RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 ZNF160Q9HCG1 818 aa12.02□□□□□ -0.49
GTF3C1-203ENST00000562609 PTRH2Q9Y3E5 179 aaKnown RBP12.02□□□□□ -0.49
GTF3C1-203ENST00000562609 PXMP4Q9Y6I8 212 aa12.02□□□□□ -0.49
GTF3C1-203ENST00000562609 HSBP1L1C9JCN9 74 aa12.01□□□□□ -0.49
GTF3C1-203ENST00000562609 ZFAND5O76080 213 aa12.01□□□□□ -0.49
GTF3C1-203ENST00000562609 ANOS1P23352 680 aa12.01□□□□□ -0.49
GTF3C1-203ENST00000562609 HNRNPA3P51991 378 aaKnown RBP12.01□□□□□ -0.49
GTF3C1-203ENST00000562609 MLF1P58340 268 aa12.01□□□□□ -0.49
GTF3C1-203ENST00000562609 UBE2G2P60604 165 aa12.01□□□□□ -0.49
GTF3C1-203ENST00000562609 PAFAH1B2P68402 229 aa12.01□□□□□ -0.49
GTF3C1-203ENST00000562609 MEF2BQ02080 365 aaPredicted RBP12.01□□□□□ -0.49
GTF3C1-203ENST00000562609 KISS1Q15726 138 aa12.01□□□□□ -0.49
GTF3C1-203ENST00000562609 MRPL14Q6P1L8 145 aaKnown RBP12.01□□□□□ -0.49
GTF3C1-203ENST00000562609 PARLQ9H300 379 aa12.01□□□□□ -0.49
GTF3C1-203ENST00000562609 H3BP45 60 aa12.01□□□□□ -0.49
GTF3C1-203ENST00000562609 ZNF17P17021 662 aa12.01□□□□□ -0.49
GTF3C1-203ENST00000562609 COMPP49747 757 aaPredicted RBP12.01□□□□□ -0.49
GTF3C1-203ENST00000562609 TLE3Q04726 772 aa12.01□□□□□ -0.49
GTF3C1-203ENST00000562609 TESK1Q15569 626 aa12.01□□□□□ -0.49
GTF3C1-203ENST00000562609 OR4B1Q8NGF8 309 aa12.01□□□□□ -0.49
GTF3C1-203ENST00000562609 WDYHV1Q96HA8 205 aa12.01□□□□□ -0.49
GTF3C1-203ENST00000562609 ZNF286AQ9HBT8 521 aa12.01□□□□□ -0.49
GTF3C1-203ENST00000562609 IGHV2-70DA0A0C4DH43 119 aa12.01□□□□□ -0.49
GTF3C1-203ENST00000562609 ADAM20O43506 726 aa12.01□□□□□ -0.49
GTF3C1-203ENST00000562609 CHST1O43916 411 aa12.01□□□□□ -0.49
GTF3C1-203ENST00000562609 HINT1P49773 126 aaPredicted RBP12.01□□□□□ -0.49
GTF3C1-203ENST00000562609 LCN2P80188 198 aa12.01□□□□□ -0.49
GTF3C1-203ENST00000562609 SPATA45Q537H7 98 aa12.01□□□□□ -0.49
GTF3C1-203ENST00000562609 TCF23Q7RTU1 214 aa12.01□□□□□ -0.49
GTF3C1-203ENST00000562609 CORO2AQ92828 525 aa12.01□□□□□ -0.49
GTF3C1-203ENST00000562609 NUDT11Q96G61 164 aa12.01□□□□□ -0.49
GTF3C1-203ENST00000562609 UQCR10Q9UDW1 63 aa12.01□□□□□ -0.49
GTF3C1-203ENST00000562609 EP300Q09472 2414 aaPredicted RBP12□□□□□ -0.49
GTF3C1-203ENST00000562609 FRYQ5TBA9 3013 aa12□□□□□ -0.49
GTF3C1-203ENST00000562609 SYNGR4O95473 234 aa12□□□□□ -0.49
GTF3C1-203ENST00000562609 GYPAP02724 150 aa12□□□□□ -0.49
GTF3C1-203ENST00000562609 AADACP22760 399 aa12□□□□□ -0.49
GTF3C1-203ENST00000562609 ADMP35318 185 aa12□□□□□ -0.49
GTF3C1-203ENST00000562609 PTGDSP41222 190 aa12□□□□□ -0.49
GTF3C1-203ENST00000562609 LDLRAD2Q5SZI1 272 aa12□□□□□ -0.49
GTF3C1-203ENST00000562609 OR5AU1Q8NGC0 362 aa12□□□□□ -0.49
GTF3C1-203ENST00000562609 CACNA1HO95180 2353 aa12□□□□□ -0.49
GTF3C1-203ENST00000562609 DUXBA0A1W2PPF3 345 aa12□□□□□ -0.49
GTF3C1-203ENST00000562609 F6UZH7 168 aa12□□□□□ -0.49
GTF3C1-203ENST00000562609 RPS18P62269 152 aaKnown RBP12□□□□□ -0.49
GTF3C1-203ENST00000562609 RPL19P84098 196 aaKnown RBP12□□□□□ -0.49
GTF3C1-203ENST00000562609 DNM1P34Q6PK57 102 aa12□□□□□ -0.49
GTF3C1-203ENST00000562609 MYPOPQ86VE0 399 aaPredicted RBP12□□□□□ -0.49
GTF3C1-203ENST00000562609 ZNF695Q8IW36 515 aa12□□□□□ -0.49
GTF3C1-203ENST00000562609 UEVLDQ8IX04 471 aa12□□□□□ -0.49
GTF3C1-203ENST00000562609 MCEMP1Q8IX19 187 aa12□□□□□ -0.49
GTF3C1-203ENST00000562609 OR8B12Q8NGG6 310 aa12□□□□□ -0.49
GTF3C1-203ENST00000562609 OR2D3Q8NGH3 330 aa12□□□□□ -0.49
GTF3C1-203ENST00000562609 KCNE4Q8WWG9 221 aa12□□□□□ -0.49
GTF3C1-203ENST00000562609 C11orf40Q8WZ69 217 aa12□□□□□ -0.49
GTF3C1-203ENST00000562609 RYDENQ9NUL5 291 aaKnown RBP12□□□□□ -0.49
GTF3C1-203ENST00000562609 TP53TG3Q9ULZ0 132 aa12□□□□□ -0.49
GTF3C1-203ENST00000562609 SHANK1Q9Y566 2161 aa12□□□□□ -0.49
GTF3C1-203ENST00000562609 IGHV2OR16-5A0A0B4J2B6 119 aa11.99□□□□□ -0.49
GTF3C1-203ENST00000562609 C3orf85A0A1B0GTC6 90 aa11.99□□□□□ -0.49
GTF3C1-203ENST00000562609 NPIPA5E9PKD4 350 aa11.99□□□□□ -0.49
GTF3C1-203ENST00000562609 SERF1AO75920 110 aa11.99□□□□□ -0.49
GTF3C1-203ENST00000562609 RAC2P15153 192 aa11.99□□□□□ -0.49
GTF3C1-203ENST00000562609 SUMO1P63165 101 aaKnown RBP11.99□□□□□ -0.49
GTF3C1-203ENST00000562609 MYBPHQ13203 477 aa11.99□□□□□ -0.49
GTF3C1-203ENST00000562609 TMPRSS7Q7RTY8 843 aa11.99□□□□□ -0.49
GTF3C1-203ENST00000562609 TMEM105Q8N8V8 129 aa11.99□□□□□ -0.49
GTF3C1-203ENST00000562609 MRPL30Q8TCC3 161 aaKnown RBP11.99□□□□□ -0.49
GTF3C1-203ENST00000562609 SCGB1C1Q8TD33 95 aa11.99□□□□□ -0.49
GTF3C1-203ENST00000562609 BTF3L4Q96K17 158 aa11.99□□□□□ -0.49
GTF3C1-203ENST00000562609 SPIN2AQ99865 258 aa11.99□□□□□ -0.49
GTF3C1-203ENST00000562609 SPIN2BQ9BPZ2 258 aa11.99□□□□□ -0.49
GTF3C1-203ENST00000562609 RBM24Q9BX46 236 aaKnown RBP11.99□□□□□ -0.49
GTF3C1-203ENST00000562609 NPIPA1Q9UND3 350 aa11.99□□□□□ -0.49
GTF3C1-203ENST00000562609 FAM186AA6NE01 2351 aa11.99□□□□□ -0.49
GTF3C1-203ENST00000562609 HYPMO75409 117 aa11.99□□□□□ -0.49
GTF3C1-203ENST00000562609 LINC00310P59036 64 aa11.99□□□□□ -0.49
GTF3C1-203ENST00000562609 KRTDAPP60985 99 aa11.99□□□□□ -0.49
GTF3C1-203ENST00000562609 MSMO1Q15800 293 aa11.99□□□□□ -0.49
GTF3C1-203ENST00000562609 CCDC71LQ8N9Z2 235 aa11.99□□□□□ -0.49
GTF3C1-203ENST00000562609 ST8SIA1Q92185 356 aa11.99□□□□□ -0.49
GTF3C1-203ENST00000562609 SAMD10Q9BYL1 202 aa11.99□□□□□ -0.49
GTF3C1-203ENST00000562609 HSPB7Q9UBY9 170 aa11.99□□□□□ -0.49
GTF3C1-203ENST00000562609 UBE2J1Q9Y385 318 aaPredicted RBP11.99□□□□□ -0.49
GTF3C1-203ENST00000562609 CFAP47Q6ZTR5 3102 aa11.99□□□□□ -0.49
GTF3C1-203ENST00000562609 CLEC18AA5D8T8 446 aa11.98□□□□□ -0.49
GTF3C1-203ENST00000562609 ZNF814B7Z6K7 855 aa11.98□□□□□ -0.49
GTF3C1-203ENST00000562609 KLF7O75840 302 aaPredicted RBP11.98□□□□□ -0.49
GTF3C1-203ENST00000562609 CTRLP40313 264 aa11.98□□□□□ -0.49
GTF3C1-203ENST00000562609 MDH2P40926 338 aaKnown RBP11.98□□□□□ -0.49
GTF3C1-203ENST00000562609 TMEM267Q0VDI3 215 aaPredicted RBP11.98□□□□□ -0.49
GTF3C1-203ENST00000562609 PCOLCEQ15113 449 aa11.98□□□□□ -0.49
GTF3C1-203ENST00000562609 C16orf54Q6UWD8 224 aa11.98□□□□□ -0.49
GTF3C1-203ENST00000562609 H1FNTQ75WM6 255 aaPredicted RBP11.98□□□□□ -0.49
GTF3C1-203ENST00000562609 CLEC18CQ8NCF0 446 aa11.98□□□□□ -0.49
GTF3C1-203ENST00000562609 SSC4DQ8WTU2 575 aa11.98□□□□□ -0.49
GTF3C1-203ENST00000562609 LHX4Q969G2 390 aa11.98□□□□□ -0.49
GTF3C1-203ENST00000562609 SPACA9Q96E40 222 aaPredicted RBP11.98□□□□□ -0.49
GTF3C1-203ENST00000562609 TM2D1Q9BX74 207 aa11.98□□□□□ -0.49
GTF3C1-203ENST00000562609 RBM7Q9Y580 266 aaKnown RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms