RNA–Protein interactions for RNA: ENST00000564399.1

VPS4A-203, Transcript of vacuolar protein sorting 4 homolog A, humanhuman

TSL 5

Gene VPS4A, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4A-203ENST00000564399 FDX2Q6P4F2 183 aa5.54□□□□□ -1.52
VPS4A-203ENST00000564399 FAM131AQ6UXB0 335 aa5.54□□□□□ -1.52
VPS4A-203ENST00000564399 ZNF497Q6ZNH5 498 aa5.54□□□□□ -1.52
VPS4A-203ENST00000564399 OR5T1Q8NG75 326 aa5.54□□□□□ -1.52
VPS4A-203ENST00000564399 TSEN15Q8WW01 171 aaKnown RBP5.54□□□□□ -1.52
VPS4A-203ENST00000564399 ASB9Q96DX5 294 aa5.54□□□□□ -1.52
VPS4A-203ENST00000564399 MRPS24Q96EL2 167 aaKnown RBP5.54□□□□□ -1.52
VPS4A-203ENST00000564399 S100A13Q99584 98 aa5.54□□□□□ -1.52
VPS4A-203ENST00000564399 ABHD14AQ9BUJ0 271 aa5.54□□□□□ -1.52
VPS4A-203ENST00000564399 METTL9Q9H1A3 318 aa5.54□□□□□ -1.52
VPS4A-203ENST00000564399 IFT22Q9H7X7 185 aa5.54□□□□□ -1.52
VPS4A-203ENST00000564399 SLC23A1Q9UHI7 598 aa5.54□□□□□ -1.52
VPS4A-203ENST00000564399 ADAM30Q9UKF2 790 aa5.54□□□□□ -1.52
VPS4A-203ENST00000564399 A0A0J9YWU9 116 aa5.53□□□□□ -1.52
VPS4A-203ENST00000564399 AQP12BA6NM10 295 aa5.53□□□□□ -1.52
VPS4A-203ENST00000564399 MCRIP1C9JLW8 97 aa5.53□□□□□ -1.52
VPS4A-203ENST00000564399 H7C2Y5 167 aa5.53□□□□□ -1.52
VPS4A-203ENST00000564399 SLC16A6O15403 523 aa5.53□□□□□ -1.52
VPS4A-203ENST00000564399 SNX3O60493 162 aa5.53□□□□□ -1.52
VPS4A-203ENST00000564399 FKBP6O75344 327 aa5.53□□□□□ -1.52
VPS4A-203ENST00000564399 SNRPBP14678 240 aaKnown RBP5.53□□□□□ -1.52
VPS4A-203ENST00000564399 HOXB6P17509 224 aaKnown RBP5.53□□□□□ -1.52
VPS4A-203ENST00000564399 RCC1P18754 421 aaPredicted RBP5.53□□□□□ -1.52
VPS4A-203ENST00000564399 PPP1CCP36873 323 aaKnown RBP5.53□□□□□ -1.52
VPS4A-203ENST00000564399 ADARB1P78563 741 aaKnown RBP5.53□□□□□ -1.52
VPS4A-203ENST00000564399 TMED1Q13445 227 aa5.53□□□□□ -1.52
VPS4A-203ENST00000564399 DYRK1AQ13627 763 aa5.53□□□□□ -1.52
VPS4A-203ENST00000564399 GNMTQ14749 295 aa5.53□□□□□ -1.52
VPS4A-203ENST00000564399 MPV17LQ2QL34 196 aa5.53□□□□□ -1.52
VPS4A-203ENST00000564399 CD300EQ496F6 205 aaPredicted RBP5.53□□□□□ -1.52
VPS4A-203ENST00000564399 HSP90B2PQ58FF3 399 aa5.53□□□□□ -1.52
VPS4A-203ENST00000564399 NHLRC3Q5JS37 347 aa5.53□□□□□ -1.52
VPS4A-203ENST00000564399 TRAT1Q6PIZ9 186 aa5.53□□□□□ -1.52
VPS4A-203ENST00000564399 ASCL4Q6XD76 172 aa5.53□□□□□ -1.52
VPS4A-203ENST00000564399 LINC00596Q86U02 117 aa5.53□□□□□ -1.52
VPS4A-203ENST00000564399 SPATA24Q86W54 205 aa5.53□□□□□ -1.52
VPS4A-203ENST00000564399 LAX1Q8IWV1 398 aa5.53□□□□□ -1.52
VPS4A-203ENST00000564399 AQP12AQ8IXF9 295 aa5.53□□□□□ -1.52
VPS4A-203ENST00000564399 PARP16Q8N5Y8 322 aa5.53□□□□□ -1.52
VPS4A-203ENST00000564399 POC5Q8NA72 575 aa5.53□□□□□ -1.52
VPS4A-203ENST00000564399 OR52L2PQ8NGH6 319 aa5.53□□□□□ -1.52
VPS4A-203ENST00000564399 OR51A2Q8NGJ7 313 aa5.53□□□□□ -1.52
VPS4A-203ENST00000564399 OR2K2Q8NGT1 345 aa5.53□□□□□ -1.52
VPS4A-203ENST00000564399 GRPEL2Q8TAA5 225 aa5.53□□□□□ -1.52
VPS4A-203ENST00000564399 DYNLRB2Q8TF09 96 aa5.53□□□□□ -1.52
VPS4A-203ENST00000564399 RFKQ969G6 155 aa5.53□□□□□ -1.52
VPS4A-203ENST00000564399 NRBF2Q96F24 287 aa5.53□□□□□ -1.52
VPS4A-203ENST00000564399 OVOL2Q9BRP0 275 aa5.53□□□□□ -1.52
VPS4A-203ENST00000564399 TAF9BQ9HBM6 251 aa5.53□□□□□ -1.52
VPS4A-203ENST00000564399 KCNIP1Q9NZI2 227 aa5.53□□□□□ -1.52
VPS4A-203ENST00000564399 PEMTQ9UBM1 199 aa5.53□□□□□ -1.52
VPS4A-203ENST00000564399 PEF1Q9UBV8 284 aaKnown RBP5.53□□□□□ -1.52
VPS4A-203ENST00000564399 ENOPH1Q9UHY7 261 aa5.53□□□□□ -1.52
VPS4A-203ENST00000564399 SAA2-SAA4A0A096LPE2 208 aa5.52□□□□□ -1.53
VPS4A-203ENST00000564399 ZNF785A8K8V0 405 aa5.52□□□□□ -1.53
VPS4A-203ENST00000564399 DCTN3O75935 186 aa5.52□□□□□ -1.53
VPS4A-203ENST00000564399 OR2A4O95047 310 aa5.52□□□□□ -1.53
VPS4A-203ENST00000564399 NDUFB8O95169 186 aa5.52□□□□□ -1.53
VPS4A-203ENST00000564399 FADS2O95864 444 aaKnown RBP5.52□□□□□ -1.53
VPS4A-203ENST00000564399 CA2P00918 260 aa5.52□□□□□ -1.53
VPS4A-203ENST00000564399 RPSAP08865 295 aaKnown RBP5.52□□□□□ -1.53
VPS4A-203ENST00000564399 SAA2P0DJI9 122 aaPredicted RBP5.52□□□□□ -1.53
VPS4A-203ENST00000564399 SOX2P48431 317 aa5.52□□□□□ -1.53
VPS4A-203ENST00000564399 DEFA5Q01523 94 aa5.52□□□□□ -1.53
VPS4A-203ENST00000564399 FXYD3Q14802 87 aa5.52□□□□□ -1.53
VPS4A-203ENST00000564399 SLC22A6Q4U2R8 563 aa5.52□□□□□ -1.53
VPS4A-203ENST00000564399 C6orf141Q5SZD1 244 aa5.52□□□□□ -1.53
VPS4A-203ENST00000564399 LGALS9CQ6DKI2 356 aa5.52□□□□□ -1.53
VPS4A-203ENST00000564399 ZNF562Q6V9R5 426 aa5.52□□□□□ -1.53
VPS4A-203ENST00000564399 GLDNQ6ZMI3 551 aaPredicted RBP5.52□□□□□ -1.53
VPS4A-203ENST00000564399 ZNF833PQ6ZTB9 187 aa5.52□□□□□ -1.53
VPS4A-203ENST00000564399 ODF3L1Q8IXM7 274 aa5.52□□□□□ -1.53
VPS4A-203ENST00000564399 OR2AK2Q8NG84 335 aa5.52□□□□□ -1.53
VPS4A-203ENST00000564399 OR8J1Q8NGP2 316 aa5.52□□□□□ -1.53
VPS4A-203ENST00000564399 OR5AK2Q8NH90 309 aa5.52□□□□□ -1.53
VPS4A-203ENST00000564399 PELI1Q96FA3 418 aa5.52□□□□□ -1.53
VPS4A-203ENST00000564399 NSL1Q96IY1 281 aa5.52□□□□□ -1.53
VPS4A-203ENST00000564399 C4orf36Q96KX1 117 aa5.52□□□□□ -1.53
VPS4A-203ENST00000564399 RIBC2Q9H4K1 309 aa5.52□□□□□ -1.53
VPS4A-203ENST00000564399 SPACA1Q9HBV2 294 aa5.52□□□□□ -1.53
VPS4A-203ENST00000564399 PAK1IP1Q9NWT1 392 aaPredicted RBP5.52□□□□□ -1.53
VPS4A-203ENST00000564399 IL36GQ9NZH8 169 aa5.52□□□□□ -1.53
VPS4A-203ENST00000564399 METTL1Q9UBP6 276 aaKnown RBP5.52□□□□□ -1.53
VPS4A-203ENST00000564399 KMT2AQ03164 3969 aa5.51□□□□□ -1.53
VPS4A-203ENST00000564399 A0A0B4J203 849 aa5.51□□□□□ -1.53
VPS4A-203ENST00000564399 A0A1W2PP11 408 aa5.51□□□□□ -1.53
VPS4A-203ENST00000564399 OR5H14A6NHG9 310 aa5.51□□□□□ -1.53
VPS4A-203ENST00000564399 TMEM212A6NML5 194 aa5.51□□□□□ -1.53
VPS4A-203ENST00000564399 H3BUA1 57 aa5.51□□□□□ -1.53
VPS4A-203ENST00000564399 SLC22A1O15245 554 aa5.51□□□□□ -1.53
VPS4A-203ENST00000564399 AIREO43918 545 aa5.51□□□□□ -1.53
VPS4A-203ENST00000564399 ZNF780AO75290 641 aaPredicted RBP5.51□□□□□ -1.53
VPS4A-203ENST00000564399 RBBP9O75884 186 aa5.51□□□□□ -1.53
VPS4A-203ENST00000564399 TRBV12-3P01733 135 aa5.51□□□□□ -1.53
VPS4A-203ENST00000564399 MAS1P04201 325 aa5.51□□□□□ -1.53
VPS4A-203ENST00000564399 GTF2F2P13984 249 aa5.51□□□□□ -1.53
VPS4A-203ENST00000564399 AADACP22760 399 aa5.51□□□□□ -1.53
VPS4A-203ENST00000564399 MC5RP33032 325 aa5.51□□□□□ -1.53
VPS4A-203ENST00000564399 ZNF93P35789 620 aaPredicted RBP5.51□□□□□ -1.53
VPS4A-203ENST00000564399 MECP2P51608 486 aaKnown RBP5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 144.4 ms