RNA–Protein interactions for RNA: ENST00000561276.5

LRRC28-221, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 967 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-221ENST00000561276 OR1A1Q9P1Q5 309 aa8.34□□□□□ -1.07
LRRC28-221ENST00000561276 ZNRD1Q9P1U0 126 aa8.34□□□□□ -1.07
LRRC28-221ENST00000561276 TBL2Q9Y4P3 447 aaKnown RBP8.34□□□□□ -1.07
LRRC28-221ENST00000561276 CSPG4Q6UVK1 2322 aa8.34□□□□□ -1.08
LRRC28-221ENST00000561276 MDFIC2A0A1B0GVS7 189 aa8.33□□□□□ -1.08
LRRC28-221ENST00000561276 LEUTXA8MZ59 168 aa8.33□□□□□ -1.08
LRRC28-221ENST00000561276 GABARAPH6UMI1 98 aa8.33□□□□□ -1.08
LRRC28-221ENST00000561276 CTDSPLO15194 276 aa8.33□□□□□ -1.08
LRRC28-221ENST00000561276 SLC31A2O15432 143 aa8.33□□□□□ -1.08
LRRC28-221ENST00000561276 DIRAS3O95661 229 aa8.33□□□□□ -1.08
LRRC28-221ENST00000561276 PAX6P26367 422 aa8.33□□□□□ -1.08
LRRC28-221ENST00000561276 CEACAM3P40198 252 aa8.33□□□□□ -1.08
LRRC28-221ENST00000561276 ETV6P41212 452 aa8.33□□□□□ -1.08
LRRC28-221ENST00000561276 RFX2P48378 723 aa8.33□□□□□ -1.08
LRRC28-221ENST00000561276 ARPC4P59998 168 aa8.33□□□□□ -1.08
LRRC28-221ENST00000561276 MRPS10P82664 201 aaKnown RBP8.33□□□□□ -1.08
LRRC28-221ENST00000561276 DGCR2P98153 550 aa8.33□□□□□ -1.08
LRRC28-221ENST00000561276 SSX2Q16385 188 aa8.33□□□□□ -1.08
LRRC28-221ENST00000561276 SPANXN2Q5MJ10 180 aa8.33□□□□□ -1.08
LRRC28-221ENST00000561276 MINOS1Q5TGZ0 78 aa8.33□□□□□ -1.08
LRRC28-221ENST00000561276 SLC25A48Q6ZT89 311 aaKnown RBP8.33□□□□□ -1.08
LRRC28-221ENST00000561276 DYNAPQ8N1N2 210 aa8.33□□□□□ -1.08
LRRC28-221ENST00000561276 LINC00311Q8N616 119 aa8.33□□□□□ -1.08
LRRC28-221ENST00000561276 OR5AP2Q8NGF4 316 aa8.33□□□□□ -1.08
LRRC28-221ENST00000561276 OR10X1Q8NGY0 326 aa8.33□□□□□ -1.08
LRRC28-221ENST00000561276 CREB3L1Q96BA8 519 aa8.33□□□□□ -1.08
LRRC28-221ENST00000561276 ZNF48Q96MX3 618 aaPredicted RBP8.33□□□□□ -1.08
LRRC28-221ENST00000561276 SLC6A7Q99884 636 aa8.33□□□□□ -1.08
LRRC28-221ENST00000561276 GINS4Q9BRT9 223 aa8.33□□□□□ -1.08
LRRC28-221ENST00000561276 CABLES2Q9BTV7 478 aa8.33□□□□□ -1.08
LRRC28-221ENST00000561276 TOLLIPQ9H0E2 274 aa8.33□□□□□ -1.08
LRRC28-221ENST00000561276 C11orf54Q9H0W9 315 aaPredicted RBP8.33□□□□□ -1.08
LRRC28-221ENST00000561276 NECAP2Q9NVZ3 263 aa8.33□□□□□ -1.08
LRRC28-221ENST00000561276 RDH8Q9NYR8 311 aa8.33□□□□□ -1.08
LRRC28-221ENST00000561276 DPM3Q9P2X0 92 aa8.33□□□□□ -1.08
LRRC28-221ENST00000561276 MTFP1Q9UDX5 166 aa8.33□□□□□ -1.08
LRRC28-221ENST00000561276 ANAPC10Q9UM13 185 aa8.33□□□□□ -1.08
LRRC28-221ENST00000561276 HILPDAQ9Y5L2 63 aa8.33□□□□□ -1.08
LRRC28-221ENST00000561276 MINOS1-NBL1R4GNA1 71 aa8.33□□□□□ -1.08
LRRC28-221ENST00000561276 V9GYH0 126 aa8.33□□□□□ -1.08
LRRC28-221ENST00000561276 MXRA5Q9NR99 2828 aa8.33□□□□□ -1.08
LRRC28-221ENST00000561276 LY6LH3BQJ8 138 aa8.32□□□□□ -1.08
LRRC28-221ENST00000561276 PMP2P02689 132 aa8.32□□□□□ -1.08
LRRC28-221ENST00000561276 FBP1P09467 338 aa8.32□□□□□ -1.08
LRRC28-221ENST00000561276 NFYAP23511 347 aaPredicted RBP8.32□□□□□ -1.08
LRRC28-221ENST00000561276 PTBP1P26599 531 aaKnown RBP eCLIP8.32□□□□□ -1.08
LRRC28-221ENST00000561276 HLA-DMAP28067 261 aa8.32□□□□□ -1.08
LRRC28-221ENST00000561276 OR3A3P47888 321 aa8.32□□□□□ -1.08
LRRC28-221ENST00000561276 CDK10Q15131 360 aa8.32□□□□□ -1.08
LRRC28-221ENST00000561276 ZNF79Q15937 498 aa8.32□□□□□ -1.08
LRRC28-221ENST00000561276 PYDC2Q56P42 97 aa8.32□□□□□ -1.08
LRRC28-221ENST00000561276 Q6YL49 198 aa8.32□□□□□ -1.08
LRRC28-221ENST00000561276 H1FOOQ8IZA3 346 aaPredicted RBP8.32□□□□□ -1.08
LRRC28-221ENST00000561276 SIGLECL1Q8N7X8 197 aa8.32□□□□□ -1.08
LRRC28-221ENST00000561276 OR2AK2Q8NG84 335 aa8.32□□□□□ -1.08
LRRC28-221ENST00000561276 SMIM4Q8WVI0 70 aa8.32□□□□□ -1.08
LRRC28-221ENST00000561276 EDARADDQ8WWZ3 215 aa8.32□□□□□ -1.08
LRRC28-221ENST00000561276 AGMATQ9BSE5 352 aa8.32□□□□□ -1.08
LRRC28-221ENST00000561276 PARP12Q9H0J9 701 aaKnown RBP8.32□□□□□ -1.08
LRRC28-221ENST00000561276 MEGF9Q9H1U4 602 aa8.32□□□□□ -1.08
LRRC28-221ENST00000561276 PRDM13Q9H4Q3 707 aa8.32□□□□□ -1.08
LRRC28-221ENST00000561276 PTTG2Q9NZH5 202 aa8.32□□□□□ -1.08
LRRC28-221ENST00000561276 RNF150Q9ULK6 438 aa8.32□□□□□ -1.08
LRRC28-221ENST00000561276 AMMECR1Q9Y4X0 333 aaPredicted RBP8.32□□□□□ -1.08
LRRC28-221ENST00000561276 ITGB1BP1O14713 200 aa8.31□□□□□ -1.08
LRRC28-221ENST00000561276 GSTZ1O43708 216 aaPredicted RBP8.31□□□□□ -1.08
LRRC28-221ENST00000561276 OR8U9P0C7N5 309 aa8.31□□□□□ -1.08
LRRC28-221ENST00000561276 OR5H8P0DN80 308 aa8.31□□□□□ -1.08
LRRC28-221ENST00000561276 RCVRNP35243 200 aa8.31□□□□□ -1.08
LRRC28-221ENST00000561276 ACTBP60709 375 aa8.31□□□□□ -1.08
LRRC28-221ENST00000561276 ACTG1P63261 375 aa8.31□□□□□ -1.08
LRRC28-221ENST00000561276 SSBP1Q04837 148 aaKnown RBP8.31□□□□□ -1.08
LRRC28-221ENST00000561276 DIAPH2-AS1Q14236 149 aa8.31□□□□□ -1.08
LRRC28-221ENST00000561276 C4orf48Q5BLP8 95 aa8.31□□□□□ -1.08
LRRC28-221ENST00000561276 RBMS3Q6XE24 437 aaKnown RBP8.31□□□□□ -1.08
LRRC28-221ENST00000561276 LINC00299Q6ZSB3 139 aa8.31□□□□□ -1.08
LRRC28-221ENST00000561276 OVCH2Q7RTZ1 564 aa8.31□□□□□ -1.08
LRRC28-221ENST00000561276 ODF3L1Q8IXM7 274 aa8.31□□□□□ -1.08
LRRC28-221ENST00000561276 LYG1Q8N1E2 194 aa8.31□□□□□ -1.08
LRRC28-221ENST00000561276 Q8N402 240 aa8.31□□□□□ -1.08
LRRC28-221ENST00000561276 OR8U1Q8NH10 309 aa8.31□□□□□ -1.08
LRRC28-221ENST00000561276 ZNF418Q8TF45 676 aaPredicted RBP8.31□□□□□ -1.08
LRRC28-221ENST00000561276 ST6GALNAC6Q969X2 333 aa8.31□□□□□ -1.08
LRRC28-221ENST00000561276 ABHD14BQ96IU4 210 aa8.31□□□□□ -1.08
LRRC28-221ENST00000561276 SSX3Q99909 188 aa8.31□□□□□ -1.08
LRRC28-221ENST00000561276 THAP7Q9BT49 309 aaPredicted RBP8.31□□□□□ -1.08
LRRC28-221ENST00000561276 ABHD14AQ9BUJ0 271 aa8.31□□□□□ -1.08
LRRC28-221ENST00000561276 RBM7Q9Y580 266 aaKnown RBP8.31□□□□□ -1.08
LRRC28-221ENST00000561276 HIVEP2P31629 2446 aa8.31□□□□□ -1.08
LRRC28-221ENST00000561276 ZNF736B4DX44 427 aaPredicted RBP8.3□□□□□ -1.08
LRRC28-221ENST00000561276 J3QRK9 145 aa8.3□□□□□ -1.08
LRRC28-221ENST00000561276 LANCL1O43813 399 aa8.3□□□□□ -1.08
LRRC28-221ENST00000561276 CD3DP04234 171 aa8.3□□□□□ -1.08
LRRC28-221ENST00000561276 GAPDHP04406 335 aaKnown RBP8.3□□□□□ -1.08
LRRC28-221ENST00000561276 IL3RAP26951 378 aa8.3□□□□□ -1.08
LRRC28-221ENST00000561276 FCGR2CP31995 323 aa8.3□□□□□ -1.08
LRRC28-221ENST00000561276 HRH1P35367 487 aa8.3□□□□□ -1.08
LRRC28-221ENST00000561276 IER3P46695 156 aa8.3□□□□□ -1.08
LRRC28-221ENST00000561276 RAB7AP51149 207 aa8.3□□□□□ -1.08
LRRC28-221ENST00000561276 RAB13P51153 203 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms