RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 L7N2F9 121 aa14.95□□□□□ -0.02
COMMD4-208ENST00000563220 PHF1O43189 567 aaPredicted RBP14.95□□□□□ -0.02
COMMD4-208ENST00000563220 LY6HO94772 140 aa14.95□□□□□ -0.02
COMMD4-208ENST00000563220 HOXB5P09067 269 aa14.95□□□□□ -0.02
COMMD4-208ENST00000563220 LTC4SQ16873 150 aa14.95□□□□□ -0.02
COMMD4-208ENST00000563220 C17orf58Q2M2W7 97 aa14.95□□□□□ -0.02
COMMD4-208ENST00000563220 SUCNR1Q9BXA5 334 aa14.95□□□□□ -0.02
COMMD4-208ENST00000563220 GSX2Q9BZM3 304 aa14.95□□□□□ -0.02
COMMD4-208ENST00000563220 SLC25A10Q9UBX3 287 aaPredicted RBP14.95□□□□□ -0.02
COMMD4-208ENST00000563220 FBXO9Q9UK97 447 aaPredicted RBP14.95□□□□□ -0.02
COMMD4-208ENST00000563220 RBM7Q9Y580 266 aaKnown RBP14.95□□□□□ -0.02
COMMD4-208ENST00000563220 RAI1Q7Z5J4 1906 aaPredicted RBP14.95□□□□□ -0.02
COMMD4-208ENST00000563220 SHOXO15266 292 aa14.95□□□□□ -0.02
COMMD4-208ENST00000563220 ADAM20O43506 726 aa14.95□□□□□ -0.02
COMMD4-208ENST00000563220 RP2O75695 350 aa14.95□□□□□ -0.02
COMMD4-208ENST00000563220 CFDP00746 253 aaPredicted RBP14.95□□□□□ -0.02
COMMD4-208ENST00000563220 NDUFB7P17568 137 aa14.95□□□□□ -0.02
COMMD4-208ENST00000563220 RAB14P61106 215 aa14.95□□□□□ -0.02
COMMD4-208ENST00000563220 GSG1LQ6UXU4 331 aa14.95□□□□□ -0.02
COMMD4-208ENST00000563220 CMTM1Q8IZ96 169 aa14.95□□□□□ -0.02
COMMD4-208ENST00000563220 METTL8Q9H825 291 aaKnown RBP14.95□□□□□ -0.02
COMMD4-208ENST00000563220 CALYQ9NYX4 217 aa14.95□□□□□ -0.02
COMMD4-208ENST00000563220 CTSZQ9UBR2 303 aa14.95□□□□□ -0.02
COMMD4-208ENST00000563220 TRAV14DV4A0A0A6YYC5 116 aa14.94□□□□□ -0.02
COMMD4-208ENST00000563220 OMGP23515 440 aa14.94□□□□□ -0.02
COMMD4-208ENST00000563220 LIAT1Q6ZQX7 453 aa14.94□□□□□ -0.02
COMMD4-208ENST00000563220 CCDC28AQ8IWP9 274 aa14.94□□□□□ -0.02
COMMD4-208ENST00000563220 LHFPL5Q8TAF8 219 aa14.94□□□□□ -0.02
COMMD4-208ENST00000563220 NINJ1Q92982 152 aa14.94□□□□□ -0.02
COMMD4-208ENST00000563220 OR10C1Q96KK4 312 aa14.94□□□□□ -0.02
COMMD4-208ENST00000563220 UBTD1Q9HAC8 227 aa14.94□□□□□ -0.02
COMMD4-208ENST00000563220 RNF150Q9ULK6 438 aa14.94□□□□□ -0.02
COMMD4-208ENST00000563220 F2RL2O00254 374 aa14.93□□□□□ -0.02
COMMD4-208ENST00000563220 LOXL3P58215 753 aa14.93□□□□□ -0.02
COMMD4-208ENST00000563220 LRTM2Q8N967 370 aa14.93□□□□□ -0.02
COMMD4-208ENST00000563220 CORO2AQ92828 525 aa14.93□□□□□ -0.02
COMMD4-208ENST00000563220 KAAG1Q9UBP8 84 aa14.93□□□□□ -0.02
COMMD4-208ENST00000563220 TRGV10A0A0A0MS01 117 aa14.93□□□□□ -0.02
COMMD4-208ENST00000563220 KBTBD11-OT1A0A1B0GTJ5 212 aa14.93□□□□□ -0.02
COMMD4-208ENST00000563220 RRASP10301 218 aa14.93□□□□□ -0.02
COMMD4-208ENST00000563220 S100A11P31949 105 aa14.93□□□□□ -0.02
COMMD4-208ENST00000563220 AKR1E2Q96JD6 320 aa14.93□□□□□ -0.02
COMMD4-208ENST00000563220 C18orf12Q96KH6 178 aa14.93□□□□□ -0.02
COMMD4-208ENST00000563220 TMEM222Q9H0R3 208 aa14.93□□□□□ -0.02
COMMD4-208ENST00000563220 CLN8Q9UBY8 286 aa14.93□□□□□ -0.02
COMMD4-208ENST00000563220 KCNS2Q9ULS6 477 aa14.93□□□□□ -0.02
COMMD4-208ENST00000563220 TANC2Q9HCD6 1990 aa14.93□□□□□ -0.02
COMMD4-208ENST00000563220 NDUFA2O43678 99 aa14.92□□□□□ -0.02
COMMD4-208ENST00000563220 MORN2Q502X0 79 aa14.92□□□□□ -0.02
COMMD4-208ENST00000563220 TOR2AQ5JU69 321 aa14.92□□□□□ -0.02
COMMD4-208ENST00000563220 UTF1Q5T230 341 aa14.92□□□□□ -0.02
COMMD4-208ENST00000563220 GGNBP1Q5YKI7 109 aa14.92□□□□□ -0.02
COMMD4-208ENST00000563220 LYZL2Q7Z4W2 148 aa14.92□□□□□ -0.02
COMMD4-208ENST00000563220 LGI3Q8N145 548 aa14.92□□□□□ -0.02
COMMD4-208ENST00000563220 DRAM1Q8N682 238 aa14.92□□□□□ -0.02
COMMD4-208ENST00000563220 PPP1R1CQ8WVI7 109 aa14.92□□□□□ -0.02
COMMD4-208ENST00000563220 NEU4Q8WWR8 484 aaPredicted RBP14.92□□□□□ -0.02
COMMD4-208ENST00000563220 C5orf30Q96GV9 206 aa14.92□□□□□ -0.02
COMMD4-208ENST00000563220 C19orf12Q9NSK7 152 aa14.92□□□□□ -0.02
COMMD4-208ENST00000563220 FLNCQ14315 2725 aa14.92□□□□□ -0.02
COMMD4-208ENST00000563220 DVL1O14640 695 aa14.91□□□□□ -0.02
COMMD4-208ENST00000563220 NDUFB3O43676 98 aa14.91□□□□□ -0.02
COMMD4-208ENST00000563220 B3GALNT1O75752 331 aa14.91□□□□□ -0.02
COMMD4-208ENST00000563220 IGHV2-70P01814 119 aa14.91□□□□□ -0.02
COMMD4-208ENST00000563220 F2RP25116 425 aa14.91□□□□□ -0.02
COMMD4-208ENST00000563220 SRSF1Q07955 248 aaKnown RBP eCLIP14.91□□□□□ -0.02
COMMD4-208ENST00000563220 LRRC37A5PQ49AS3 106 aa14.91□□□□□ -0.02
COMMD4-208ENST00000563220 AGMATQ9BSE5 352 aa14.91□□□□□ -0.02
COMMD4-208ENST00000563220 NMES1Q9C002 83 aa14.91□□□□□ -0.02
COMMD4-208ENST00000563220 OR2D2Q9H210 308 aa14.91□□□□□ -0.02
COMMD4-208ENST00000563220 MED9Q9NWA0 146 aa14.91□□□□□ -0.02
COMMD4-208ENST00000563220 GNG12Q9UBI6 72 aa14.91□□□□□ -0.02
COMMD4-208ENST00000563220 JPT1Q9UK76 154 aa14.91□□□□□ -0.02
COMMD4-208ENST00000563220 UBE2J1Q9Y385 318 aaPredicted RBP14.91□□□□□ -0.02
COMMD4-208ENST00000563220 USP9XQ93008 2570 aaPredicted RBP14.91□□□□□ -0.02
COMMD4-208ENST00000563220 DOPEY1Q5JWR5 2465 aa14.91□□□□□ -0.02
COMMD4-208ENST00000563220 YPEL1O60688 119 aa14.91□□□□□ -0.02
COMMD4-208ENST00000563220 FSTL3O95633 263 aa14.91□□□□□ -0.02
COMMD4-208ENST00000563220 CDKN1AP38936 164 aa14.91□□□□□ -0.02
COMMD4-208ENST00000563220 ZNF273Q14593 569 aa14.91□□□□□ -0.02
COMMD4-208ENST00000563220 LRRC10Q5BKY1 277 aa14.91□□□□□ -0.02
COMMD4-208ENST00000563220 TMUB2Q71RG4 321 aa14.91□□□□□ -0.02
COMMD4-208ENST00000563220 COMMD7Q86VX2 200 aa14.91□□□□□ -0.02
COMMD4-208ENST00000563220 ZNF645Q8N7E2 425 aa14.91□□□□□ -0.02
COMMD4-208ENST00000563220 OR51H1Q8NH63 302 aa14.91□□□□□ -0.02
COMMD4-208ENST00000563220 C2orf50Q96LR7 162 aa14.91□□□□□ -0.02
COMMD4-208ENST00000563220 TMEM56Q96MV1 263 aa14.91□□□□□ -0.02
COMMD4-208ENST00000563220 YPEL2Q96QA6 119 aa14.91□□□□□ -0.02
COMMD4-208ENST00000563220 LINC00574Q9H8X3 128 aa14.91□□□□□ -0.02
COMMD4-208ENST00000563220 TMEM56-RWDD3S4R434 201 aa14.91□□□□□ -0.02
COMMD4-208ENST00000563220 SPTAN1Q13813 2472 aaKnown RBP14.9□□□□□ -0.02
COMMD4-208ENST00000563220 hADV38S2A0JD32 116 aa14.9□□□□□ -0.02
COMMD4-208ENST00000563220 H0Y980 276 aa14.9□□□□□ -0.02
COMMD4-208ENST00000563220 ST8SIA5O15466 376 aa14.9□□□□□ -0.02
COMMD4-208ENST00000563220 MMP23AO75900 390 aa14.9□□□□□ -0.02
COMMD4-208ENST00000563220 IGHV3-7P01780 117 aa14.9□□□□□ -0.02
COMMD4-208ENST00000563220 DAOP14920 347 aa14.9□□□□□ -0.02
COMMD4-208ENST00000563220 RPA2P15927 270 aa14.9□□□□□ -0.02
COMMD4-208ENST00000563220 UCP1P25874 307 aa14.9□□□□□ -0.02
COMMD4-208ENST00000563220 S100GP29377 79 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms