RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 LEUTXA8MZ59 168 aa15.28■□□□□ 0.04
RAB40C-207ENST00000563109 NAT1P18440 290 aa15.28■□□□□ 0.04
RAB40C-207ENST00000563109 ETV6P41212 452 aa15.28■□□□□ 0.04
RAB40C-207ENST00000563109 OR3A3P47888 321 aa15.28■□□□□ 0.04
RAB40C-207ENST00000563109 RAB7AP51149 207 aa15.28■□□□□ 0.04
RAB40C-207ENST00000563109 DGCR2P98153 550 aa15.28■□□□□ 0.04
RAB40C-207ENST00000563109 SSBP1Q04837 148 aaKnown RBP15.28■□□□□ 0.04
RAB40C-207ENST00000563109 RBMS3Q6XE24 437 aaKnown RBP15.28■□□□□ 0.04
RAB40C-207ENST00000563109 SLC25A48Q6ZT89 311 aaKnown RBP15.28■□□□□ 0.04
RAB40C-207ENST00000563109 LURAP1LQ8IV03 231 aa15.28■□□□□ 0.04
RAB40C-207ENST00000563109 BCL6BQ8N143 479 aaPredicted RBP15.28■□□□□ 0.04
RAB40C-207ENST00000563109 ZNF439Q8NDP4 499 aa15.28■□□□□ 0.04
RAB40C-207ENST00000563109 OR5AP2Q8NGF4 316 aa15.28■□□□□ 0.04
RAB40C-207ENST00000563109 OR5H2Q8NGV7 314 aa15.28■□□□□ 0.04
RAB40C-207ENST00000563109 ZDHHC16Q969W1 377 aa15.28■□□□□ 0.04
RAB40C-207ENST00000563109 SOSTQ9BQB4 213 aa15.28■□□□□ 0.04
RAB40C-207ENST00000563109 OCEL1Q9H607 264 aa15.28■□□□□ 0.04
RAB40C-207ENST00000563109 RDH8Q9NYR8 311 aa15.28■□□□□ 0.04
RAB40C-207ENST00000563109 DPM3Q9P2X0 92 aa15.28■□□□□ 0.04
RAB40C-207ENST00000563109 V9GYH0 126 aa15.28■□□□□ 0.04
RAB40C-207ENST00000563109 NSD1Q96L73 2696 aaPredicted RBP15.28■□□□□ 0.04
RAB40C-207ENST00000563109 BUB1B-PAK6H3BSN5 160 aa15.27■□□□□ 0.04
RAB40C-207ENST00000563109 CDK10Q15131 360 aa15.27■□□□□ 0.04
RAB40C-207ENST00000563109 ACTBL2Q562R1 376 aa15.27■□□□□ 0.04
RAB40C-207ENST00000563109 LINC00299Q6ZSB3 139 aa15.27■□□□□ 0.04
RAB40C-207ENST00000563109 LHFPL4Q7Z7J7 247 aa15.27■□□□□ 0.04
RAB40C-207ENST00000563109 ZNF418Q8TF45 676 aaPredicted RBP15.27■□□□□ 0.04
RAB40C-207ENST00000563109 MALSU1Q96EH3 234 aa15.27■□□□□ 0.04
RAB40C-207ENST00000563109 ZNRD1Q9P1U0 126 aa15.27■□□□□ 0.04
RAB40C-207ENST00000563109 MTFP1Q9UDX5 166 aa15.27■□□□□ 0.04
RAB40C-207ENST00000563109 ANK3Q12955 4377 aaKnown RBP15.26■□□□□ 0.03
RAB40C-207ENST00000563109 ITGB1BP1O14713 200 aa15.26■□□□□ 0.03
RAB40C-207ENST00000563109 SLC31A2O15432 143 aa15.26■□□□□ 0.03
RAB40C-207ENST00000563109 GSTZ1O43708 216 aaPredicted RBP15.26■□□□□ 0.03
RAB40C-207ENST00000563109 HLA-DMAP28067 261 aa15.26■□□□□ 0.03
RAB40C-207ENST00000563109 ARHGDIBP52566 201 aa15.26■□□□□ 0.03
RAB40C-207ENST00000563109 DEFB112Q30KQ8 113 aa15.26■□□□□ 0.03
RAB40C-207ENST00000563109 CT45A1Q5HYN5 189 aa15.26■□□□□ 0.03
RAB40C-207ENST00000563109 LYG1Q8N1E2 194 aa15.26■□□□□ 0.03
RAB40C-207ENST00000563109 CT45A3Q8NHU0 189 aa15.26■□□□□ 0.03
RAB40C-207ENST00000563109 TOMM40LQ969M1 308 aa15.26■□□□□ 0.03
RAB40C-207ENST00000563109 RPEQ96AT9 228 aa15.26■□□□□ 0.03
RAB40C-207ENST00000563109 EHFQ9NZC4 300 aa15.26■□□□□ 0.03
RAB40C-207ENST00000563109 KLK11Q9UBX7 282 aa15.26■□□□□ 0.03
RAB40C-207ENST00000563109 RBM7Q9Y580 266 aaKnown RBP15.26■□□□□ 0.03
RAB40C-207ENST00000563109 SOX21Q9Y651 276 aaPredicted RBP15.26■□□□□ 0.03
RAB40C-207ENST00000563109 MDFIC2A0A1B0GVS7 189 aa15.25■□□□□ 0.03
RAB40C-207ENST00000563109 ZNF736B4DX44 427 aaPredicted RBP15.25■□□□□ 0.03
RAB40C-207ENST00000563109 ST8SIA5O15466 376 aa15.25■□□□□ 0.03
RAB40C-207ENST00000563109 CSF1P09603 554 aa15.25■□□□□ 0.03
RAB40C-207ENST00000563109 OR5H8P0DN80 308 aa15.25■□□□□ 0.03
RAB40C-207ENST00000563109 SSX2Q16385 188 aa15.25■□□□□ 0.03
RAB40C-207ENST00000563109 TPTE2P1Q5T6R2 138 aa15.25■□□□□ 0.03
RAB40C-207ENST00000563109 CCDC144NLQ6NUI1 221 aa15.25■□□□□ 0.03
RAB40C-207ENST00000563109 H1FOOQ8IZA3 346 aaPredicted RBP15.25■□□□□ 0.03
RAB40C-207ENST00000563109 SIGLECL1Q8N7X8 197 aa15.25■□□□□ 0.03
RAB40C-207ENST00000563109 FAM216AQ8WUB2 273 aa15.25■□□□□ 0.03
RAB40C-207ENST00000563109 TOLLIPQ9H0E2 274 aa15.25■□□□□ 0.03
RAB40C-207ENST00000563109 TAS2R8Q9NYW2 309 aa15.25■□□□□ 0.03
RAB40C-207ENST00000563109 ZNF107Q9UII5 783 aaPredicted RBP15.25■□□□□ 0.03
RAB40C-207ENST00000563109 HILPDAQ9Y5L2 63 aa15.25■□□□□ 0.03
RAB40C-207ENST00000563109 NAV3Q8IVL0 2385 aa15.25■□□□□ 0.03
RAB40C-207ENST00000563109 FN1P02751 2386 aaKnown RBP15.24■□□□□ 0.03
RAB40C-207ENST00000563109 OOSP1A8MZH6 123 aa15.24■□□□□ 0.03
RAB40C-207ENST00000563109 PMP2P02689 132 aa15.24■□□□□ 0.03
RAB40C-207ENST00000563109 TBPP20226 339 aa15.24■□□□□ 0.03
RAB40C-207ENST00000563109 HRH1P35367 487 aa15.24■□□□□ 0.03
RAB40C-207ENST00000563109 ZNF134P52741 427 aa15.24■□□□□ 0.03
RAB40C-207ENST00000563109 TAS2R19P59542 299 aa15.24■□□□□ 0.03
RAB40C-207ENST00000563109 ZNF45Q02386 682 aa15.24■□□□□ 0.03
RAB40C-207ENST00000563109 ZNF79Q15937 498 aa15.24■□□□□ 0.03
RAB40C-207ENST00000563109 Q8N402 240 aa15.24■□□□□ 0.03
RAB40C-207ENST00000563109 C17orf50Q8WW18 174 aa15.24■□□□□ 0.03
RAB40C-207ENST00000563109 PARP12Q9H0J9 701 aaKnown RBP15.24■□□□□ 0.03
RAB40C-207ENST00000563109 C11orf54Q9H0W9 315 aaPredicted RBP15.24■□□□□ 0.03
RAB40C-207ENST00000563109 IFI27L2Q9H2X8 130 aa15.24■□□□□ 0.03
RAB40C-207ENST00000563109 GHITMQ9H3K2 345 aa15.24■□□□□ 0.03
RAB40C-207ENST00000563109 PIPOXQ9P0Z9 390 aa15.24■□□□□ 0.03
RAB40C-207ENST00000563109 HSD17B6O14756 317 aa15.23■□□□□ 0.03
RAB40C-207ENST00000563109 IFNA2P01563 188 aa15.23■□□□□ 0.03
RAB40C-207ENST00000563109 NFYAP23511 347 aaPredicted RBP15.23■□□□□ 0.03
RAB40C-207ENST00000563109 RNASE10Q5GAN6 216 aaKnown RBP15.23■□□□□ 0.03
RAB40C-207ENST00000563109 LDLRAD3Q86YD5 345 aa15.23■□□□□ 0.03
RAB40C-207ENST00000563109 TMEM229BQ8NBD8 167 aa15.23■□□□□ 0.03
RAB40C-207ENST00000563109 S100ZQ8WXG8 99 aa15.23■□□□□ 0.03
RAB40C-207ENST00000563109 ZNF48Q96MX3 618 aaPredicted RBP15.23■□□□□ 0.03
RAB40C-207ENST00000563109 ABCB10Q9NRK6 738 aa15.23■□□□□ 0.03
RAB40C-207ENST00000563109 ZNF221Q9UK13 617 aa15.23■□□□□ 0.03
RAB40C-207ENST00000563109 RBMX2Q9Y388 322 aaKnown RBP15.23■□□□□ 0.03
RAB40C-207ENST00000563109 BTBD17A6NE02 478 aa15.22■□□□□ 0.03
RAB40C-207ENST00000563109 LY6LH3BQJ8 138 aa15.22■□□□□ 0.03
RAB40C-207ENST00000563109 RAB29O14966 203 aa15.22■□□□□ 0.03
RAB40C-207ENST00000563109 TXNL1O43396 289 aa15.22■□□□□ 0.03
RAB40C-207ENST00000563109 GAPDHP04406 335 aaKnown RBP15.22■□□□□ 0.03
RAB40C-207ENST00000563109 FCGR2CP31995 323 aa15.22■□□□□ 0.03
RAB40C-207ENST00000563109 GPR12P47775 334 aa15.22■□□□□ 0.03
RAB40C-207ENST00000563109 LUMP51884 338 aaPredicted RBP15.22■□□□□ 0.03
RAB40C-207ENST00000563109 ZNF137PP52743 207 aa15.22■□□□□ 0.03
RAB40C-207ENST00000563109 HERV-K104P61576 105 aa15.22■□□□□ 0.03
RAB40C-207ENST00000563109 DYRK1AQ13627 763 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms