RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 C4orf3Q8WVX3 66 aa9.55□□□□□ -0.88
GTF3C1-204ENST00000564664 ZNF251Q9BRH9 671 aa9.55□□□□□ -0.88
GTF3C1-204ENST00000564664 STEAP1Q9UHE8 339 aa9.55□□□□□ -0.88
GTF3C1-204ENST00000564664 ZNF107Q9UII5 783 aaPredicted RBP9.55□□□□□ -0.88
GTF3C1-204ENST00000564664 ITGB1BP1O14713 200 aa9.54□□□□□ -0.88
GTF3C1-204ENST00000564664 HLA-DRB1P01911 266 aa9.54□□□□□ -0.88
GTF3C1-204ENST00000564664 NHLRC4P0CG21 123 aaPredicted RBP9.54□□□□□ -0.88
GTF3C1-204ENST00000564664 VSIG8P0DPA2 414 aa9.54□□□□□ -0.88
GTF3C1-204ENST00000564664 CHATP28329 748 aa9.54□□□□□ -0.88
GTF3C1-204ENST00000564664 RPS27AP62979 156 aaKnown RBP9.54□□□□□ -0.88
GTF3C1-204ENST00000564664 CD69Q07108 199 aa9.54□□□□□ -0.88
GTF3C1-204ENST00000564664 SPHARQ15513 63 aa9.54□□□□□ -0.88
GTF3C1-204ENST00000564664 MMDQ15546 238 aa9.54□□□□□ -0.88
GTF3C1-204ENST00000564664 C9orf66Q5T8R8 295 aa9.54□□□□□ -0.88
GTF3C1-204ENST00000564664 TMEM65Q6PI78 240 aa9.54□□□□□ -0.88
GTF3C1-204ENST00000564664 ZNF833PQ6ZTB9 187 aa9.54□□□□□ -0.88
GTF3C1-204ENST00000564664 ODF3L1Q8IXM7 274 aa9.54□□□□□ -0.88
GTF3C1-204ENST00000564664 OR2AK2Q8NG84 335 aa9.54□□□□□ -0.88
GTF3C1-204ENST00000564664 OR52L2PQ8NGH6 319 aa9.54□□□□□ -0.88
GTF3C1-204ENST00000564664 UBE2E2Q96LR5 201 aa9.54□□□□□ -0.88
GTF3C1-204ENST00000564664 KCTD7Q96MP8 289 aa9.54□□□□□ -0.88
GTF3C1-204ENST00000564664 TM2D1Q9BX74 207 aa9.54□□□□□ -0.88
GTF3C1-204ENST00000564664 TMEM59Q9BXS4 323 aa9.54□□□□□ -0.88
GTF3C1-204ENST00000564664 SCN3BQ9NY72 215 aa9.54□□□□□ -0.88
GTF3C1-204ENST00000564664 PIPOXQ9P0Z9 390 aa9.54□□□□□ -0.88
GTF3C1-204ENST00000564664 MGAT4AQ9UM21 535 aa9.54□□□□□ -0.88
GTF3C1-204ENST00000564664 TRBV6-6A0A0A6YYG2 114 aa9.53□□□□□ -0.88
GTF3C1-204ENST00000564664 RAB29O14966 203 aa9.53□□□□□ -0.88
GTF3C1-204ENST00000564664 ATP6V1G2O95670 118 aa9.53□□□□□ -0.88
GTF3C1-204ENST00000564664 HTR2CP28335 458 aa9.53□□□□□ -0.88
GTF3C1-204ENST00000564664 PPIFP30405 207 aaKnown RBP9.53□□□□□ -0.88
GTF3C1-204ENST00000564664 MC5RP33032 325 aa9.53□□□□□ -0.88
GTF3C1-204ENST00000564664 PPP1CCP36873 323 aaKnown RBP9.53□□□□□ -0.88
GTF3C1-204ENST00000564664 INSL3P51460 131 aa9.53□□□□□ -0.88
GTF3C1-204ENST00000564664 ACTBP60709 375 aa9.53□□□□□ -0.88
GTF3C1-204ENST00000564664 RUNX1Q01196 453 aa9.53□□□□□ -0.88
GTF3C1-204ENST00000564664 TRAM1Q15629 374 aa9.53□□□□□ -0.88
GTF3C1-204ENST00000564664 HMGN3Q15651 99 aa9.53□□□□□ -0.88
GTF3C1-204ENST00000564664 NKAPLQ5M9Q1 402 aa9.53□□□□□ -0.88
GTF3C1-204ENST00000564664 LIN54Q6MZP7 749 aa9.53□□□□□ -0.88
GTF3C1-204ENST00000564664 ZNF880Q6PDB4 577 aa9.53□□□□□ -0.88
GTF3C1-204ENST00000564664 MOB1BQ7L9L4 216 aa9.53□□□□□ -0.88
GTF3C1-204ENST00000564664 CEACAM19Q7Z692 300 aa9.53□□□□□ -0.88
GTF3C1-204ENST00000564664 LRRTM1Q86UE6 522 aa9.53□□□□□ -0.88
GTF3C1-204ENST00000564664 NPBQ8NG41 125 aa9.53□□□□□ -0.88
GTF3C1-204ENST00000564664 MYOZ3Q8TDC0 251 aa9.53□□□□□ -0.88
GTF3C1-204ENST00000564664 FAM46BQ96A09 425 aa9.53□□□□□ -0.88
GTF3C1-204ENST00000564664 RNF5Q99942 180 aa9.53□□□□□ -0.88
GTF3C1-204ENST00000564664 NABP2Q9BQ15 211 aa9.53□□□□□ -0.88
GTF3C1-204ENST00000564664 HSPB9Q9BQS6 159 aa9.53□□□□□ -0.88
GTF3C1-204ENST00000564664 SULT4A1Q9BR01 284 aa9.53□□□□□ -0.88
GTF3C1-204ENST00000564664 FAAP24Q9BTP7 215 aa9.53□□□□□ -0.88
GTF3C1-204ENST00000564664 OR51J1Q9H342 316 aa9.53□□□□□ -0.88
GTF3C1-204ENST00000564664 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.53□□□□□ -0.88
GTF3C1-204ENST00000564664 KIAA1456Q9P272 454 aa9.53□□□□□ -0.88
GTF3C1-204ENST00000564664 TMEM14DPA8MWL7 114 aa9.52□□□□□ -0.89
GTF3C1-204ENST00000564664 PTGES3LE9PB15 166 aa9.52□□□□□ -0.89
GTF3C1-204ENST00000564664 SLC22A1O15245 554 aa9.52□□□□□ -0.89
GTF3C1-204ENST00000564664 NBR2O15453 112 aa9.52□□□□□ -0.89
GTF3C1-204ENST00000564664 NAPSAO96009 420 aa9.52□□□□□ -0.89
GTF3C1-204ENST00000564664 IGLV1-40P01703 118 aa9.52□□□□□ -0.89
GTF3C1-204ENST00000564664 OR8U8P0C7N1 319 aa9.52□□□□□ -0.89
GTF3C1-204ENST00000564664 RAB25P57735 213 aa9.52□□□□□ -0.89
GTF3C1-204ENST00000564664 QRFPP83859 136 aa9.52□□□□□ -0.89
GTF3C1-204ENST00000564664 FHL3Q13643 280 aa9.52□□□□□ -0.89
GTF3C1-204ENST00000564664 C5orf64Q2M2E5 130 aa9.52□□□□□ -0.89
GTF3C1-204ENST00000564664 HSD17B12Q53GQ0 312 aa9.52□□□□□ -0.89
GTF3C1-204ENST00000564664 OR6M1Q8NGM8 313 aa9.52□□□□□ -0.89
GTF3C1-204ENST00000564664 URM1Q9BTM9 101 aaKnown RBP9.52□□□□□ -0.89
GTF3C1-204ENST00000564664 TMED9Q9BVK6 235 aa9.52□□□□□ -0.89
GTF3C1-204ENST00000564664 ISYNA1Q9NPH2 558 aa9.52□□□□□ -0.89
GTF3C1-204ENST00000564664 PLEKHJ1Q9NW61 149 aa9.52□□□□□ -0.89
GTF3C1-204ENST00000564664 VSIG4Q9Y279 399 aa9.52□□□□□ -0.89
GTF3C1-204ENST00000564664 LSM2Q9Y333 95 aaKnown RBP9.52□□□□□ -0.89
GTF3C1-204ENST00000564664 TPRKBQ9Y3C4 175 aa9.52□□□□□ -0.89
GTF3C1-204ENST00000564664 OR5H14A6NHG9 310 aa9.51□□□□□ -0.89
GTF3C1-204ENST00000564664 RBBP9O75884 186 aa9.51□□□□□ -0.89
GTF3C1-204ENST00000564664 NDUFA3O95167 84 aa9.51□□□□□ -0.89
GTF3C1-204ENST00000564664 UCHL1P09936 223 aa9.51□□□□□ -0.89
GTF3C1-204ENST00000564664 PSMA1P25786 263 aaKnown RBP9.51□□□□□ -0.89
GTF3C1-204ENST00000564664 BLVRBP30043 206 aaPredicted RBP9.51□□□□□ -0.89
GTF3C1-204ENST00000564664 PSMD7P51665 324 aa9.51□□□□□ -0.89
GTF3C1-204ENST00000564664 KIAA0141Q14154 515 aaPredicted RBP9.51□□□□□ -0.89
GTF3C1-204ENST00000564664 GNMTQ14749 295 aa9.51□□□□□ -0.89
GTF3C1-204ENST00000564664 RBM48Q5RL73 367 aaKnown RBP9.51□□□□□ -0.89
GTF3C1-204ENST00000564664 ZNF660Q6AZW8 331 aaPredicted RBP9.51□□□□□ -0.89
GTF3C1-204ENST00000564664 C6orf201Q7Z4U5 140 aa9.51□□□□□ -0.89
GTF3C1-204ENST00000564664 FAM89BQ8N5H3 189 aa9.51□□□□□ -0.89
GTF3C1-204ENST00000564664 TCTEX1D1Q8N7M0 179 aa9.51□□□□□ -0.89
GTF3C1-204ENST00000564664 ZNF491Q8N8L2 437 aa9.51□□□□□ -0.89
GTF3C1-204ENST00000564664 MINDY2Q8NBR6 621 aa9.51□□□□□ -0.89
GTF3C1-204ENST00000564664 OR11H1Q8NG94 326 aa9.51□□□□□ -0.89
GTF3C1-204ENST00000564664 EDARADDQ8WWZ3 215 aa9.51□□□□□ -0.89
GTF3C1-204ENST00000564664 UFD1Q92890 307 aa9.51□□□□□ -0.89
GTF3C1-204ENST00000564664 DUX3Q96PT4 197 aa9.51□□□□□ -0.89
GTF3C1-204ENST00000564664 MRPL20Q9BYC9 149 aaKnown RBP9.51□□□□□ -0.89
GTF3C1-204ENST00000564664 ANKRD60Q9BZ19 345 aa9.51□□□□□ -0.89
GTF3C1-204ENST00000564664 CHMP1AQ9HD42 196 aaPredicted RBP9.51□□□□□ -0.89
GTF3C1-204ENST00000564664 SLC23A1Q9UHI7 598 aa9.51□□□□□ -0.89
GTF3C1-204ENST00000564664 HSF4Q9ULV5 492 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms