RNA–Protein interactions for RNA: ENST00000561673.1

CLK3-205, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 639 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-205ENST00000561673 GALMQ96C23 342 aa8.09□□□□□ -1.11
CLK3-205ENST00000561673 GFI1Q99684 422 aa8.09□□□□□ -1.11
CLK3-205ENST00000561673 RASL11BQ9BPW5 248 aa8.09□□□□□ -1.11
CLK3-205ENST00000561673 HSPB9Q9BQS6 159 aa8.09□□□□□ -1.11
CLK3-205ENST00000561673 NICN1Q9BSH3 213 aa8.09□□□□□ -1.11
CLK3-205ENST00000561673 ABHD14AQ9BUJ0 271 aa8.09□□□□□ -1.11
CLK3-205ENST00000561673 TM2D1Q9BX74 207 aa8.09□□□□□ -1.11
CLK3-205ENST00000561673 TMEM59Q9BXS4 323 aa8.09□□□□□ -1.11
CLK3-205ENST00000561673 DUSP21Q9H596 190 aa8.09□□□□□ -1.11
CLK3-205ENST00000561673 JPT1Q9UK76 154 aa8.09□□□□□ -1.11
CLK3-205ENST00000561673 TPRKBQ9Y3C4 175 aa8.09□□□□□ -1.11
CLK3-205ENST00000561673 LRRC42Q9Y546 428 aa8.09□□□□□ -1.11
CLK3-205ENST00000561673 A0A0A6YYD4 124 aa8.08□□□□□ -1.12
CLK3-205ENST00000561673 NUDT19A8MXV4 375 aa8.08□□□□□ -1.12
CLK3-205ENST00000561673 RGS10O43665 173 aa8.08□□□□□ -1.12
CLK3-205ENST00000561673 YPEL1O60688 119 aa8.08□□□□□ -1.12
CLK3-205ENST00000561673 DUS4LO95620 317 aaKnown RBP8.08□□□□□ -1.12
CLK3-205ENST00000561673 BPNT1O95861 308 aa8.08□□□□□ -1.12
CLK3-205ENST00000561673 RPLP1P05386 114 aaKnown RBP8.08□□□□□ -1.12
CLK3-205ENST00000561673 BLVRBP30043 206 aaPredicted RBP8.08□□□□□ -1.12
CLK3-205ENST00000561673 OR3A3P47888 321 aa8.08□□□□□ -1.12
CLK3-205ENST00000561673 RPS25P62851 125 aaKnown RBP8.08□□□□□ -1.12
CLK3-205ENST00000561673 LSAMPQ13449 338 aa8.08□□□□□ -1.12
CLK3-205ENST00000561673 TPBGQ13641 420 aa8.08□□□□□ -1.12
CLK3-205ENST00000561673 P2RY14Q15391 338 aa8.08□□□□□ -1.12
CLK3-205ENST00000561673 HMGN3Q15651 99 aa8.08□□□□□ -1.12
CLK3-205ENST00000561673 LY6G6FQ5SQ64 297 aa8.08□□□□□ -1.12
CLK3-205ENST00000561673 LCNL1Q6ZST4 164 aa8.08□□□□□ -1.12
CLK3-205ENST00000561673 KLHL30-AS1Q8NEE0 82 aa8.08□□□□□ -1.12
CLK3-205ENST00000561673 OR6M1Q8NGM8 313 aa8.08□□□□□ -1.12
CLK3-205ENST00000561673 RITA1Q96K30 269 aa8.08□□□□□ -1.12
CLK3-205ENST00000561673 YPEL2Q96QA6 119 aa8.08□□□□□ -1.12
CLK3-205ENST00000561673 GON7Q9BXV9 100 aa8.08□□□□□ -1.12
CLK3-205ENST00000561673 ANKRD60Q9BZ19 345 aa8.08□□□□□ -1.12
CLK3-205ENST00000561673 PLEKHJ1Q9NW61 149 aa8.08□□□□□ -1.12
CLK3-205ENST00000561673 COL7A1Q02388 2944 aa8.07□□□□□ -1.12
CLK3-205ENST00000561673 SOCS1O15524 211 aa8.07□□□□□ -1.12
CLK3-205ENST00000561673 RGS11O94810 467 aa8.07□□□□□ -1.12
CLK3-205ENST00000561673 NAPSAO96009 420 aa8.07□□□□□ -1.12
CLK3-205ENST00000561673 SLC2A2P11168 524 aaPredicted RBP8.07□□□□□ -1.12
CLK3-205ENST00000561673 ARSBP15848 533 aa8.07□□□□□ -1.12
CLK3-205ENST00000561673 CPEP16870 476 aa8.07□□□□□ -1.12
CLK3-205ENST00000561673 CRHBPP24387 322 aa8.07□□□□□ -1.12
CLK3-205ENST00000561673 SLC6A1P30531 599 aa8.07□□□□□ -1.12
CLK3-205ENST00000561673 HOXD3P31249 432 aaPredicted RBP8.07□□□□□ -1.12
CLK3-205ENST00000561673 SOX6P35712 828 aa8.07□□□□□ -1.12
CLK3-205ENST00000561673 MYCNOSP40205 109 aa8.07□□□□□ -1.12
CLK3-205ENST00000561673 CFHR3Q02985 330 aa8.07□□□□□ -1.12
CLK3-205ENST00000561673 EGFEM1PQ0D2K5 195 aa8.07□□□□□ -1.12
CLK3-205ENST00000561673 FOXE3Q13461 319 aa8.07□□□□□ -1.12
CLK3-205ENST00000561673 ZNF880Q6PDB4 577 aa8.07□□□□□ -1.12
CLK3-205ENST00000561673 ZNF833PQ6ZTB9 187 aa8.07□□□□□ -1.12
CLK3-205ENST00000561673 ZNF695Q8IW36 515 aa8.07□□□□□ -1.12
CLK3-205ENST00000561673 LINC00528Q8N1L1 170 aa8.07□□□□□ -1.12
CLK3-205ENST00000561673 SVOPQ8N4V2 548 aa8.07□□□□□ -1.12
CLK3-205ENST00000561673 FAM89BQ8N5H3 189 aa8.07□□□□□ -1.12
CLK3-205ENST00000561673 RNF152Q8N8N0 203 aa8.07□□□□□ -1.12
CLK3-205ENST00000561673 OR2AK2Q8NG84 335 aa8.07□□□□□ -1.12
CLK3-205ENST00000561673 IL1F10Q8WWZ1 152 aa8.07□□□□□ -1.12
CLK3-205ENST00000561673 RAX2Q96IS3 184 aa8.07□□□□□ -1.12
CLK3-205ENST00000561673 DUX3Q96PT4 197 aa8.07□□□□□ -1.12
CLK3-205ENST00000561673 P2RX4Q99571 388 aa8.07□□□□□ -1.12
CLK3-205ENST00000561673 NABP2Q9BQ15 211 aa8.07□□□□□ -1.12
CLK3-205ENST00000561673 MRPL20Q9BYC9 149 aaKnown RBP8.07□□□□□ -1.12
CLK3-205ENST00000561673 CCDC90BQ9GZT6 254 aa8.07□□□□□ -1.12
CLK3-205ENST00000561673 LPAR5Q9H1C0 372 aa8.07□□□□□ -1.12
CLK3-205ENST00000561673 CHMP1AQ9HD42 196 aaPredicted RBP8.07□□□□□ -1.12
CLK3-205ENST00000561673 ISYNA1Q9NPH2 558 aa8.07□□□□□ -1.12
CLK3-205ENST00000561673 ABRACLQ9P1F3 81 aa8.07□□□□□ -1.12
CLK3-205ENST00000561673 AK6Q9Y3D8 172 aaKnown RBP8.07□□□□□ -1.12
CLK3-205ENST00000561673 SAA2-SAA4A0A096LPE2 208 aa8.06□□□□□ -1.12
CLK3-205ENST00000561673 WI2-2373I1.2A0A1W2PRP0 233 aa8.06□□□□□ -1.12
CLK3-205ENST00000561673 K7EIL1 84 aa8.06□□□□□ -1.12
CLK3-205ENST00000561673 CCL24O00175 119 aa8.06□□□□□ -1.12
CLK3-205ENST00000561673 SLC17A2O00624 439 aa8.06□□□□□ -1.12
CLK3-205ENST00000561673 RRP9O43818 475 aaKnown RBP8.06□□□□□ -1.12
CLK3-205ENST00000561673 IGHG4P01861 327 aa8.06□□□□□ -1.12
CLK3-205ENST00000561673 IGF1P05019 195 aa8.06□□□□□ -1.12
CLK3-205ENST00000561673 SAA2P0DJI9 122 aaPredicted RBP8.06□□□□□ -1.12
CLK3-205ENST00000561673 CNTFRP26992 372 aa8.06□□□□□ -1.12
CLK3-205ENST00000561673 MAP2K4P45985 399 aa8.06□□□□□ -1.12
CLK3-205ENST00000561673 TMEM50BP56557 158 aa8.06□□□□□ -1.12
CLK3-205ENST00000561673 ACTBP60709 375 aa8.06□□□□□ -1.12
CLK3-205ENST00000561673 FABP5Q01469 135 aa8.06□□□□□ -1.12
CLK3-205ENST00000561673 MLLT11Q13015 90 aaPredicted RBP8.06□□□□□ -1.12
CLK3-205ENST00000561673 MMDQ15546 238 aa8.06□□□□□ -1.12
CLK3-205ENST00000561673 TRAM1Q15629 374 aa8.06□□□□□ -1.12
CLK3-205ENST00000561673 CXorf66Q5JRM2 361 aaPredicted RBP8.06□□□□□ -1.12
CLK3-205ENST00000561673 PRSS48Q7RTY5 328 aa8.06□□□□□ -1.12
CLK3-205ENST00000561673 SETD6Q8TBK2 473 aa8.06□□□□□ -1.12
CLK3-205ENST00000561673 MGLLQ99685 303 aa8.06□□□□□ -1.12
CLK3-205ENST00000561673 HDHD3Q9BSH5 251 aaPredicted RBP8.06□□□□□ -1.12
CLK3-205ENST00000561673 IFI27L2Q9H2X8 130 aa8.06□□□□□ -1.12
CLK3-205ENST00000561673 PLGRKTQ9HBL7 147 aa8.06□□□□□ -1.12
CLK3-205ENST00000561673 ZNF107Q9UII5 783 aaPredicted RBP8.06□□□□□ -1.12
CLK3-205ENST00000561673 AK3Q9UIJ7 227 aa8.06□□□□□ -1.12
CLK3-205ENST00000561673 TRBV6-6A0A0A6YYG2 114 aa8.05□□□□□ -1.12
CLK3-205ENST00000561673 FOXI3A8MTJ6 420 aaPredicted RBP8.05□□□□□ -1.12
CLK3-205ENST00000561673 ST8SIA5O15466 376 aa8.05□□□□□ -1.12
CLK3-205ENST00000561673 ARL6IP5O75915 188 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms