RNA–Protein interactions for RNA: ENST00000561940.1

SMG1-204, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 964 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-204ENST00000561940 RAD50Q92878 1312 aa3.21□□□□□ -1.89
SMG1-204ENST00000561940 ZNF236Q9UL36 1845 aa3.21□□□□□ -1.89
SMG1-204ENST00000561940 PTPRFP10586 1907 aa3.21□□□□□ -1.9
SMG1-204ENST00000561940 DSPP15924 2871 aaKnown RBP3.21□□□□□ -1.9
SMG1-204ENST00000561940 OR6C70A6NIJ9 312 aa3.21□□□□□ -1.9
SMG1-204ENST00000561940 PLPP3O14495 311 aa3.21□□□□□ -1.9
SMG1-204ENST00000561940 MYO1DO94832 1006 aa3.21□□□□□ -1.9
SMG1-204ENST00000561940 LDOC1O95751 146 aaPredicted RBP3.21□□□□□ -1.9
SMG1-204ENST00000561940 HLA-DMAP28067 261 aa3.21□□□□□ -1.9
SMG1-204ENST00000561940 BNIP2Q12982 314 aa3.21□□□□□ -1.9
SMG1-204ENST00000561940 TRIP13Q15645 432 aaPredicted RBP3.21□□□□□ -1.9
SMG1-204ENST00000561940 ERICH5Q6P6B1 374 aa3.21□□□□□ -1.9
SMG1-204ENST00000561940 LINC00304Q8N9R0 145 aa3.21□□□□□ -1.9
SMG1-204ENST00000561940 NELFBQ8WX92 580 aa3.21□□□□□ -1.9
SMG1-204ENST00000561940 CLDN23Q96B33 292 aa3.21□□□□□ -1.9
SMG1-204ENST00000561940 TSGA10Q9BZW7 698 aa3.21□□□□□ -1.9
SMG1-204ENST00000561940 CHMP4BQ9H444 224 aaKnown RBP3.21□□□□□ -1.9
SMG1-204ENST00000561940 DIABLOQ9NR28 239 aa3.21□□□□□ -1.9
SMG1-204ENST00000561940 RALGAPA2Q2PPJ7 1873 aa3.2□□□□□ -1.9
SMG1-204ENST00000561940 CDK5RAP2Q96SN8 1893 aa3.2□□□□□ -1.9
SMG1-204ENST00000561940 ITPR1Q14643 2758 aa3.2□□□□□ -1.9
SMG1-204ENST00000561940 SDK2Q58EX2 2172 aa3.2□□□□□ -1.9
SMG1-204ENST00000561940 LINC00854A0A1B0GVQ3 168 aa3.2□□□□□ -1.9
SMG1-204ENST00000561940 F8VP50 259 aa3.2□□□□□ -1.9
SMG1-204ENST00000561940 K7EPK0 472 aa3.2□□□□□ -1.9
SMG1-204ENST00000561940 POLR3GO15318 223 aaPredicted RBP3.2□□□□□ -1.9
SMG1-204ENST00000561940 RGS5O15539 181 aa3.2□□□□□ -1.9
SMG1-204ENST00000561940 SLC37A4O43826 429 aa3.2□□□□□ -1.9
SMG1-204ENST00000561940 CECR9P0C854 216 aa3.2□□□□□ -1.9
SMG1-204ENST00000561940 RPA3P35244 121 aaPredicted RBP3.2□□□□□ -1.9
SMG1-204ENST00000561940 TTPAP49638 278 aa3.2□□□□□ -1.9
SMG1-204ENST00000561940 NUDT2P50583 147 aa3.2□□□□□ -1.9
SMG1-204ENST00000561940 TPBGQ13641 420 aa3.2□□□□□ -1.9
SMG1-204ENST00000561940 CEACAM21Q3KPI0 293 aa3.2□□□□□ -1.9
SMG1-204ENST00000561940 LDLRAD2Q5SZI1 272 aa3.2□□□□□ -1.9
SMG1-204ENST00000561940 NT5DC3Q86UY8 548 aa3.2□□□□□ -1.9
SMG1-204ENST00000561940 C17orf78Q8N4C9 275 aa3.2□□□□□ -1.9
SMG1-204ENST00000561940 YPEL4Q96NS1 127 aa3.2□□□□□ -1.9
SMG1-204ENST00000561940 CYTH2Q99418 400 aa3.2□□□□□ -1.9
SMG1-204ENST00000561940 SLC25A31Q9H0C2 315 aa3.2□□□□□ -1.9
SMG1-204ENST00000561940 INIPQ9NRY2 104 aa3.2□□□□□ -1.9
SMG1-204ENST00000561940 SNX24Q9Y343 169 aa3.2□□□□□ -1.9
SMG1-204ENST00000561940 UBR5O95071 2799 aaPredicted RBP3.2□□□□□ -1.9
SMG1-204ENST00000561940 PTPRQQ9UMZ3 2332 aa3.2□□□□□ -1.9
SMG1-204ENST00000561940 TEX15Q9BXT5 2789 aa3.19□□□□□ -1.9
SMG1-204ENST00000561940 FRYLO94915 3013 aa3.19□□□□□ -1.9
SMG1-204ENST00000561940 IGKV1OR2-108A0A075B7D4 117 aa3.19□□□□□ -1.9
SMG1-204ENST00000561940 IGHG2P01859 326 aa3.19□□□□□ -1.9
SMG1-204ENST00000561940 TRGV3P03979 118 aa3.19□□□□□ -1.9
SMG1-204ENST00000561940 INAFM2P0DMQ5 153 aa3.19□□□□□ -1.9
SMG1-204ENST00000561940 ZNF35P13682 527 aa3.19□□□□□ -1.9
SMG1-204ENST00000561940 NQO2P16083 231 aa3.19□□□□□ -1.9
SMG1-204ENST00000561940 TSPOP30536 169 aa3.19□□□□□ -1.9
SMG1-204ENST00000561940 HOXA6P31267 233 aa3.19□□□□□ -1.9
SMG1-204ENST00000561940 GTF2H1P32780 548 aa3.19□□□□□ -1.9
SMG1-204ENST00000561940 CD151P48509 253 aa3.19□□□□□ -1.9
SMG1-204ENST00000561940 OR2B6P58173 313 aa3.19□□□□□ -1.9
SMG1-204ENST00000561940 MARCH3Q86UD3 253 aa3.19□□□□□ -1.9
SMG1-204ENST00000561940 LRRC6Q86X45 466 aa3.19□□□□□ -1.9
SMG1-204ENST00000561940 TMEM25Q86YD3 366 aa3.19□□□□□ -1.9
SMG1-204ENST00000561940 ACBD4Q8NC06 268 aa3.19□□□□□ -1.9
SMG1-204ENST00000561940 C2orf15Q8WU43 125 aaKnown RBP3.19□□□□□ -1.9
SMG1-204ENST00000561940 ANAPC13Q9BS18 74 aa3.19□□□□□ -1.9
SMG1-204ENST00000561940 PLA2G12AQ9BZM1 189 aa3.19□□□□□ -1.9
SMG1-204ENST00000561940 ULBP1Q9BZM6 244 aa3.19□□□□□ -1.9
SMG1-204ENST00000561940 DOCK1Q14185 1865 aa3.19□□□□□ -1.9
SMG1-204ENST00000561940 URB1O60287 2271 aaKnown RBP3.19□□□□□ -1.9
SMG1-204ENST00000561940 DMXL2Q8TDJ6 3036 aa3.19□□□□□ -1.9
SMG1-204ENST00000561940 SIP14410 1827 aa3.19□□□□□ -1.9
SMG1-204ENST00000561940 NRCAMQ92823 1304 aa3.19□□□□□ -1.9
SMG1-204ENST00000561940 ITPR3Q14573 2671 aa3.18□□□□□ -1.9
SMG1-204ENST00000561940 MYBPHLA2RUH7 354 aa3.18□□□□□ -1.9
SMG1-204ENST00000561940 IGLL5B9A064 214 aa3.18□□□□□ -1.9
SMG1-204ENST00000561940 RNASEK-C17orf49H0YIS7 233 aa3.18□□□□□ -1.9
SMG1-204ENST00000561940 M0QXV9 152 aa3.18□□□□□ -1.9
SMG1-204ENST00000561940 UBDO15205 165 aa3.18□□□□□ -1.9
SMG1-204ENST00000561940 SOD3P08294 240 aa3.18□□□□□ -1.9
SMG1-204ENST00000561940 TGFBR2P37173 567 aa3.18□□□□□ -1.9
SMG1-204ENST00000561940 PLTPP55058 493 aa3.18□□□□□ -1.9
SMG1-204ENST00000561940 OR10A3P58181 314 aa3.18□□□□□ -1.9
SMG1-204ENST00000561940 FLI1Q01543 452 aaPredicted RBP3.18□□□□□ -1.9
SMG1-204ENST00000561940 CD164Q04900 197 aa3.18□□□□□ -1.9
SMG1-204ENST00000561940 BAXQ07812 192 aa3.18□□□□□ -1.9
SMG1-204ENST00000561940 XRCC4Q13426 336 aa3.18□□□□□ -1.9
SMG1-204ENST00000561940 BSXQ3C1V8 233 aa3.18□□□□□ -1.9
SMG1-204ENST00000561940 GLYATQ6IB77 296 aa3.18□□□□□ -1.9
SMG1-204ENST00000561940 ADM2Q7Z4H4 148 aa3.18□□□□□ -1.9
SMG1-204ENST00000561940 GATD1Q8NB37 220 aa3.18□□□□□ -1.9
SMG1-204ENST00000561940 TET1Q8NFU7 2136 aa3.18□□□□□ -1.9
SMG1-204ENST00000561940 OR2M3Q8NG83 312 aa3.18□□□□□ -1.9
SMG1-204ENST00000561940 TWIST2Q8WVJ9 160 aa3.18□□□□□ -1.9
SMG1-204ENST00000561940 SERPINB11Q96P15 392 aa3.18□□□□□ -1.9
SMG1-204ENST00000561940 FBXL15Q9H469 300 aa3.18□□□□□ -1.9
SMG1-204ENST00000561940 TRIM45Q9H8W5 580 aaPredicted RBP3.18□□□□□ -1.9
SMG1-204ENST00000561940 TAS2R13Q9NYV9 303 aa3.18□□□□□ -1.9
SMG1-204ENST00000561940 GMEB1Q9Y692 573 aa3.18□□□□□ -1.9
SMG1-204ENST00000561940 USH1CQ9Y6N9 552 aa3.18□□□□□ -1.9
SMG1-204ENST00000561940 FANCMQ8IYD8 2048 aa3.18□□□□□ -1.9
SMG1-204ENST00000561940 ACACAQ13085 2346 aa3.18□□□□□ -1.9
SMG1-204ENST00000561940 A0A1B0GUL6 1792 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms