RNA–Protein interactions for RNA: ENST00000562601.5

CDH13-206, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-206ENST00000562601 FAM3DQ96BQ1 224 aa4.66□□□□□ -1.66
CDH13-206ENST00000562601 MALSU1Q96EH3 234 aa4.66□□□□□ -1.66
CDH13-206ENST00000562601 MRPS24Q96EL2 167 aaKnown RBP4.66□□□□□ -1.66
CDH13-206ENST00000562601 NEDD4LQ96PU5 975 aa4.66□□□□□ -1.66
CDH13-206ENST00000562601 CHCHD6Q9BRQ6 235 aa4.66□□□□□ -1.66
CDH13-206ENST00000562601 HDHD3Q9BSH5 251 aaPredicted RBP4.66□□□□□ -1.66
CDH13-206ENST00000562601 LPAR5Q9H1C0 372 aa4.66□□□□□ -1.66
CDH13-206ENST00000562601 NCOR1P1Q9H4R4 102 aa4.66□□□□□ -1.66
CDH13-206ENST00000562601 SPACA1Q9HBV2 294 aa4.66□□□□□ -1.66
CDH13-206ENST00000562601 CHMP1AQ9HD42 196 aaPredicted RBP4.66□□□□□ -1.66
CDH13-206ENST00000562601 ABCB10Q9NRK6 738 aa4.66□□□□□ -1.66
CDH13-206ENST00000562601 TXNL4BQ9NX01 149 aaKnown RBP4.66□□□□□ -1.66
CDH13-206ENST00000562601 GHRLQ9UBU3 117 aa4.66□□□□□ -1.66
CDH13-206ENST00000562601 STEAP1Q9UHE8 339 aa4.66□□□□□ -1.66
CDH13-206ENST00000562601 VPREB3Q9UKI3 123 aa4.66□□□□□ -1.66
CDH13-206ENST00000562601 STUB1Q9UNE7 303 aa4.66□□□□□ -1.66
CDH13-206ENST00000562601 PSG11Q9UQ72 335 aa4.66□□□□□ -1.66
CDH13-206ENST00000562601 TBL2Q9Y4P3 447 aaKnown RBP4.66□□□□□ -1.66
CDH13-206ENST00000562601 VWFP04275 2813 aa4.66□□□□□ -1.66
CDH13-206ENST00000562601 A0A075B6Q4 140 aa4.65□□□□□ -1.67
CDH13-206ENST00000562601 TRAV1-2A0A0B4J238 106 aa4.65□□□□□ -1.67
CDH13-206ENST00000562601 A6NDX4 124 aa4.65□□□□□ -1.67
CDH13-206ENST00000562601 FAM90A10PA6NDY2 464 aa4.65□□□□□ -1.67
CDH13-206ENST00000562601 FAM90A18PA6NE21 464 aa4.65□□□□□ -1.67
CDH13-206ENST00000562601 FAM90A16PA6NEW6 464 aa4.65□□□□□ -1.67
CDH13-206ENST00000562601 FAM90A20PA6NIJ5 464 aa4.65□□□□□ -1.67
CDH13-206ENST00000562601 FAM90A7PA6NKC0 464 aa4.65□□□□□ -1.67
CDH13-206ENST00000562601 SH2D7A6NKC9 451 aaPredicted RBP4.65□□□□□ -1.67
CDH13-206ENST00000562601 FAM90A22PA8MWA6 464 aa4.65□□□□□ -1.67
CDH13-206ENST00000562601 FAM90A12PA8MX19 464 aa4.65□□□□□ -1.67
CDH13-206ENST00000562601 FAM90A5PA8MXJ8 464 aa4.65□□□□□ -1.67
CDH13-206ENST00000562601 FAM90A23PA8MXZ1 464 aa4.65□□□□□ -1.67
CDH13-206ENST00000562601 LEUTXA8MZ59 168 aa4.65□□□□□ -1.67
CDH13-206ENST00000562601 NPIPB11E5RHQ5 1161 aa4.65□□□□□ -1.67
CDH13-206ENST00000562601 LY6LH3BQJ8 138 aa4.65□□□□□ -1.67
CDH13-206ENST00000562601 BUB1B-PAK6H3BSN5 160 aa4.65□□□□□ -1.67
CDH13-206ENST00000562601 F2RL2O00254 374 aa4.65□□□□□ -1.67
CDH13-206ENST00000562601 SLC31A2O15432 143 aa4.65□□□□□ -1.67
CDH13-206ENST00000562601 RRP9O43818 475 aaKnown RBP4.65□□□□□ -1.67
CDH13-206ENST00000562601 IGLV1-47P01700 117 aa4.65□□□□□ -1.67
CDH13-206ENST00000562601 HBZP02008 142 aa4.65□□□□□ -1.67
CDH13-206ENST00000562601 FAM90A15PP0C7V4 464 aa4.65□□□□□ -1.67
CDH13-206ENST00000562601 FAM90A13PP0C7W8 464 aa4.65□□□□□ -1.67
CDH13-206ENST00000562601 FAM90A14PP0C7W9 464 aa4.65□□□□□ -1.67
CDH13-206ENST00000562601 FAM90A24PP0C7X0 464 aa4.65□□□□□ -1.67
CDH13-206ENST00000562601 GZMHP20718 246 aa4.65□□□□□ -1.67
CDH13-206ENST00000562601 CD34P28906 385 aa4.65□□□□□ -1.67
CDH13-206ENST00000562601 SDC2P34741 201 aa4.65□□□□□ -1.67
CDH13-206ENST00000562601 REG1BP48304 166 aa4.65□□□□□ -1.67
CDH13-206ENST00000562601 ZNF134P52741 427 aa4.65□□□□□ -1.67
CDH13-206ENST00000562601 TMEM50BP56557 158 aa4.65□□□□□ -1.67
CDH13-206ENST00000562601 LOXL3P58215 753 aa4.65□□□□□ -1.67
CDH13-206ENST00000562601 LSM3P62310 102 aaKnown RBP4.65□□□□□ -1.67
CDH13-206ENST00000562601 PAX5Q02548 391 aa4.65□□□□□ -1.67
CDH13-206ENST00000562601 MXD1Q05195 221 aa4.65□□□□□ -1.67
CDH13-206ENST00000562601 HABP2Q14520 560 aaPredicted RBP4.65□□□□□ -1.67
CDH13-206ENST00000562601 GNMTQ14749 295 aa4.65□□□□□ -1.67
CDH13-206ENST00000562601 HLA-DRB5Q30154 266 aa4.65□□□□□ -1.67
CDH13-206ENST00000562601 MOGAT2Q3SYC2 334 aa4.65□□□□□ -1.67
CDH13-206ENST00000562601 TPTE2P1Q5T6R2 138 aa4.65□□□□□ -1.67
CDH13-206ENST00000562601 MINOS1Q5TGZ0 78 aa4.65□□□□□ -1.67
CDH13-206ENST00000562601 OLFML2AQ68BL7 652 aa4.65□□□□□ -1.67
CDH13-206ENST00000562601 OR2W3Q7Z3T1 314 aa4.65□□□□□ -1.67
CDH13-206ENST00000562601 OR52L2PQ8NGH6 319 aa4.65□□□□□ -1.67
CDH13-206ENST00000562601 OR10X1Q8NGY0 326 aa4.65□□□□□ -1.67
CDH13-206ENST00000562601 OR4F5Q8NH21 305 aa4.65□□□□□ -1.67
CDH13-206ENST00000562601 OR9G1Q8NH87 305 aa4.65□□□□□ -1.67
CDH13-206ENST00000562601 LINC01006Q8NI28 216 aa4.65□□□□□ -1.67
CDH13-206ENST00000562601 ZNF596Q8TC21 504 aa4.65□□□□□ -1.67
CDH13-206ENST00000562601 ARHGAP5-AS1Q96IT6 56 aa4.65□□□□□ -1.67
CDH13-206ENST00000562601 CENPOQ9BU64 300 aa4.65□□□□□ -1.67
CDH13-206ENST00000562601 TM2D1Q9BX74 207 aa4.65□□□□□ -1.67
CDH13-206ENST00000562601 PECRQ9BY49 303 aa4.65□□□□□ -1.67
CDH13-206ENST00000562601 MMP28Q9H239 520 aa4.65□□□□□ -1.67
CDH13-206ENST00000562601 BEX1Q9HBH7 125 aa4.65□□□□□ -1.67
CDH13-206ENST00000562601 TAF9BQ9HBM6 251 aa4.65□□□□□ -1.67
CDH13-206ENST00000562601 PLEKHJ1Q9NW61 149 aa4.65□□□□□ -1.67
CDH13-206ENST00000562601 DPM3Q9P2X0 92 aa4.65□□□□□ -1.67
CDH13-206ENST00000562601 AK3Q9UIJ7 227 aa4.65□□□□□ -1.67
CDH13-206ENST00000562601 SSR3Q9UNL2 185 aa4.65□□□□□ -1.67
CDH13-206ENST00000562601 MINOS1-NBL1R4GNA1 71 aa4.65□□□□□ -1.67
CDH13-206ENST00000562601 TRRAPQ9Y4A5 3859 aa4.65□□□□□ -1.67
CDH13-206ENST00000562601 A0A087WXM4 84 aa4.64□□□□□ -1.67
CDH13-206ENST00000562601 A0A087X0M5 115 aa4.64□□□□□ -1.67
CDH13-206ENST00000562601 IGHV3-72A0A0B4J1Y9 119 aa4.64□□□□□ -1.67
CDH13-206ENST00000562601 A0A1B0GX30 115 aa4.64□□□□□ -1.67
CDH13-206ENST00000562601 GAGE12BA1L429 117 aa4.64□□□□□ -1.67
CDH13-206ENST00000562601 CLPSL1A2RUU4 121 aa4.64□□□□□ -1.67
CDH13-206ENST00000562601 GAGE12HA6NDE8 117 aa4.64□□□□□ -1.67
CDH13-206ENST00000562601 IFITM5A6NNB3 132 aa4.64□□□□□ -1.67
CDH13-206ENST00000562601 FOXI3A8MTJ6 420 aaPredicted RBP4.64□□□□□ -1.67
CDH13-206ENST00000562601 VGLL3A8MV65 326 aa4.64□□□□□ -1.67
CDH13-206ENST00000562601 LDLRAD4O15165 306 aa4.64□□□□□ -1.67
CDH13-206ENST00000562601 SPINT2O43291 252 aa4.64□□□□□ -1.67
CDH13-206ENST00000562601 ORC5O43913 435 aa4.64□□□□□ -1.67
CDH13-206ENST00000562601 NDUFA7O95182 113 aa4.64□□□□□ -1.67
CDH13-206ENST00000562601 TNFAIP8O95379 198 aa4.64□□□□□ -1.67
CDH13-206ENST00000562601 GLAP06280 429 aa4.64□□□□□ -1.67
CDH13-206ENST00000562601 GNB3P16520 340 aa4.64□□□□□ -1.67
CDH13-206ENST00000562601 FGF9P31371 208 aaPredicted RBP4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms