -0.34
RAB40C-208ENST00000564703 SLC25A48Q6ZT89 311 aaKnown RBP12.9□□□□□ -0.34
RAB40C-208ENST00000564703 LYG1Q8N1E2 194 aa12.9□□□□□ -0.34
RAB40C-208ENST00000564703 OR2AK2Q8NG84 335 aa12.9□□□□□ -0.34
RAB40C-208ENST00000564703 CT45A3Q8NHU0 189 aa12.9□□□□□ -0.34
RAB40C-208ENST00000564703 MDFIQ99750 246 aa12.9□□□□□ -0.34
RAB40C-208ENST00000564703 ELF5Q9UKW6 265 aaPredicted RBP12.9□□□□□ -0.34
RAB40C-208ENST00000564703 GSTT2P0CG29 244 aa12.89□□□□□ -0.35
RAB40C-208ENST00000564703 GSTT2BP0CG30 244 aa12.89□□□□□ -0.35
RAB40C-208ENST00000564703 FAM106CPP0CH98 169 aa12.89□□□□□ -0.35
RAB40C-208ENST00000564703 ZNF134P52741 427 aa12.89□□□□□ -0.35
RAB40C-208ENST00000564703 FOXL1Q12952 345 aa12.89□□□□□ -0.35
RAB40C-208ENST00000564703 GNMTQ14749 295 aa12.89□□□□□ -0.35
RAB40C-208ENST00000564703 LIAT1Q6ZQX7 453 aa12.89□□□□□ -0.35
RAB40C-208ENST00000564703 OR8H3Q8N146 312 aa12.89□□□□□ -0.35
RAB40C-208ENST00000564703 DTX3Q8N9I9 347 aa12.89□□□□□ -0.35
RAB40C-208ENST00000564703 OR10J5Q8NHC4 309 aa12.89□□□□□ -0.35
RAB40C-208ENST00000564703 NUDCD2Q8WVJ2 157 aa12.89□□□□□ -0.35
RAB40C-208ENST00000564703 CAPSLQ8WWF8 208 aa12.89□□□□□ -0.35
RAB40C-208ENST00000564703 EDARADDQ8WWZ3 215 aa12.89□□□□□ -0.35
RAB40C-208ENST00000564703 MAFIPQ8WZ33 124 aa12.89□□□□□ -0.35
RAB40C-208ENST00000564703 ISOC1Q96CN7 298 aa12.89□□□□□ -0.35
RAB40C-208ENST00000564703 ABHD14AQ9BUJ0 271 aa12.89□□□□□ -0.35
RAB40C-208ENST00000564703 AUNIPQ9H7T9 357 aa12.89□□□□□ -0.35
RAB40C-208ENST00000564703 MRPS7Q9Y2R9 242 aaKnown RBP12.89□□□□□ -0.35
RAB40C-208ENST00000564703 HSD17B6O14756 317 aa12.88□□□□□ -0.35
RAB40C-208ENST00000564703 BET1O15155 118 aa12.88□□□□□ -0.35
RAB40C-208ENST00000564703 RGS5O15539 181 aa12.88□□□□□ -0.35
RAB40C-208ENST00000564703 HPGDSO60760 199 aa12.88□□□□□ -0.35
RAB40C-208ENST00000564703 CTXN2P0C2S0 81 aa12.88□□□□□ -0.35
RAB40C-208ENST00000564703 CBX5P45973 191 aa12.88□□□□□ -0.35
RAB40C-208ENST00000564703 DHRS7BQ6IAN0 325 aaPredicted RBP12.88□□□□□ -0.35
RAB40C-208ENST00000564703 Q6ZPA2 131 aa12.88□□□□□ -0.35
RAB40C-208ENST00000564703 Q6ZS49 121 aa12.88□□□□□ -0.35
RAB40C-208ENST00000564703 MOB3BQ86TA1 216 aa12.88□□□□□ -0.35
RAB40C-208ENST00000564703 ZNF439Q8NDP4 499 aa12.88□□□□□ -0.35
RAB40C-208ENST00000564703 PIFOQ8TCI5 191 aa12.88□□□□□ -0.35
RAB40C-208ENST00000564703 GINS4Q9BRT9 223 aa12.88□□□□□ -0.35
RAB40C-208ENST00000564703 GHITMQ9H3K2 345 aa12.88□□□□□ -0.35
RAB40C-208ENST00000564703 CEPT1Q9Y6K0 416 aa12.88□□□□□ -0.35
RAB40C-208ENST00000564703 H3BMQ9 156 aa12.87□□□□□ -0.35
RAB40C-208ENST00000564703 SLC31A2O15432 143 aa12.87□□□□□ -0.35
RAB40C-208ENST00000564703 TXNL1O43396 289 aa12.87□□□□□ -0.35
RAB40C-208ENST00000564703 DIRAS3O95661 229 aa12.87□□□□□ -0.35
RAB40C-208ENST00000564703 HKR1P10072 659 aa12.87□□□□□ -0.35
RAB40C-208ENST00000564703 TGIF2LXQ8IUE1 241 aa12.87□□□□□ -0.35
RAB40C-208ENST00000564703 AKR1E2Q96JD6 320 aa12.87□□□□□ -0.35
RAB40C-208ENST00000564703 S1PR3Q99500 378 aa12.87□□□□□ -0.35
RAB40C-208ENST00000564703 PIPOXQ9P0Z9 390 aa12.87□□□□□ -0.35
RAB40C-208ENST00000564703 ADAM30Q9UKF2 790 aa12.87□□□□□ -0.35
RAB40C-208ENST00000564703 TCF19Q9Y242 345 aa12.87□□□□□ -0.35
RAB40C-208ENST00000564703 RBM7Q9Y580 266 aaKnown RBP12.87□□□□□ -0.35
RAB40C-208ENST00000564703 TMEM89A2RUT3 159 aa12.86□□□□□ -0.35
RAB40C-208ENST00000564703 ITGB1BP1O14713 200 aa12.86□□□□□ -0.35
RAB40C-208ENST00000564703 TIMM23O14925 209 aa12.86□□□□□ -0.35
RAB40C-208ENST00000564703 RAB29O14966 203 aa12.86□□□□□ -0.35
RAB40C-208ENST00000564703 EIF4EP06730 217 aaKnown RBP12.86□□□□□ -0.35
RAB40C-208ENST00000564703 ELK1P19419 428 aa12.86□□□□□ -0.35
RAB40C-208ENST00000564703 PRSS3P35030 304 aa12.86□□□□□ -0.35
RAB40C-208ENST00000564703 REG1BP48304 166 aa12.86□□□□□ -0.35
RAB40C-208ENST00000564703 TAS2R20P59543 309 aa12.86□□□□□ -0.35
RAB40C-208ENST00000564703 ZNF816Q0VGE8 651 aaPredicted RBP12.86□□□□□ -0.35
RAB40C-208ENST00000564703 HES1Q14469 280 aa12.86□□□□□ -0.35
RAB40C-208ENST00000564703 IGSF11Q5DX21 431 aa12.86□□□□□ -0.35
RAB40C-208ENST00000564703 C12orf54Q6X4T0 127 aa12.86□□□□□ -0.35
RAB40C-208ENST00000564703 THNSL2Q86YJ6 484 aa12.86□□□□□ -0.35
RAB40C-208ENST00000564703 OR4F5Q8NH21 305 aa12.86□□□□□ -0.35
RAB40C-208ENST00000564703 IFT46Q9NQC8 304 aa12.86□□□□□ -0.35
RAB40C-208ENST00000564703 RDH8Q9NYR8 311 aa12.86□□□□□ -0.35
RAB40C-208ENST00000564703 OR1A1Q9P1Q5 309 aa12.86□□□□□ -0.35
RAB40C-208ENST00000564703 RSL24D1Q9UHA3 163 aaKnown RBP12.86□□□□□ -0.35
RAB40C-208ENST00000564703 ZNF221Q9UK13 617 aa12.86□□□□□ -0.35
RAB40C-208ENST00000564703 IGHV1-3A0A0C4DH29 117 aa12.85□□□□□ -0.35
RAB40C-208ENST00000564703 A6NDX4 124 aa12.85□□□□□ -0.35
RAB40C-208ENST00000564703 SSX5O60225 188 aa12.85□□□□□ -0.35
RAB40C-208ENST00000564703 CD24P25063 80 aa12.85□□□□□ -0.35
RAB40C-208ENST00000564703 ARPC4P59998 168 aa12.85□□□□□ -0.35
RAB40C-208ENST00000564703 DIAPH2-AS1Q14236 149 aa12.85□□□□□ -0.35
RAB40C-208ENST00000564703 CNIH2Q6PI25 160 aa12.85□□□□□ -0.35
RAB40C-208ENST00000564703 DRAM1Q8N682 238 aa12.85□□□□□ -0.35
RAB40C-208ENST00000564703 BEST4Q8NFU0 473 aa12.85□□□□□ -0.35
RAB40C-208ENST00000564703 OR56B4Q8NH76 319 aa12.85□□□□□ -0.35
RAB40C-208ENST00000564703 DYNC2LI1Q8TCX1 351 aa12.85□□□□□ -0.35
RAB40C-208ENST00000564703 C15orf40Q8WUR7 153 aa12.85□□□□□ -0.35
RAB40C-208ENST00000564703 RTN4IP1Q8WWV3 396 aaPredicted RBP12.85□□□□□ -0.35
RAB40C-208ENST00000564703 ST6GALNAC6Q969X2 333 aa12.85□□□□□ -0.35
RAB40C-208ENST00000564703 NPFFR1Q9GZQ6 430 aa12.85□□□□□ -0.35
RAB40C-208ENST00000564703 C11orf54Q9H0W9 315 aaPredicted RBP12.85□□□□□ -0.35
RAB40C-208ENST00000564703 BEX1Q9HBH7 125 aa12.85□□□□□ -0.35
RAB40C-208ENST00000564703 C1RLQ9NZP8 487 aa12.85□□□□□ -0.35
RAB40C-208ENST00000564703 CCDC59Q9P031 241 aaKnown RBP12.85□□□□□ -0.35
RAB40C-208ENST00000564703 NDUFA13Q9P0J0 144 aa12.85□□□□□ -0.35
RAB40C-208ENST00000564703 ANXA10Q9UJ72 324 aa12.85□□□□□ -0.35
RAB40C-208ENST00000564703 TRBV6-7A0A0A0MS04 114 aa12.84□□□□□ -0.35
RAB40C-208ENST00000564703 IGKV1-6A0A0C4DH72 117 aa12.84□□□□□ -0.35
RAB40C-208ENST00000564703 A0A1B0GUS0 222 aa12.84□□□□□ -0.35
RAB40C-208ENST00000564703 ST8SIA5O15466 376 aa12.84□□□□□ -0.35
RAB40C-208ENST00000564703 LANCL1O43813 399 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms