RNA–Protein interactions for RNA: ENST00000564678.1

HERPUD1-209, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 2,199 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-209ENST00000564678 TAAR6Q96RI8 345 aa6.13□□□□□ -1.43
HERPUD1-209ENST00000564678 C1QTNF6Q9BXI9 259 aa6.13□□□□□ -1.43
HERPUD1-209ENST00000564678 HES4Q9HCC6 221 aa6.13□□□□□ -1.43
HERPUD1-209ENST00000564678 MBNL3Q9NUK0 354 aaKnown RBP6.13□□□□□ -1.43
HERPUD1-209ENST00000564678 PURGQ9UJV8 347 aaKnown RBP6.13□□□□□ -1.43
HERPUD1-209ENST00000564678 WIPI2Q9Y4P8 454 aa6.13□□□□□ -1.43
HERPUD1-209ENST00000564678 LSM5Q9Y4Y9 91 aaKnown RBP6.13□□□□□ -1.43
HERPUD1-209ENST00000564678 ASPMQ8IZT6 3477 aa6.12□□□□□ -1.43
HERPUD1-209ENST00000564678 CNOT1A5YKK6 2376 aaKnown RBP6.12□□□□□ -1.43
HERPUD1-209ENST00000564678 A0A1B0GWJ7 208 aa6.12□□□□□ -1.43
HERPUD1-209ENST00000564678 A0A1W2PR80 420 aa6.12□□□□□ -1.43
HERPUD1-209ENST00000564678 ZSCAN5BA6NJL1 495 aa6.12□□□□□ -1.43
HERPUD1-209ENST00000564678 OR5H1A6NKK0 313 aa6.12□□□□□ -1.43
HERPUD1-209ENST00000564678 F8W735 103 aaPredicted RBP6.12□□□□□ -1.43
HERPUD1-209ENST00000564678 H0Y980 276 aa6.12□□□□□ -1.43
HERPUD1-209ENST00000564678 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.12□□□□□ -1.43
HERPUD1-209ENST00000564678 LGALS8O00214 317 aa6.12□□□□□ -1.43
HERPUD1-209ENST00000564678 CDIPTO14735 213 aa6.12□□□□□ -1.43
HERPUD1-209ENST00000564678 WISP2O76076 250 aa6.12□□□□□ -1.43
HERPUD1-209ENST00000564678 NXPH2O95156 264 aa6.12□□□□□ -1.43
HERPUD1-209ENST00000564678 OR2H2O95918 312 aa6.12□□□□□ -1.43
HERPUD1-209ENST00000564678 CRYABP02511 175 aaKnown RBP6.12□□□□□ -1.43
HERPUD1-209ENST00000564678 HOXD4P09016 255 aaPredicted RBP6.12□□□□□ -1.43
HERPUD1-209ENST00000564678 SLC25A6P12236 298 aa6.12□□□□□ -1.43
HERPUD1-209ENST00000564678 VDAC1P21796 283 aa6.12□□□□□ -1.43
HERPUD1-209ENST00000564678 ADMP35318 185 aa6.12□□□□□ -1.43
HERPUD1-209ENST00000564678 BLOC1S1P78537 153 aa6.12□□□□□ -1.43
HERPUD1-209ENST00000564678 FBLN7Q53RD9 439 aa6.12□□□□□ -1.43
HERPUD1-209ENST00000564678 TMEM268Q5VZI3 342 aa6.12□□□□□ -1.43
HERPUD1-209ENST00000564678 CLEC9AQ6UXN8 241 aa6.12□□□□□ -1.43
HERPUD1-209ENST00000564678 IL34Q6ZMJ4 242 aa6.12□□□□□ -1.43
HERPUD1-209ENST00000564678 FOXRED2Q8IWF2 684 aa6.12□□□□□ -1.43
HERPUD1-209ENST00000564678 SELENOHQ8IZQ5 122 aaKnown RBP6.12□□□□□ -1.43
HERPUD1-209ENST00000564678 PRSS33Q8NF86 280 aa6.12□□□□□ -1.43
HERPUD1-209ENST00000564678 OR5D13Q8NGL4 314 aa6.12□□□□□ -1.43
HERPUD1-209ENST00000564678 LHFPL5Q8TAF8 219 aa6.12□□□□□ -1.43
HERPUD1-209ENST00000564678 TMED6Q8WW62 240 aa6.12□□□□□ -1.43
HERPUD1-209ENST00000564678 NPIPB3Q92617 1050 aa6.12□□□□□ -1.43
HERPUD1-209ENST00000564678 ARL11Q969Q4 196 aa6.12□□□□□ -1.43
HERPUD1-209ENST00000564678 CCDC120Q96HB5 630 aa6.12□□□□□ -1.43
HERPUD1-209ENST00000564678 SMIM8Q96KF7 97 aa6.12□□□□□ -1.43
HERPUD1-209ENST00000564678 TLNRD1Q9H1K6 362 aa6.12□□□□□ -1.43
HERPUD1-209ENST00000564678 CXXC4Q9H2H0 198 aa6.12□□□□□ -1.43
HERPUD1-209ENST00000564678 OR2S2Q9NQN1 319 aa6.12□□□□□ -1.43
HERPUD1-209ENST00000564678 BORCS7-ASMTA0A0B4J1R7 106 aa6.11□□□□□ -1.43
HERPUD1-209ENST00000564678 IGKV1D-13A0A0B4J2D9 117 aa6.11□□□□□ -1.43
HERPUD1-209ENST00000564678 HSPB6O14558 160 aa6.11□□□□□ -1.43
HERPUD1-209ENST00000564678 PGLYRP1O75594 196 aaPredicted RBP6.11□□□□□ -1.43
HERPUD1-209ENST00000564678 AGFG2O95081 481 aa6.11□□□□□ -1.43
HERPUD1-209ENST00000564678 IGKV1-13P0DP09 117 aa6.11□□□□□ -1.43
HERPUD1-209ENST00000564678 MMP9P14780 707 aa6.11□□□□□ -1.43
HERPUD1-209ENST00000564678 RCC1P18754 421 aaPredicted RBP6.11□□□□□ -1.43
HERPUD1-209ENST00000564678 PVALBP20472 110 aaPredicted RBP6.11□□□□□ -1.43
HERPUD1-209ENST00000564678 F2RP25116 425 aa6.11□□□□□ -1.43
HERPUD1-209ENST00000564678 TIMP3P35625 211 aa6.11□□□□□ -1.43
HERPUD1-209ENST00000564678 SULT1A2P50226 295 aa6.11□□□□□ -1.43
HERPUD1-209ENST00000564678 ERVS71-1P61550 626 aa6.11□□□□□ -1.43
HERPUD1-209ENST00000564678 FOXF2Q12947 444 aa6.11□□□□□ -1.43
HERPUD1-209ENST00000564678 C1orf185Q5T7R7 199 aa6.11□□□□□ -1.43
HERPUD1-209ENST00000564678 RPL7L1Q6DKI1 246 aaKnown RBP6.11□□□□□ -1.43
HERPUD1-209ENST00000564678 OR1S2Q8NGQ3 325 aa6.11□□□□□ -1.43
HERPUD1-209ENST00000564678 MRPL18Q9H0U6 180 aaKnown RBP6.11□□□□□ -1.43
HERPUD1-209ENST00000564678 ARV1Q9H2C2 271 aa6.11□□□□□ -1.43
HERPUD1-209ENST00000564678 MMP26Q9NRE1 261 aa6.11□□□□□ -1.43
HERPUD1-209ENST00000564678 CCL28Q9NRJ3 127 aa6.11□□□□□ -1.43
HERPUD1-209ENST00000564678 TAAR3PQ9P1P4 343 aa6.11□□□□□ -1.43
HERPUD1-209ENST00000564678 INTS1Q8N201 2190 aaKnown RBP6.11□□□□□ -1.43
HERPUD1-209ENST00000564678 HEXAP06865 529 aa6.11□□□□□ -1.43
HERPUD1-209ENST00000564678 SEC11BP0C7V7 166 aa6.11□□□□□ -1.43
HERPUD1-209ENST00000564678 CECR9P0C854 216 aa6.11□□□□□ -1.43
HERPUD1-209ENST00000564678 MPV17P39210 176 aa6.11□□□□□ -1.43
HERPUD1-209ENST00000564678 NKX2-1P43699 371 aaPredicted RBP6.11□□□□□ -1.43
HERPUD1-209ENST00000564678 ALKBH6Q3KRA9 238 aa6.11□□□□□ -1.43
HERPUD1-209ENST00000564678 BHLHA15Q7RTS1 189 aaPredicted RBP6.11□□□□□ -1.43
HERPUD1-209ENST00000564678 OR10V1Q8NGI7 309 aa6.11□□□□□ -1.43
HERPUD1-209ENST00000564678 SEBOXQ9HB31 216 aaPredicted RBP6.11□□□□□ -1.43
HERPUD1-209ENST00000564678 ERRFI1Q9UJM3 462 aaPredicted RBP6.11□□□□□ -1.43
HERPUD1-209ENST00000564678 TRAPPC2LQ9UL33 140 aa6.11□□□□□ -1.43
HERPUD1-209ENST00000564678 IGHV2OR16-5A0A0B4J2B6 119 aa6.1□□□□□ -1.43
HERPUD1-209ENST00000564678 IGHV1-18A0A0C4DH31 117 aa6.1□□□□□ -1.43
HERPUD1-209ENST00000564678 ZNF705EA8MWA4 302 aaPredicted RBP6.1□□□□□ -1.43
HERPUD1-209ENST00000564678 HSD17B6O14756 317 aa6.1□□□□□ -1.43
HERPUD1-209ENST00000564678 MLNRO43193 412 aa6.1□□□□□ -1.43
HERPUD1-209ENST00000564678 CD200P41217 278 aa6.1□□□□□ -1.43
HERPUD1-209ENST00000564678 PJVKQ0ZLH3 352 aa6.1□□□□□ -1.43
HERPUD1-209ENST00000564678 HMGN3Q15651 99 aa6.1□□□□□ -1.43
HERPUD1-209ENST00000564678 NMSQ5H8A3 153 aa6.1□□□□□ -1.43
HERPUD1-209ENST00000564678 TIMM23BQ5SRD1 257 aa6.1□□□□□ -1.43
HERPUD1-209ENST00000564678 SLC35E4Q6ICL7 350 aa6.1□□□□□ -1.43
HERPUD1-209ENST00000564678 C11orf53Q8IXP5 236 aa6.1□□□□□ -1.43
HERPUD1-209ENST00000564678 DMBX1Q8NFW5 382 aa6.1□□□□□ -1.43
HERPUD1-209ENST00000564678 SLC25A31Q9H0C2 315 aa6.1□□□□□ -1.43
HERPUD1-209ENST00000564678 TOLLIPQ9H0E2 274 aa6.1□□□□□ -1.43
HERPUD1-209ENST00000564678 C11orf1Q9H5F2 150 aa6.1□□□□□ -1.43
HERPUD1-209ENST00000564678 PARP11Q9NR21 331 aa6.1□□□□□ -1.43
HERPUD1-209ENST00000564678 FAM212BQ9NTI7 297 aaPredicted RBP6.1□□□□□ -1.43
HERPUD1-209ENST00000564678 SLC25A15Q9Y619 301 aa6.1□□□□□ -1.43
HERPUD1-209ENST00000564678 ARID1AO14497 2285 aa6.1□□□□□ -1.43
HERPUD1-209ENST00000564678 A0A1B0GU03 582 aa6.1□□□□□ -1.43
HERPUD1-209ENST00000564678 TMEM218A2RU14 115 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms